RNA–Protein interactions for RNA: ENST00000628566.2

NR1I3-235, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 5 BASIC

Gene NR1I3, Length 1,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-235ENST00000628566 ERICH6Q7L0X2 663 aa9.54□□□□□ -0.88
NR1I3-235ENST00000628566 SIRT2Q8IXJ6 389 aa9.54□□□□□ -0.88
NR1I3-235ENST00000628566 CERS5Q8N5B7 392 aa9.54□□□□□ -0.88
NR1I3-235ENST00000628566 SPATA5Q8NB90 893 aa9.54□□□□□ -0.88
NR1I3-235ENST00000628566 ZNF512BQ96KM6 892 aaPredicted RBP9.54□□□□□ -0.88
NR1I3-235ENST00000628566 DBNDD2Q9BQY9 259 aa9.54□□□□□ -0.88
NR1I3-235ENST00000628566 NOL10Q9BSC4 688 aaKnown RBP9.54□□□□□ -0.88
NR1I3-235ENST00000628566 CCDC8Q9H0W5 538 aaPredicted RBP9.54□□□□□ -0.88
NR1I3-235ENST00000628566 RWDD1Q9H446 243 aaPredicted RBP9.54□□□□□ -0.88
NR1I3-235ENST00000628566 DCTPP1Q9H773 170 aa9.54□□□□□ -0.88
NR1I3-235ENST00000628566 IL1RAPL2Q9NP60 686 aa9.54□□□□□ -0.88
NR1I3-235ENST00000628566 ADAMTSL1Q8N6G6 1762 aa9.54□□□□□ -0.88
NR1I3-235ENST00000628566 SHTN1A0MZ66 631 aa9.53□□□□□ -0.88
NR1I3-235ENST00000628566 SPDYE2BA6NHP3 402 aa9.53□□□□□ -0.88
NR1I3-235ENST00000628566 LDHCP07864 332 aa9.53□□□□□ -0.88
NR1I3-235ENST00000628566 SPDYE6P0CI01 402 aa9.53□□□□□ -0.88
NR1I3-235ENST00000628566 CRKP46108 304 aa9.53□□□□□ -0.88
NR1I3-235ENST00000628566 TTF1Q15361 905 aaPredicted RBP9.53□□□□□ -0.88
NR1I3-235ENST00000628566 TMED8Q6PL24 325 aaPredicted RBP9.53□□□□□ -0.88
NR1I3-235ENST00000628566 HHIPL2Q6UWX4 724 aa9.53□□□□□ -0.88
NR1I3-235ENST00000628566 EAF2Q96CJ1 260 aaPredicted RBP9.53□□□□□ -0.88
NR1I3-235ENST00000628566 GCC1Q96CN9 775 aa9.53□□□□□ -0.88
NR1I3-235ENST00000628566 BCL11AQ9H165 835 aa9.53□□□□□ -0.88
NR1I3-235ENST00000628566 CREBZFQ9NS37 354 aa9.53□□□□□ -0.88
NR1I3-235ENST00000628566 LRP2BPQ9P2M1 347 aa9.53□□□□□ -0.88
NR1I3-235ENST00000628566 PPP2R3BQ9Y5P8 575 aa9.53□□□□□ -0.88
NR1I3-235ENST00000628566 COL1A1P02452 1464 aaPredicted RBP9.53□□□□□ -0.88
NR1I3-235ENST00000628566 ITGBL1O95965 494 aaPredicted RBP9.52□□□□□ -0.89
NR1I3-235ENST00000628566 HDAC1Q13547 482 aaPredicted RBP9.52□□□□□ -0.89
NR1I3-235ENST00000628566 NBPF9Q3BBW0 867 aa9.52□□□□□ -0.89
NR1I3-235ENST00000628566 USP48Q86UV5 1035 aa9.52□□□□□ -0.89
NR1I3-235ENST00000628566 C2orf69Q8N8R5 385 aa9.52□□□□□ -0.89
NR1I3-235ENST00000628566 HOOK2Q96ED9 719 aa9.52□□□□□ -0.89
NR1I3-235ENST00000628566 ZDHHC15Q96MV8 337 aa9.52□□□□□ -0.89
NR1I3-235ENST00000628566 GLIS2Q9BZE0 524 aaPredicted RBP9.52□□□□□ -0.89
NR1I3-235ENST00000628566 ZNF408Q9H9D4 720 aa9.52□□□□□ -0.89
NR1I3-235ENST00000628566 VEZTQ9HBM0 779 aa9.52□□□□□ -0.89
NR1I3-235ENST00000628566 RAI14Q9P0K7 980 aa9.52□□□□□ -0.89
NR1I3-235ENST00000628566 HMG20BQ9P0W2 317 aa9.52□□□□□ -0.89
NR1I3-235ENST00000628566 DBNLQ9UJU6 430 aaKnown RBP9.52□□□□□ -0.89
NR1I3-235ENST00000628566 ABT1Q9ULW3 272 aaKnown RBP9.52□□□□□ -0.89
NR1I3-235ENST00000628566 PCDHB15Q9Y5E8 787 aa9.52□□□□□ -0.89
NR1I3-235ENST00000628566 PASKQ96RG2 1323 aa9.52□□□□□ -0.89
NR1I3-235ENST00000628566 ZNF646O15015 1829 aaPredicted RBP9.52□□□□□ -0.89
NR1I3-235ENST00000628566 CELF2O95319 508 aaKnown RBP9.51□□□□□ -0.89
NR1I3-235ENST00000628566 EGFRP00533 1210 aa9.51□□□□□ -0.89
NR1I3-235ENST00000628566 NEFLP07196 543 aa9.51□□□□□ -0.89
NR1I3-235ENST00000628566 PRDX5P30044 214 aa9.51□□□□□ -0.89
NR1I3-235ENST00000628566 CERS3Q8IU89 383 aa9.51□□□□□ -0.89
NR1I3-235ENST00000628566 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.51□□□□□ -0.89
NR1I3-235ENST00000628566 RNF39Q9H2S5 420 aa9.51□□□□□ -0.89
NR1I3-235ENST00000628566 ERC2O15083 957 aa9.5□□□□□ -0.89
NR1I3-235ENST00000628566 BAG3O95817 575 aa9.5□□□□□ -0.89
NR1I3-235ENST00000628566 MAP4K4O95819 1239 aaPredicted RBP9.5□□□□□ -0.89
NR1I3-235ENST00000628566 MCAMP43121 646 aa9.5□□□□□ -0.89
NR1I3-235ENST00000628566 FKBP1BP68106 108 aa9.5□□□□□ -0.89
NR1I3-235ENST00000628566 MAP3K12Q12852 859 aa9.5□□□□□ -0.89
NR1I3-235ENST00000628566 LRRFIP1Q32MZ4 808 aaKnown RBP9.5□□□□□ -0.89
NR1I3-235ENST00000628566 SUPT20HL1Q3ZLR7 823 aa9.5□□□□□ -0.89
NR1I3-235ENST00000628566 EXOC6Q8TAG9 804 aa9.5□□□□□ -0.89
NR1I3-235ENST00000628566 ZBED3Q96IU2 234 aaPredicted RBP9.5□□□□□ -0.89
NR1I3-235ENST00000628566 PRMT6Q96LA8 375 aaPredicted RBP9.5□□□□□ -0.89
NR1I3-235ENST00000628566 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.5□□□□□ -0.89
NR1I3-235ENST00000628566 CLRN2A0PK11 232 aa9.49□□□□□ -0.89
NR1I3-235ENST00000628566 ADM5C9JUS6 153 aa9.49□□□□□ -0.89
NR1I3-235ENST00000628566 TRAF5O00463 557 aa9.49□□□□□ -0.89
NR1I3-235ENST00000628566 PPP1R12BO60237 982 aaPredicted RBP9.49□□□□□ -0.89
NR1I3-235ENST00000628566 PLCG2P16885 1265 aa9.49□□□□□ -0.89
NR1I3-235ENST00000628566 ECE1P42892 770 aa9.49□□□□□ -0.89
NR1I3-235ENST00000628566 ZAP70P43403 619 aa9.49□□□□□ -0.89
NR1I3-235ENST00000628566 TTLL12Q14166 644 aaPredicted RBP9.49□□□□□ -0.89
NR1I3-235ENST00000628566 SPDYE2Q495Y8 402 aa9.49□□□□□ -0.89
NR1I3-235ENST00000628566 ANKRD45Q5TZF3 282 aa9.49□□□□□ -0.89
NR1I3-235ENST00000628566 FKBP1CQ5VVH2 108 aa9.49□□□□□ -0.89
NR1I3-235ENST00000628566 NAA16Q6N069 864 aaPredicted RBP9.49□□□□□ -0.89
NR1I3-235ENST00000628566 CDCA5Q96FF9 252 aa9.49□□□□□ -0.89
NR1I3-235ENST00000628566 FAM163AQ96GL9 167 aaPredicted RBP9.49□□□□□ -0.89
NR1I3-235ENST00000628566 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.49□□□□□ -0.89
NR1I3-235ENST00000628566 DEFB129Q9H1M3 183 aa9.49□□□□□ -0.89
NR1I3-235ENST00000628566 TDRD3Q9H7E2 651 aaKnown RBP9.49□□□□□ -0.89
NR1I3-235ENST00000628566 GBA2Q9HCG7 927 aaPredicted RBP9.49□□□□□ -0.89
NR1I3-235ENST00000628566 SNRKQ9NRH2 765 aa9.49□□□□□ -0.89
NR1I3-235ENST00000628566 ECHDC1Q9NTX5 307 aa9.49□□□□□ -0.89
NR1I3-235ENST00000628566 TLR7Q9NYK1 1049 aaKnown RBP9.49□□□□□ -0.89
NR1I3-235ENST00000628566 ZNF70Q9UC06 446 aaPredicted RBP9.49□□□□□ -0.89
NR1I3-235ENST00000628566 ECM29Q5VYK3 1845 aa9.49□□□□□ -0.89
NR1I3-235ENST00000628566 IDH1O75874 414 aaKnown RBP9.48□□□□□ -0.89
NR1I3-235ENST00000628566 ATP5JP18859 108 aa9.48□□□□□ -0.89
NR1I3-235ENST00000628566 MECOMQ03112 1051 aa9.48□□□□□ -0.89
NR1I3-235ENST00000628566 DEFB115Q30KQ5 88 aa9.48□□□□□ -0.89
NR1I3-235ENST00000628566 ZSCAN25Q6NSZ9 544 aa9.48□□□□□ -0.89
NR1I3-235ENST00000628566 PAXIP1Q6ZW49 1069 aaPredicted RBP9.48□□□□□ -0.89
NR1I3-235ENST00000628566 ARMC9Q7Z3E5 817 aa9.48□□□□□ -0.89
NR1I3-235ENST00000628566 FAM83AQ86UY5 434 aa9.48□□□□□ -0.89
NR1I3-235ENST00000628566 DNAJC2Q99543 621 aaKnown RBP9.48□□□□□ -0.89
NR1I3-235ENST00000628566 DAGLAQ9Y4D2 1042 aa9.48□□□□□ -0.89
NR1I3-235ENST00000628566 TRPM7Q96QT4 1865 aa9.48□□□□□ -0.89
NR1I3-235ENST00000628566 MROH7-TTC4A0A0A0MT08 1334 aa9.48□□□□□ -0.89
NR1I3-235ENST00000628566 ASTN2O75129 1339 aaPredicted RBP9.48□□□□□ -0.89
NR1I3-235ENST00000628566 TTC41PQ6P2S7 1318 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms