RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 RBM26Q5T8P6 1007 aaKnown RBP13.76□□□□□ -0.21
DDX41-219ENST00000629036 CCDC102BQ68D86 513 aa13.76□□□□□ -0.21
DDX41-219ENST00000629036 XAGE2Q96GT9 111 aa13.76□□□□□ -0.21
DDX41-219ENST00000629036 GPR108Q9NPR9 543 aa13.76□□□□□ -0.21
DDX41-219ENST00000629036 SALL1Q9NSC2 1324 aa13.75□□□□□ -0.21
DDX41-219ENST00000629036 SPDYE2BA6NHP3 402 aa13.75□□□□□ -0.21
DDX41-219ENST00000629036 SPDYE6P0CI01 402 aa13.75□□□□□ -0.21
DDX41-219ENST00000629036 ANGEL2Q5VTE6 544 aaKnown RBP13.75□□□□□ -0.21
DDX41-219ENST00000629036 SURF6O75683 361 aaKnown RBP13.74□□□□□ -0.21
DDX41-219ENST00000629036 ARID4AP29374 1257 aaPredicted RBP13.74□□□□□ -0.21
DDX41-219ENST00000629036 TNNI3KQ59H18 835 aa13.74□□□□□ -0.21
DDX41-219ENST00000629036 CDC37L1Q7L3B6 337 aa13.74□□□□□ -0.21
DDX41-219ENST00000629036 KRT26Q7Z3Y9 468 aa13.74□□□□□ -0.21
DDX41-219ENST00000629036 USP48Q86UV5 1035 aa13.74□□□□□ -0.21
DDX41-219ENST00000629036 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.74□□□□□ -0.21
DDX41-219ENST00000629036 TLR7Q9NYK1 1049 aaKnown RBP13.74□□□□□ -0.21
DDX41-219ENST00000629036 SCAF8Q9UPN6 1271 aaKnown RBP13.74□□□□□ -0.21
DDX41-219ENST00000629036 EXOC6BQ9Y2D4 811 aa13.74□□□□□ -0.21
DDX41-219ENST00000629036 FPGT-TNNI3KV9GXZ4 949 aa13.74□□□□□ -0.21
DDX41-219ENST00000629036 F8W031 263 aaPredicted RBP13.73□□□□□ -0.21
DDX41-219ENST00000629036 SEMA3EO15041 775 aa13.73□□□□□ -0.21
DDX41-219ENST00000629036 MAP2K2P36507 400 aa13.73□□□□□ -0.21
DDX41-219ENST00000629036 CHAF1AQ13111 956 aaPredicted RBP13.73□□□□□ -0.21
DDX41-219ENST00000629036 G3BP1Q13283 466 aaKnown RBP eCLIP13.73□□□□□ -0.21
DDX41-219ENST00000629036 CFAP100Q494V2 611 aa13.73□□□□□ -0.21
DDX41-219ENST00000629036 VPS37DQ86XT2 251 aa13.73□□□□□ -0.21
DDX41-219ENST00000629036 RPAP2Q8IXW5 612 aaPredicted RBP13.73□□□□□ -0.21
DDX41-219ENST00000629036 OGFOD1Q8N543 542 aa13.73□□□□□ -0.21
DDX41-219ENST00000629036 ZNF384Q8TF68 577 aa13.73□□□□□ -0.21
DDX41-219ENST00000629036 TBC1D22AQ8WUA7 517 aa13.73□□□□□ -0.21
DDX41-219ENST00000629036 PRMT6Q96LA8 375 aaPredicted RBP13.73□□□□□ -0.21
DDX41-219ENST00000629036 DBNLQ9UJU6 430 aaKnown RBP13.73□□□□□ -0.21
DDX41-219ENST00000629036 SERPINA10Q9UK55 444 aa13.73□□□□□ -0.21
DDX41-219ENST00000629036 TTF2Q9UNY4 1162 aaKnown RBP13.73□□□□□ -0.21
DDX41-219ENST00000629036 AKAP2Q9Y2D5 859 aa13.73□□□□□ -0.21
DDX41-219ENST00000629036 TLL2Q9Y6L7 1015 aa13.73□□□□□ -0.21
DDX41-219ENST00000629036 SIPA1L1O43166 1804 aa13.73□□□□□ -0.21
DDX41-219ENST00000629036 RFX7Q2KHR2 1363 aa13.72□□□□□ -0.21
DDX41-219ENST00000629036 PRDX5P30044 214 aa13.72□□□□□ -0.21
DDX41-219ENST00000629036 PI16Q6UXB8 463 aa13.72□□□□□ -0.21
DDX41-219ENST00000629036 EAF2Q96CJ1 260 aaPredicted RBP13.72□□□□□ -0.21
DDX41-219ENST00000629036 DBNDD2Q9BQY9 259 aa13.72□□□□□ -0.21
DDX41-219ENST00000629036 SUGT1Q9Y2Z0 365 aa13.72□□□□□ -0.21
DDX41-219ENST00000629036 DDX60LQ5H9U9 1706 aaKnown RBP13.71□□□□□ -0.21
DDX41-219ENST00000629036 CELF2O95319 508 aaKnown RBP13.71□□□□□ -0.21
DDX41-219ENST00000629036 MCAMP43121 646 aa13.71□□□□□ -0.21
DDX41-219ENST00000629036 CRKP46108 304 aa13.71□□□□□ -0.21
DDX41-219ENST00000629036 HDLBPQ00341 1268 aaKnown RBP13.71□□□□□ -0.21
DDX41-219ENST00000629036 SPDYE2Q495Y8 402 aa13.71□□□□□ -0.21
DDX41-219ENST00000629036 WDR66Q8TBY9 1149 aa13.71□□□□□ -0.21
DDX41-219ENST00000629036 CDCA5Q96FF9 252 aa13.71□□□□□ -0.21
DDX41-219ENST00000629036 HMG20BQ9P0W2 317 aa13.71□□□□□ -0.21
DDX41-219ENST00000629036 HDAC9Q9UKV0 1011 aa13.71□□□□□ -0.21
DDX41-219ENST00000629036 PCDHB15Q9Y5E8 787 aa13.71□□□□□ -0.21
DDX41-219ENST00000629036 CA12O43570 354 aa13.7□□□□□ -0.22
DDX41-219ENST00000629036 DLGAP5Q15398 846 aa13.7□□□□□ -0.22
DDX41-219ENST00000629036 APOBEC3HQ6NTF7 200 aaKnown RBP13.7□□□□□ -0.22
DDX41-219ENST00000629036 SAPCD2Q86UD0 394 aa13.7□□□□□ -0.22
DDX41-219ENST00000629036 DCPSQ96C86 337 aaKnown RBP13.7□□□□□ -0.22
DDX41-219ENST00000629036 ZDHHC15Q96MV8 337 aa13.7□□□□□ -0.22
DDX41-219ENST00000629036 CRBNQ96SW2 442 aa13.7□□□□□ -0.22
DDX41-219ENST00000629036 MRIQ9BWK5 157 aa13.7□□□□□ -0.22
DDX41-219ENST00000629036 DENND2AQ9ULE3 1009 aa13.7□□□□□ -0.22
DDX41-219ENST00000629036 GAKO14976 1311 aa13.69□□□□□ -0.22
DDX41-219ENST00000629036 PRPF38BQ5VTL8 546 aaKnown RBP13.69□□□□□ -0.22
DDX41-219ENST00000629036 SULF1Q8IWU6 871 aa13.69□□□□□ -0.22
DDX41-219ENST00000629036 RHPN1Q8TCX5 695 aa13.69□□□□□ -0.22
DDX41-219ENST00000629036 ZNF512BQ96KM6 892 aaPredicted RBP13.69□□□□□ -0.22
DDX41-219ENST00000629036 ZNF408Q9H9D4 720 aa13.69□□□□□ -0.22
DDX41-219ENST00000629036 AK9Q5TCS8 1911 aa13.68□□□□□ -0.22
DDX41-219ENST00000629036 CLRN2A0PK11 232 aa13.68□□□□□ -0.22
DDX41-219ENST00000629036 DIXDC1Q155Q3 683 aa13.68□□□□□ -0.22
DDX41-219ENST00000629036 PRAMEF18Q5VWM3 479 aa13.68□□□□□ -0.22
DDX41-219ENST00000629036 APOBEC3FQ8IUX4 373 aaKnown RBP13.68□□□□□ -0.22
DDX41-219ENST00000629036 CDAN1Q8IWY9 1227 aa13.68□□□□□ -0.22
DDX41-219ENST00000629036 NEUROD6Q96NK8 337 aa13.68□□□□□ -0.22
DDX41-219ENST00000629036 CHMP4BQ9H444 224 aaKnown RBP13.68□□□□□ -0.22
DDX41-219ENST00000629036 GNL3LQ9NVN8 582 aaKnown RBP13.68□□□□□ -0.22
DDX41-219ENST00000629036 ZNF70Q9UC06 446 aaPredicted RBP13.68□□□□□ -0.22
DDX41-219ENST00000629036 DAGLAQ9Y4D2 1042 aa13.68□□□□□ -0.22
DDX41-219ENST00000629036 HMMRO75330 724 aa13.67□□□□□ -0.22
DDX41-219ENST00000629036 FRAT2O75474 233 aaPredicted RBP13.67□□□□□ -0.22
DDX41-219ENST00000629036 OS9Q13438 667 aaPredicted RBP13.67□□□□□ -0.22
DDX41-219ENST00000629036 HHIPL2Q6UWX4 724 aa13.67□□□□□ -0.22
DDX41-219ENST00000629036 ERC1Q8IUD2 1116 aa13.67□□□□□ -0.22
DDX41-219ENST00000629036 SPATA5Q8NB90 893 aa13.67□□□□□ -0.22
DDX41-219ENST00000629036 HHIPL1Q96JK4 782 aa13.67□□□□□ -0.22
DDX41-219ENST00000629036 TEPSINQ96N21 525 aa13.67□□□□□ -0.22
DDX41-219ENST00000629036 ZIC5Q96T25 663 aa13.67□□□□□ -0.22
DDX41-219ENST00000629036 CCDC8Q9H0W5 538 aaPredicted RBP13.67□□□□□ -0.22
DDX41-219ENST00000629036 TDRD3Q9H7E2 651 aaKnown RBP13.67□□□□□ -0.22
DDX41-219ENST00000629036 IL1RAPL2Q9NP60 686 aa13.67□□□□□ -0.22
DDX41-219ENST00000629036 MAST3O60307 1309 aa13.66□□□□□ -0.22
DDX41-219ENST00000629036 TEKT1Q969V4 418 aa13.66□□□□□ -0.22
DDX41-219ENST00000629036 KIF1BPQ96EK5 621 aa13.66□□□□□ -0.22
DDX41-219ENST00000629036 DEFB129Q9H1M3 183 aa13.66□□□□□ -0.22
DDX41-219ENST00000629036 GBA2Q9HCG7 927 aaPredicted RBP13.66□□□□□ -0.22
DDX41-219ENST00000629036 RPAP1Q9BWH6 1393 aaPredicted RBP13.66□□□□□ -0.22
DDX41-219ENST00000629036 PHIPQ8WWQ0 1821 aa13.66□□□□□ -0.22
DDX41-219ENST00000629036 ATAD5Q96QE3 1844 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms