RNA–Protein interactions for RNA: ENST00000627185.1

CHD2-209, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 3

Gene CHD2, Length 533 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-209ENST00000627185 IL2RBP14784 551 aa10.07□□□□□ -0.8
CHD2-209ENST00000627185 ME3Q16798 604 aa10.07□□□□□ -0.8
CHD2-209ENST00000627185 ADCK5Q3MIX3 580 aa10.07□□□□□ -0.8
CHD2-209ENST00000627185 MCMDC2Q4G0Z9 681 aa10.07□□□□□ -0.8
CHD2-209ENST00000627185 NBPF14Q5TI25 921 aa10.07□□□□□ -0.8
CHD2-209ENST00000627185 NBPF10Q6P3W6 841 aaKnown RBP10.07□□□□□ -0.8
CHD2-209ENST00000627185 ATG9AQ7Z3C6 839 aa10.07□□□□□ -0.8
CHD2-209ENST00000627185 NBPF15Q8N660 670 aa10.07□□□□□ -0.8
CHD2-209ENST00000627185 FSD1Q9BTV5 496 aa10.07□□□□□ -0.8
CHD2-209ENST00000627185 SCAND2PQ9GZW5 306 aaPredicted RBP10.07□□□□□ -0.8
CHD2-209ENST00000627185 NUP188Q5SRE5 1749 aa10.07□□□□□ -0.8
CHD2-209ENST00000627185 ZBTB7CA1YPR0 619 aa10.06□□□□□ -0.8
CHD2-209ENST00000627185 CSF1RP07333 972 aa10.06□□□□□ -0.8
CHD2-209ENST00000627185 ZFYP08048 801 aaPredicted RBP10.06□□□□□ -0.8
CHD2-209ENST00000627185 GJB2P29033 226 aa10.06□□□□□ -0.8
CHD2-209ENST00000627185 ST3GAL1Q11201 340 aa10.06□□□□□ -0.8
CHD2-209ENST00000627185 AIMP1Q12904 312 aaKnown RBP10.06□□□□□ -0.8
CHD2-209ENST00000627185 RBM43Q6ZSC3 357 aaKnown RBP10.06□□□□□ -0.8
CHD2-209ENST00000627185 SMARCC2Q8TAQ2 1214 aa10.06□□□□□ -0.8
CHD2-209ENST00000627185 FAM227BQ96M60 508 aa10.06□□□□□ -0.8
CHD2-209ENST00000627185 FUCA2Q9BTY2 467 aa10.06□□□□□ -0.8
CHD2-209ENST00000627185 CCDC8Q9H0W5 538 aaPredicted RBP10.06□□□□□ -0.8
CHD2-209ENST00000627185 PCDH10Q9P2E7 1040 aa10.06□□□□□ -0.8
CHD2-209ENST00000627185 CCDC39Q9UFE4 941 aa10.06□□□□□ -0.8
CHD2-209ENST00000627185 TPCN1Q9ULQ1 816 aa10.06□□□□□ -0.8
CHD2-209ENST00000627185 WDR19Q8NEZ3 1342 aa10.06□□□□□ -0.8
CHD2-209ENST00000627185 CDHR2Q9BYE9 1310 aa10.06□□□□□ -0.8
CHD2-209ENST00000627185 CFAP99D6REC4 459 aa10.05□□□□□ -0.8
CHD2-209ENST00000627185 EYA2O00167 538 aa10.05□□□□□ -0.8
CHD2-209ENST00000627185 NR1I2O75469 434 aa10.05□□□□□ -0.8
CHD2-209ENST00000627185 OFD1O75665 1012 aa10.05□□□□□ -0.8
CHD2-209ENST00000627185 AP1G2O75843 785 aa10.05□□□□□ -0.8
CHD2-209ENST00000627185 MAP4K4O95819 1239 aaPredicted RBP10.05□□□□□ -0.8
CHD2-209ENST00000627185 PCCAP05165 728 aaPredicted RBP10.05□□□□□ -0.8
CHD2-209ENST00000627185 TFCP2Q12800 502 aa10.05□□□□□ -0.8
CHD2-209ENST00000627185 TCIRG1Q13488 830 aa10.05□□□□□ -0.8
CHD2-209ENST00000627185 TOB2Q14106 344 aaPredicted RBP10.05□□□□□ -0.8
CHD2-209ENST00000627185 ZMYM1Q5SVZ6 1142 aa10.05□□□□□ -0.8
CHD2-209ENST00000627185 UBE3BQ7Z3V4 1068 aa10.05□□□□□ -0.8
CHD2-209ENST00000627185 RETREG3Q86VR2 466 aa10.05□□□□□ -0.8
CHD2-209ENST00000627185 SYMPKQ92797 1274 aaKnown RBP10.05□□□□□ -0.8
CHD2-209ENST00000627185 NEK1Q96PY6 1258 aa10.05□□□□□ -0.8
CHD2-209ENST00000627185 BOLA2Q9H3K6 86 aa10.05□□□□□ -0.8
CHD2-209ENST00000627185 ZSCAN16Q9H4T2 348 aaPredicted RBP10.05□□□□□ -0.8
CHD2-209ENST00000627185 TLR7Q9NYK1 1049 aaKnown RBP10.05□□□□□ -0.8
CHD2-209ENST00000627185 NSFL1CQ9UNZ2 370 aaKnown RBP10.05□□□□□ -0.8
CHD2-209ENST00000627185 AKAP2Q9Y2D5 859 aa10.05□□□□□ -0.8
CHD2-209ENST00000627185 ZKSCAN5Q9Y2L8 839 aa10.05□□□□□ -0.8
CHD2-209ENST00000627185 KIF3AQ9Y496 699 aa10.05□□□□□ -0.8
CHD2-209ENST00000627185 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.05□□□□□ -0.8
CHD2-209ENST00000627185 ZNF609O15014 1411 aa10.05□□□□□ -0.8
CHD2-209ENST00000627185 XIRP1Q702N8 1843 aaKnown RBP10.05□□□□□ -0.8
CHD2-209ENST00000627185 SYCE3A1L190 88 aa10.04□□□□□ -0.8
CHD2-209ENST00000627185 MYL6BP14649 208 aa10.04□□□□□ -0.8
CHD2-209ENST00000627185 KRT85P78386 507 aa10.04□□□□□ -0.8
CHD2-209ENST00000627185 HMGN5P82970 282 aaKnown RBP10.04□□□□□ -0.8
CHD2-209ENST00000627185 HSP90AB3PQ58FF7 597 aa10.04□□□□□ -0.8
CHD2-209ENST00000627185 NAA16Q6N069 864 aaPredicted RBP10.04□□□□□ -0.8
CHD2-209ENST00000627185 BLOC1S3Q6QNY0 202 aa10.04□□□□□ -0.8
CHD2-209ENST00000627185 LMBR1LQ6UX01 489 aa10.04□□□□□ -0.8
CHD2-209ENST00000627185 SCUBE3Q8IX30 993 aa10.04□□□□□ -0.8
CHD2-209ENST00000627185 GTF3C6Q969F1 213 aa10.04□□□□□ -0.8
CHD2-209ENST00000627185 THAP11Q96EK4 314 aa10.04□□□□□ -0.8
CHD2-209ENST00000627185 PRDM11Q9NQV5 511 aa10.04□□□□□ -0.8
CHD2-209ENST00000627185 PLSCR2Q9NRY7 297 aa10.04□□□□□ -0.8
CHD2-209ENST00000627185 SLAIN2Q9P270 581 aa10.04□□□□□ -0.8
CHD2-209ENST00000627185 USP25Q9UHP3 1055 aa10.04□□□□□ -0.8
CHD2-209ENST00000627185 DISP2A7MBM2 1401 aa10.04□□□□□ -0.8
CHD2-209ENST00000627185 NHSL1Q5SYE7 1610 aa10.04□□□□□ -0.8
CHD2-209ENST00000627185 PFKFB2O60825 505 aa10.03□□□□□ -0.8
CHD2-209ENST00000627185 LARGE1O95461 756 aa10.03□□□□□ -0.8
CHD2-209ENST00000627185 TPM3P06753 285 aa10.03□□□□□ -0.8
CHD2-209ENST00000627185 TPM2P07951 284 aa10.03□□□□□ -0.8
CHD2-209ENST00000627185 USP17L8P0C7I0 530 aa10.03□□□□□ -0.8
CHD2-209ENST00000627185 KCNJ4P48050 445 aa10.03□□□□□ -0.8
CHD2-209ENST00000627185 EXOSC10Q01780 885 aaKnown RBP10.03□□□□□ -0.8
CHD2-209ENST00000627185 TJP1Q07157 1748 aa10.03□□□□□ -0.8
CHD2-209ENST00000627185 LARP1BQ659C4 914 aaKnown RBP10.03□□□□□ -0.8
CHD2-209ENST00000627185 BRICD5Q6PL45 260 aa10.03□□□□□ -0.8
CHD2-209ENST00000627185 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.03□□□□□ -0.8
CHD2-209ENST00000627185 RNF19BQ6ZMZ0 732 aa10.03□□□□□ -0.8
CHD2-209ENST00000627185 DHX32Q7L7V1 743 aaKnown RBP10.03□□□□□ -0.8
CHD2-209ENST00000627185 ZNF589Q86UQ0 364 aaPredicted RBP10.03□□□□□ -0.8
CHD2-209ENST00000627185 MTMR14Q8NCE2 650 aa10.03□□□□□ -0.8
CHD2-209ENST00000627185 HELBQ8NG08 1087 aaPredicted RBP10.03□□□□□ -0.8
CHD2-209ENST00000627185 ZNF274Q96GC6 653 aaPredicted RBP10.03□□□□□ -0.8
CHD2-209ENST00000627185 DDX19AQ9NUU7 478 aaKnown RBP10.03□□□□□ -0.8
CHD2-209ENST00000627185 ABCA3Q99758 1704 aa10.02□□□□□ -0.8
CHD2-209ENST00000627185 SHANK3Q9BYB0 1731 aa10.02□□□□□ -0.8
CHD2-209ENST00000627185 A6NJR5 290 aa10.02□□□□□ -0.81
CHD2-209ENST00000627185 ERVV-1B6SEH8 477 aa10.02□□□□□ -0.81
CHD2-209ENST00000627185 MSNP26038 577 aaKnown RBP10.02□□□□□ -0.81
CHD2-209ENST00000627185 CCDC83Q8IWF9 413 aa10.02□□□□□ -0.81
CHD2-209ENST00000627185 PRR7Q8TB68 274 aa10.02□□□□□ -0.81
CHD2-209ENST00000627185 DBNDD2Q9BQY9 259 aa10.02□□□□□ -0.81
CHD2-209ENST00000627185 PAG1Q9NWQ8 432 aa10.02□□□□□ -0.81
CHD2-209ENST00000627185 CTNNA3Q9UI47 895 aa10.02□□□□□ -0.81
CHD2-209ENST00000627185 ATRNO75882 1429 aa10.01□□□□□ -0.81
CHD2-209ENST00000627185 GADD45BO75293 160 aaPredicted RBP10.01□□□□□ -0.81
CHD2-209ENST00000627185 FMNL1O95466 1100 aaPredicted RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms