RNA–Protein interactions for RNA: ENST00000630499.2

SRRM2-231, Transcript of serine/arginine repetitive matrix 2, human

TSL 1 (best) BASIC

Gene SRRM2, Length 1,207 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM2-231	ENST00000630499	FBXO46	Q6PJ61	603 aa	Predicted RBP	28.05	■■■□□ 2.08
SRRM2-231	ENST00000630499	SSH1	Q8WYL5	1049 aa		28.05	■■■□□ 2.08
SRRM2-231	ENST00000630499	USP44	Q9H0E7	712 aa		28.05	■■■□□ 2.08
SRRM2-231	ENST00000630499	TDRD3	Q9H7E2	651 aa	Known RBP	28.05	■■■□□ 2.08
SRRM2-231	ENST00000630499	TESPA1	A2RU30	521 aa	Predicted RBP	28.03	■■■□□ 2.08
SRRM2-231	ENST00000630499	PDE8B	O95263	885 aa		28.03	■■■□□ 2.08
SRRM2-231	ENST00000630499	CRK	P46108	304 aa		28.03	■■■□□ 2.08
SRRM2-231	ENST00000630499	IREB2	P48200	963 aa	Known RBP	28.03	■■■□□ 2.08
SRRM2-231	ENST00000630499	TNFAIP1	Q13829	316 aa		28.02	■■■□□ 2.08
SRRM2-231	ENST00000630499	ANKRD13A	Q8IZ07	590 aa		28.02	■■■□□ 2.08
SRRM2-231	ENST00000630499	KLHDC4	Q8TBB5	520 aa		28.02	■■■□□ 2.08
SRRM2-231	ENST00000630499	PTPN18	Q99952	460 aa		28.02	■■■□□ 2.08
SRRM2-231	ENST00000630499		E9PSI1	815 aa		28.01	■■■□□ 2.07
SRRM2-231	ENST00000630499	FGFR2	P21802	821 aa		28.01	■■■□□ 2.07
SRRM2-231	ENST00000630499	RFX5	P48382	616 aa	Predicted RBP	28.01	■■■□□ 2.07
SRRM2-231	ENST00000630499	HDLBP	Q00341	1268 aa	Known RBP	28.01	■■■□□ 2.07
SRRM2-231	ENST00000630499	SLFN5	Q08AF3	891 aa		28.01	■■■□□ 2.07
SRRM2-231	ENST00000630499	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	28.01	■■■□□ 2.07
SRRM2-231	ENST00000630499	MYH13	Q9UKX3	1938 aa		28	■■■□□ 2.07
SRRM2-231	ENST00000630499	KIF16B	Q96L93	1317 aa		28	■■■□□ 2.07
SRRM2-231	ENST00000630499	METTL24	Q5JXM2	366 aa		28	■■■□□ 2.07
SRRM2-231	ENST00000630499	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	28	■■■□□ 2.07
SRRM2-231	ENST00000630499	MS4A4A	Q96JQ5	239 aa		27.99	■■■□□ 2.07
SRRM2-231	ENST00000630499	TMEM39B	Q9GZU3	492 aa		27.99	■■■□□ 2.07
SRRM2-231	ENST00000630499	BCAM	P50895	628 aa		27.97	■■■□□ 2.07
SRRM2-231	ENST00000630499	TRMT2A	Q8IZ69	625 aa	Known RBP	27.97	■■■□□ 2.07
SRRM2-231	ENST00000630499	TBC1D22A	Q8WUA7	517 aa		27.97	■■■□□ 2.07
SRRM2-231	ENST00000630499	MRI	Q9BWK5	157 aa		27.97	■■■□□ 2.07
SRRM2-231	ENST00000630499	RBBP6	Q7Z6E9	1792 aa	Known RBP	27.96	■■■□□ 2.07
SRRM2-231	ENST00000630499	TCP10L2	B9ZVM9	353 aa		27.96	■■■□□ 2.07
SRRM2-231	ENST00000630499	CAP1	Q01518	475 aa		27.96	■■■□□ 2.07
SRRM2-231	ENST00000630499	CRHR2	Q13324	411 aa		27.96	■■■□□ 2.07
SRRM2-231	ENST00000630499	OTOP1	Q7RTM1	612 aa		27.96	■■■□□ 2.07
SRRM2-231	ENST00000630499	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	27.96	■■■□□ 2.07	9e-11	■■■□□ 15.6
SRRM2-231	ENST00000630499	OPTN	Q96CV9	577 aa		27.96	■■■□□ 2.07
SRRM2-231	ENST00000630499	ELP3	Q9H9T3	547 aa		27.96	■■■□□ 2.07
SRRM2-231	ENST00000630499	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	27.96	■■■□□ 2.07
SRRM2-231	ENST00000630499	CHAF1A	Q13111	956 aa	Predicted RBP	27.95	■■■□□ 2.06
SRRM2-231	ENST00000630499	ALDH1L2	Q3SY69	923 aa		27.95	■■■□□ 2.06
SRRM2-231	ENST00000630499	CAVIN4	Q5BKX8	364 aa		27.95	■■■□□ 2.06
SRRM2-231	ENST00000630499	VPS37D	Q86XT2	251 aa		27.95	■■■□□ 2.06
SRRM2-231	ENST00000630499	CNKSR2	Q8WXI2	1034 aa		27.95	■■■□□ 2.06
SRRM2-231	ENST00000630499	ZDHHC15	Q96MV8	337 aa		27.95	■■■□□ 2.06
SRRM2-231	ENST00000630499	VGLL4	Q14135	290 aa		27.94	■■■□□ 2.06
SRRM2-231	ENST00000630499	APOBEC3H	Q6NTF7	200 aa	Known RBP	27.94	■■■□□ 2.06
SRRM2-231	ENST00000630499	CDCA7L	Q96GN5	454 aa		27.94	■■■□□ 2.06
SRRM2-231	ENST00000630499	PUM3	Q15397	648 aa	Known RBP	27.93	■■■□□ 2.06
SRRM2-231	ENST00000630499	ATG9A	Q7Z3C6	839 aa		27.93	■■■□□ 2.06
SRRM2-231	ENST00000630499	TEKT1	Q969V4	418 aa		27.93	■■■□□ 2.06
SRRM2-231	ENST00000630499	SUGT1	Q9Y2Z0	365 aa		27.93	■■■□□ 2.06
SRRM2-231	ENST00000630499	EYA2	O00167	538 aa		27.92	■■■□□ 2.06
SRRM2-231	ENST00000630499	TNNI2	P48788	182 aa		27.92	■■■□□ 2.06
SRRM2-231	ENST00000630499	CACNB3	P54284	484 aa		27.92	■■■□□ 2.06
SRRM2-231	ENST00000630499	FKBP1C	Q5VVH2	108 aa		27.92	■■■□□ 2.06
SRRM2-231	ENST00000630499	BRI3BP	Q8WY22	251 aa		27.92	■■■□□ 2.06
SRRM2-231	ENST00000630499	TRIM17	Q9Y577	477 aa		27.92	■■■□□ 2.06
SRRM2-231	ENST00000630499	MAP3K9	P80192	1104 aa		27.91	■■■□□ 2.06
SRRM2-231	ENST00000630499	FAM83A	Q86UY5	434 aa		27.91	■■■□□ 2.06
SRRM2-231	ENST00000630499	RPAP1	Q9BWH6	1393 aa	Predicted RBP	27.9	■■■□□ 2.06
SRRM2-231	ENST00000630499	OTUD7B	Q6GQQ9	843 aa		27.9	■■■□□ 2.06
SRRM2-231	ENST00000630499	HHIPL2	Q6UWX4	724 aa		27.89	■■■□□ 2.06
SRRM2-231	ENST00000630499	CD99L2	Q8TCZ2	262 aa		27.89	■■■□□ 2.06
SRRM2-231	ENST00000630499	FRAT2	O75474	233 aa	Predicted RBP	27.88	■■■□□ 2.05
SRRM2-231	ENST00000630499	IFIT1	P09914	478 aa	Known RBP	27.88	■■■□□ 2.05
SRRM2-231	ENST00000630499	LPIN2	Q92539	896 aa		27.88	■■■□□ 2.05
SRRM2-231	ENST00000630499	ERO1A	Q96HE7	468 aa		27.88	■■■□□ 2.05
SRRM2-231	ENST00000630499	PTPN22	Q9Y2R2	807 aa		27.88	■■■□□ 2.05
SRRM2-231	ENST00000630499	SNCAIP	Q9Y6H5	919 aa		27.88	■■■□□ 2.05
SRRM2-231	ENST00000630499	SPDYE5	A6NIY4	337 aa		27.87	■■■□□ 2.05
SRRM2-231	ENST00000630499	PRPF38B	Q5VTL8	546 aa	Known RBP	27.87	■■■□□ 2.05
SRRM2-231	ENST00000630499	MAST3	O60307	1309 aa		27.87	■■■□□ 2.05
SRRM2-231	ENST00000630499	SMC4	Q9NTJ3	1288 aa		27.86	■■■□□ 2.05
SRRM2-231	ENST00000630499	KIAA0100	Q14667	2235 aa	Known RBP	27.86	■■■□□ 2.05
SRRM2-231	ENST00000630499	GTF2A2	P52657	109 aa		27.85	■■■□□ 2.05
SRRM2-231	ENST00000630499	SP3	Q02447	781 aa		27.85	■■■□□ 2.05
SRRM2-231	ENST00000630499	FAM43A	Q8N2R8	423 aa		27.85	■■■□□ 2.05
SRRM2-231	ENST00000630499	FBXO3	Q9UK99	471 aa		27.85	■■■□□ 2.05
SRRM2-231	ENST00000630499	ZSWIM8	A7E2V4	1837 aa		27.84	■■■□□ 2.05
SRRM2-231	ENST00000630499	CCL15-CCL14	A0A0B4J2E2	113 aa		27.84	■■■□□ 2.05
SRRM2-231	ENST00000630499	ZBTB22	O15209	634 aa		27.84	■■■□□ 2.05
SRRM2-231	ENST00000630499	CIAO1	O76071	339 aa		27.84	■■■□□ 2.05
SRRM2-231	ENST00000630499	SLC5A1	P13866	664 aa		27.84	■■■□□ 2.05
SRRM2-231	ENST00000630499	CCL15	Q16663	113 aa		27.84	■■■□□ 2.05
SRRM2-231	ENST00000630499	ARMC5	Q96C12	935 aa		27.84	■■■□□ 2.05
SRRM2-231	ENST00000630499	OTUD5	Q96G74	571 aa		27.84	■■■□□ 2.05
SRRM2-231	ENST00000630499	CSAD	Q9Y600	493 aa		27.84	■■■□□ 2.05
SRRM2-231	ENST00000630499	WDR66	Q8TBY9	1149 aa		27.83	■■■□□ 2.05
SRRM2-231	ENST00000630499	POTEF	A5A3E0	1075 aa		27.82	■■■□□ 2.04
SRRM2-231	ENST00000630499	CT47B1	P0C2W7	299 aa	Predicted RBP	27.82	■■■□□ 2.04
SRRM2-231	ENST00000630499	INTS3	Q68E01	1043 aa	Known RBP	27.82	■■■□□ 2.04
SRRM2-231	ENST00000630499	ZKSCAN4	Q969J2	545 aa	Predicted RBP	27.82	■■■□□ 2.04
SRRM2-231	ENST00000630499	EFCC1	Q9HA90	598 aa		27.82	■■■□□ 2.04
SRRM2-231	ENST00000630499	DAGLA	Q9Y4D2	1042 aa		27.82	■■■□□ 2.04
SRRM2-231	ENST00000630499	ERO1B	Q86YB8	467 aa		27.81	■■■□□ 2.04
SRRM2-231	ENST00000630499	WRNIP1	Q96S55	665 aa		27.81	■■■□□ 2.04
SRRM2-231	ENST00000630499	TMOD2	Q9NZR1	351 aa		27.81	■■■□□ 2.04
SRRM2-231	ENST00000630499	UBTFL1	P0CB47	393 aa	Predicted RBP	27.8	■■■□□ 2.04
SRRM2-231	ENST00000630499	PRDX5	P30044	214 aa		27.8	■■■□□ 2.04
SRRM2-231	ENST00000630499	NOB1	Q9ULX3	412 aa	Known RBP	27.8	■■■□□ 2.04
SRRM2-231	ENST00000630499	SALL1	Q9NSC2	1324 aa		27.8	■■■□□ 2.04

Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms