RNA–Protein interactions for RNA: ENST00000628810.1

SOX2-OT-249, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 618 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-249ENST00000628810 CHD4Q14839 1912 aa12.03□□□□□ -0.48
SOX2-OT-249ENST00000628810 MAST2Q6P0Q8 1798 aa12.03□□□□□ -0.48
SOX2-OT-249ENST00000628810 MCAMP43121 646 aa12.03□□□□□ -0.48
SOX2-OT-249ENST00000628810 SCARF1Q14162 830 aa12.03□□□□□ -0.48
SOX2-OT-249ENST00000628810 TTC39AQ5SRH9 613 aa12.03□□□□□ -0.48
SOX2-OT-249ENST00000628810 C9orf131Q5VYM1 1079 aa12.03□□□□□ -0.48
SOX2-OT-249ENST00000628810 PLEKHM2Q8IWE5 1019 aa12.03□□□□□ -0.48
SOX2-OT-249ENST00000628810 RNF181Q9P0P0 153 aa12.03□□□□□ -0.48
SOX2-OT-249ENST00000628810 DENND2AQ9ULE3 1009 aa12.03□□□□□ -0.48
SOX2-OT-249ENST00000628810 SALL1Q9NSC2 1324 aa12.03□□□□□ -0.48
SOX2-OT-249ENST00000628810 ERC2O15083 957 aa12.02□□□□□ -0.49
SOX2-OT-249ENST00000628810 GLRX3O76003 335 aaKnown RBP12.02□□□□□ -0.49
SOX2-OT-249ENST00000628810 FKBP1AP62942 108 aaKnown RBP12.02□□□□□ -0.49
SOX2-OT-249ENST00000628810 STRIP1Q5VSL9 837 aa12.02□□□□□ -0.49
SOX2-OT-249ENST00000628810 SPATA5Q8NB90 893 aa12.02□□□□□ -0.49
SOX2-OT-249ENST00000628810 HMG20BQ9P0W2 317 aa12.02□□□□□ -0.49
SOX2-OT-249ENST00000628810 USP17L3A6NCW0 530 aa12.01□□□□□ -0.49
SOX2-OT-249ENST00000628810 USP17L4A6NCW7 530 aa12.01□□□□□ -0.49
SOX2-OT-249ENST00000628810 G3V3G9 751 aa12.01□□□□□ -0.49
SOX2-OT-249ENST00000628810 DACT2Q5SW24 774 aa12.01□□□□□ -0.49
SOX2-OT-249ENST00000628810 USP17L1Q7RTZ2 530 aa12.01□□□□□ -0.49
SOX2-OT-249ENST00000628810 TBC1D22AQ8WUA7 517 aa12.01□□□□□ -0.49
SOX2-OT-249ENST00000628810 HAUS7Q99871 368 aa12.01□□□□□ -0.49
SOX2-OT-249ENST00000628810 ZNF541Q9H0D2 1346 aa12.01□□□□□ -0.49
SOX2-OT-249ENST00000628810 IGSF3O75054 1194 aa12□□□□□ -0.49
SOX2-OT-249ENST00000628810 VIL1P09327 827 aaKnown RBP12□□□□□ -0.49
SOX2-OT-249ENST00000628810 CXCL9Q07325 125 aa12□□□□□ -0.49
SOX2-OT-249ENST00000628810 TSHZ3Q63HK5 1081 aa12□□□□□ -0.49
SOX2-OT-249ENST00000628810 PI16Q6UXB8 463 aa12□□□□□ -0.49
SOX2-OT-249ENST00000628810 WDR66Q8TBY9 1149 aa12□□□□□ -0.49
SOX2-OT-249ENST00000628810 KCNQ5Q9NR82 932 aa12□□□□□ -0.49
SOX2-OT-249ENST00000628810 IQSEC3Q9UPP2 1182 aaPredicted RBP12□□□□□ -0.49
SOX2-OT-249ENST00000628810 MYO3BQ8WXR4 1341 aa12□□□□□ -0.49
SOX2-OT-249ENST00000628810 PSMD14O00487 310 aa11.99□□□□□ -0.49
SOX2-OT-249ENST00000628810 FRAT2O75474 233 aaPredicted RBP11.99□□□□□ -0.49
SOX2-OT-249ENST00000628810 CYP2E1P05181 493 aaPredicted RBP11.99□□□□□ -0.49
SOX2-OT-249ENST00000628810 ZAP70P43403 619 aa11.99□□□□□ -0.49
SOX2-OT-249ENST00000628810 EIF6P56537 245 aaKnown RBP11.99□□□□□ -0.49
SOX2-OT-249ENST00000628810 GTF2IP78347 998 aa11.99□□□□□ -0.49
SOX2-OT-249ENST00000628810 TNIP1Q15025 636 aa11.99□□□□□ -0.49
SOX2-OT-249ENST00000628810 TTLL5Q6EMB2 1281 aa11.99□□□□□ -0.49
SOX2-OT-249ENST00000628810 CIAPIN1Q6FI81 312 aa11.99□□□□□ -0.49
SOX2-OT-249ENST00000628810 GPC2Q8N158 579 aa11.99□□□□□ -0.49
SOX2-OT-249ENST00000628810 BCL11AQ9H165 835 aa11.99□□□□□ -0.49
SOX2-OT-249ENST00000628810 BOLA2Q9H3K6 86 aa11.99□□□□□ -0.49
SOX2-OT-249ENST00000628810 SUGT1Q9Y2Z0 365 aa11.99□□□□□ -0.49
SOX2-OT-249ENST00000628810 WDR90Q96KV7 1748 aa11.99□□□□□ -0.49
SOX2-OT-249ENST00000628810 RFX7Q2KHR2 1363 aa11.98□□□□□ -0.49
SOX2-OT-249ENST00000628810 RAD17O75943 681 aa11.98□□□□□ -0.49
SOX2-OT-249ENST00000628810 RPS12P25398 132 aaKnown RBP11.98□□□□□ -0.49
SOX2-OT-249ENST00000628810 MFSD14BQ5SR56 506 aa11.98□□□□□ -0.49
SOX2-OT-249ENST00000628810 TTC22Q5TAA0 569 aa11.98□□□□□ -0.49
SOX2-OT-249ENST00000628810 RSBN1LQ6PCB5 846 aaPredicted RBP11.98□□□□□ -0.49
SOX2-OT-249ENST00000628810 TMED8Q6PL24 325 aaPredicted RBP11.98□□□□□ -0.49
SOX2-OT-249ENST00000628810 ZGPATQ8N5A5 531 aaKnown RBP11.98□□□□□ -0.49
SOX2-OT-249ENST00000628810 CERS5Q8N5B7 392 aa11.98□□□□□ -0.49
SOX2-OT-249ENST00000628810 AGBL3Q8NEM8 1001 aa11.98□□□□□ -0.49
SOX2-OT-249ENST00000628810 GMLQ99445 158 aa11.98□□□□□ -0.49
SOX2-OT-249ENST00000628810 PAG1Q9NWQ8 432 aa11.98□□□□□ -0.49
SOX2-OT-249ENST00000628810 GSPT1P15170 499 aaKnown RBP11.97□□□□□ -0.49
SOX2-OT-249ENST00000628810 MMP14P50281 582 aa11.97□□□□□ -0.49
SOX2-OT-249ENST00000628810 CHAF1AQ13111 956 aaPredicted RBP11.97□□□□□ -0.49
SOX2-OT-249ENST00000628810 TTF1Q15361 905 aaPredicted RBP11.97□□□□□ -0.49
SOX2-OT-249ENST00000628810 SKAP1Q86WV1 359 aa11.97□□□□□ -0.49
SOX2-OT-249ENST00000628810 TICAM2Q86XR7 235 aa11.97□□□□□ -0.49
SOX2-OT-249ENST00000628810 L3MBTL3Q96JM7 780 aaPredicted RBP11.97□□□□□ -0.49
SOX2-OT-249ENST00000628810 SNRKQ9NRH2 765 aa11.97□□□□□ -0.49
SOX2-OT-249ENST00000628810 GOLIM4O00461 696 aa11.96□□□□□ -0.49
SOX2-OT-249ENST00000628810 PRDX5P30044 214 aa11.96□□□□□ -0.49
SOX2-OT-249ENST00000628810 KBTBD3Q8NAB2 608 aa11.96□□□□□ -0.49
SOX2-OT-249ENST00000628810 SLAIN1Q8ND83 568 aa11.96□□□□□ -0.49
SOX2-OT-249ENST00000628810 DPF2Q92785 391 aa11.96□□□□□ -0.49
SOX2-OT-249ENST00000628810 DNAJC2Q99543 621 aaKnown RBP11.96□□□□□ -0.49
SOX2-OT-249ENST00000628810 ANTXR1Q9H6X2 564 aa11.96□□□□□ -0.49
SOX2-OT-249ENST00000628810 PIH1D3Q9NQM4 214 aaKnown RBP11.96□□□□□ -0.49
SOX2-OT-249ENST00000628810 JAG2Q9Y219 1238 aa11.96□□□□□ -0.49
SOX2-OT-249ENST00000628810 NDUFB9Q9Y6M9 179 aa11.96□□□□□ -0.49
SOX2-OT-249ENST00000628810 MYH7P12883 1935 aa11.96□□□□□ -0.5
SOX2-OT-249ENST00000628810 MAST3O60307 1309 aa11.95□□□□□ -0.5
SOX2-OT-249ENST00000628810 GLTPD2A6NH11 291 aa11.95□□□□□ -0.5
SOX2-OT-249ENST00000628810 GRIK5Q16478 980 aa11.95□□□□□ -0.5
SOX2-OT-249ENST00000628810 BMP2KLQ5H9B9 411 aa11.95□□□□□ -0.5
SOX2-OT-249ENST00000628810 SPTY2D1Q68D10 685 aaPredicted RBP11.95□□□□□ -0.5
SOX2-OT-249ENST00000628810 FBXW7Q969H0 707 aa11.95□□□□□ -0.5
SOX2-OT-249ENST00000628810 EVI5LQ96CN4 794 aa11.95□□□□□ -0.5
SOX2-OT-249ENST00000628810 EDC3Q96F86 508 aaKnown RBP11.95□□□□□ -0.5
SOX2-OT-249ENST00000628810 MXD3Q9BW11 206 aa11.95□□□□□ -0.5
SOX2-OT-249ENST00000628810 MYO5AQ9Y4I1 1855 aaKnown RBP11.95□□□□□ -0.5
SOX2-OT-249ENST00000628810 ADAMTSL1Q8N6G6 1762 aa11.95□□□□□ -0.5
SOX2-OT-249ENST00000628810 LDHBP07195 334 aaKnown RBP11.94□□□□□ -0.5
SOX2-OT-249ENST00000628810 RGS3P49796 1198 aa11.94□□□□□ -0.5
SOX2-OT-249ENST00000628810 GMPSP49915 693 aaPredicted RBP11.94□□□□□ -0.5
SOX2-OT-249ENST00000628810 SCNN1DP51172 638 aa11.94□□□□□ -0.5
SOX2-OT-249ENST00000628810 ZNF280AP59817 542 aaPredicted RBP11.94□□□□□ -0.5
SOX2-OT-249ENST00000628810 HDLBPQ00341 1268 aaKnown RBP11.94□□□□□ -0.5
SOX2-OT-249ENST00000628810 DPY19L2Q6NUT2 758 aa11.94□□□□□ -0.5
SOX2-OT-249ENST00000628810 TBC1D9Q6ZT07 1266 aa11.94□□□□□ -0.5
SOX2-OT-249ENST00000628810 ERICH6Q7L0X2 663 aa11.94□□□□□ -0.5
SOX2-OT-249ENST00000628810 CNTROBQ8N137 903 aa11.94□□□□□ -0.5
SOX2-OT-249ENST00000628810 PDCD7Q8N8D1 485 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms