RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 TSPY2A6NKD2 308 aa8.75□□□□□ -1.01
PKP4-217ENST00000628904 ZMYM1Q5SVZ6 1142 aa8.75□□□□□ -1.01
PKP4-217ENST00000628904 LPIN2Q92539 896 aa8.75□□□□□ -1.01
PKP4-217ENST00000628904 ISCA1Q9BUE6 129 aa8.75□□□□□ -1.01
PKP4-217ENST00000628904 TMX4Q9H1E5 349 aaPredicted RBP8.75□□□□□ -1.01
PKP4-217ENST00000628904 CFAP45Q9UL16 551 aa8.75□□□□□ -1.01
PKP4-217ENST00000628904 PDIA3P30101 505 aaKnown RBP8.75□□□□□ -1.01
PKP4-217ENST00000628904 DIXDC1Q155Q3 683 aa8.75□□□□□ -1.01
PKP4-217ENST00000628904 LEO1Q8WVC0 666 aaPredicted RBP8.75□□□□□ -1.01
PKP4-217ENST00000628904 SCAND2PQ9GZW5 306 aaPredicted RBP8.75□□□□□ -1.01
PKP4-217ENST00000628904 COBLO75128 1261 aa8.75□□□□□ -1.01
PKP4-217ENST00000628904 CDK11BP21127 795 aaKnown RBP8.75□□□□□ -1.01
PKP4-217ENST00000628904 DDIT3P35638 169 aa8.75□□□□□ -1.01
PKP4-217ENST00000628904 RABL6Q3YEC7 729 aaPredicted RBP8.75□□□□□ -1.01
PKP4-217ENST00000628904 TPTE2Q6XPS3 522 aa8.75□□□□□ -1.01
PKP4-217ENST00000628904 HELLSQ9NRZ9 838 aa8.75□□□□□ -1.01
PKP4-217ENST00000628904 PALLDQ8WX93 1383 aa8.74□□□□□ -1.01
PKP4-217ENST00000628904 FSD2A1L4K1 749 aa8.74□□□□□ -1.01
PKP4-217ENST00000628904 USP17L12C9JPN9 530 aa8.74□□□□□ -1.01
PKP4-217ENST00000628904 USP17L21D6R901 530 aa8.74□□□□□ -1.01
PKP4-217ENST00000628904 MPHOSPH10O00566 681 aaKnown RBP8.74□□□□□ -1.01
PKP4-217ENST00000628904 WTAPQ15007 396 aa8.74□□□□□ -1.01
PKP4-217ENST00000628904 TRIM22Q8IYM9 498 aa8.74□□□□□ -1.01
PKP4-217ENST00000628904 MAGEB6P1A0A0J9YX57 407 aa8.74□□□□□ -1.01
PKP4-217ENST00000628904 NMT2O60551 498 aa8.74□□□□□ -1.01
PKP4-217ENST00000628904 HMGB1P09429 215 aaKnown RBP8.74□□□□□ -1.01
PKP4-217ENST00000628904 ST3GAL1Q11201 340 aa8.74□□□□□ -1.01
PKP4-217ENST00000628904 IKQ13123 557 aaPredicted RBP8.74□□□□□ -1.01
PKP4-217ENST00000628904 TBC1D10CQ8IV04 446 aa8.74□□□□□ -1.01
PKP4-217ENST00000628904 GPIHBP1Q8IV16 184 aa8.74□□□□□ -1.01
PKP4-217ENST00000628904 EEF2KMTQ96G04 330 aa8.74□□□□□ -1.01
PKP4-217ENST00000628904 ZNF396Q96N95 335 aaPredicted RBP8.74□□□□□ -1.01
PKP4-217ENST00000628904 CLIC6Q96NY7 704 aa8.74□□□□□ -1.01
PKP4-217ENST00000628904 CPVLQ9H3G5 476 aa8.74□□□□□ -1.01
PKP4-217ENST00000628904 MARCH6O60337 910 aa8.74□□□□□ -1.01
PKP4-217ENST00000628904 PRDX5P30044 214 aa8.74□□□□□ -1.01
PKP4-217ENST00000628904 IL6STP40189 918 aaPredicted RBP8.74□□□□□ -1.01
PKP4-217ENST00000628904 TRAPPC3LQ5T215 181 aa8.74□□□□□ -1.01
PKP4-217ENST00000628904 ZSCAN30Q86W11 494 aa8.74□□□□□ -1.01
PKP4-217ENST00000628904 AFMP43652 599 aa8.73□□□□□ -1.01
PKP4-217ENST00000628904 RPS8P62241 208 aaKnown RBP8.73□□□□□ -1.01
PKP4-217ENST00000628904 TYRO3Q06418 890 aa8.73□□□□□ -1.01
PKP4-217ENST00000628904 TTF1Q15361 905 aaPredicted RBP8.73□□□□□ -1.01
PKP4-217ENST00000628904 LRP10Q7Z4F1 713 aa8.73□□□□□ -1.01
PKP4-217ENST00000628904 IFNL3Q8IZI9 196 aa8.73□□□□□ -1.01
PKP4-217ENST00000628904 CLIC4Q9Y696 253 aa8.73□□□□□ -1.01
PKP4-217ENST00000628904 ERCC3P19447 782 aa8.73□□□□□ -1.01
PKP4-217ENST00000628904 CASP7P55210 303 aa8.73□□□□□ -1.01
PKP4-217ENST00000628904 EVX2Q03828 476 aa8.73□□□□□ -1.01
PKP4-217ENST00000628904 MAPKAPK5Q8IW41 473 aa8.73□□□□□ -1.01
PKP4-217ENST00000628904 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.73□□□□□ -1.01
PKP4-217ENST00000628904 UQCRFS1P1P0C7P4 283 aa8.73□□□□□ -1.01
PKP4-217ENST00000628904 LMOD1P29536 600 aaPredicted RBP8.73□□□□□ -1.01
PKP4-217ENST00000628904 OLFM4Q6UX06 510 aa8.73□□□□□ -1.01
PKP4-217ENST00000628904 CYB5R4Q7L1T6 521 aa8.73□□□□□ -1.01
PKP4-217ENST00000628904 MON2Q7Z3U7 1717 aa8.73□□□□□ -1.01
PKP4-217ENST00000628904 NSUN7Q8NE18 718 aaKnown RBP8.73□□□□□ -1.01
PKP4-217ENST00000628904 ZSWIM5Q9P217 1185 aa8.73□□□□□ -1.01
PKP4-217ENST00000628904 RIPOR2Q9Y4F9 1068 aa8.73□□□□□ -1.01
PKP4-217ENST00000628904 CAMTA1Q9Y6Y1 1673 aa8.73□□□□□ -1.01
PKP4-217ENST00000628904 ZFYP08048 801 aaPredicted RBP8.72□□□□□ -1.01
PKP4-217ENST00000628904 GOLGA8HP0CJ92 632 aa8.72□□□□□ -1.01
PKP4-217ENST00000628904 CYP2D6P10635 497 aa8.72□□□□□ -1.01
PKP4-217ENST00000628904 CNBD1Q8NA66 436 aa8.72□□□□□ -1.01
PKP4-217ENST00000628904 LINC00116Q8NCU8 138 aa8.72□□□□□ -1.01
PKP4-217ENST00000628904 C16orf45Q96MC5 204 aaPredicted RBP8.72□□□□□ -1.01
PKP4-217ENST00000628904 VPS54Q9P1Q0 977 aa8.72□□□□□ -1.01
PKP4-217ENST00000628904 V9GY48 417 aaPredicted RBP8.72□□□□□ -1.01
PKP4-217ENST00000628904 KNDC1Q76NI1 1749 aa8.72□□□□□ -1.01
PKP4-217ENST00000628904 HMGN5P82970 282 aaKnown RBP8.72□□□□□ -1.01
PKP4-217ENST00000628904 SSRP1Q08945 709 aaKnown RBP8.72□□□□□ -1.01
PKP4-217ENST00000628904 DOK7Q18PE1 504 aa8.72□□□□□ -1.01
PKP4-217ENST00000628904 CCDC186Q7Z3E2 898 aa8.72□□□□□ -1.01
PKP4-217ENST00000628904 CCAR2Q8N163 923 aaKnown RBP8.72□□□□□ -1.01
PKP4-217ENST00000628904 CABP5Q9NP86 173 aa8.72□□□□□ -1.01
PKP4-217ENST00000628904 ANGEL1Q9UNK9 670 aaKnown RBP8.72□□□□□ -1.01
PKP4-217ENST00000628904 COL15A1P39059 1388 aa8.72□□□□□ -1.01
PKP4-217ENST00000628904 FAM170AA1A519 330 aa8.72□□□□□ -1.01
PKP4-217ENST00000628904 BTBD18B2RXH4 712 aa8.72□□□□□ -1.01
PKP4-217ENST00000628904 UFL1O94874 794 aa8.72□□□□□ -1.01
PKP4-217ENST00000628904 PTGS1P23219 599 aa8.72□□□□□ -1.01
PKP4-217ENST00000628904 TPD52L1Q16890 204 aaPredicted RBP8.72□□□□□ -1.01
PKP4-217ENST00000628904 IFIT1BQ5T764 474 aaKnown RBP8.72□□□□□ -1.01
PKP4-217ENST00000628904 TM6SF1Q9BZW5 370 aa8.72□□□□□ -1.01
PKP4-217ENST00000628904 MRVI1Q9Y6F6 885 aa8.72□□□□□ -1.01
PKP4-217ENST00000628904 HIBADHP31937 336 aaKnown RBP8.71□□□□□ -1.01
PKP4-217ENST00000628904 SCNN1DP51172 638 aa8.71□□□□□ -1.01
PKP4-217ENST00000628904 NR5A1Q13285 461 aa8.71□□□□□ -1.01
PKP4-217ENST00000628904 RTN1Q16799 776 aa8.71□□□□□ -1.01
PKP4-217ENST00000628904 AOPEPQ8N6M6 819 aa8.71□□□□□ -1.01
PKP4-217ENST00000628904 DYNLL2Q96FJ2 89 aa8.71□□□□□ -1.01
PKP4-217ENST00000628904 CCDC39Q9UFE4 941 aa8.71□□□□□ -1.01
PKP4-217ENST00000628904 MAPK8IP1Q9UQF2 711 aa8.71□□□□□ -1.01
PKP4-217ENST00000628904 RPAP1Q9BWH6 1393 aaPredicted RBP8.71□□□□□ -1.02
PKP4-217ENST00000628904 CDC25AP30304 524 aa8.71□□□□□ -1.02
PKP4-217ENST00000628904 ADD2P35612 726 aa8.71□□□□□ -1.02
PKP4-217ENST00000628904 STX17P56962 302 aa8.71□□□□□ -1.02
PKP4-217ENST00000628904 TCP10Q12799 353 aa8.71□□□□□ -1.02
PKP4-217ENST00000628904 LRMPQ12912 555 aa8.71□□□□□ -1.02
PKP4-217ENST00000628904 ZNF827Q17R98 1081 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms