RNA–Protein interactions for RNA: ENST00000625810.2

ATG4B-226, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4 BASIC

Gene ATG4B, Length 370 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-226ENST00000625810 ZNF70Q9UC06 446 aaPredicted RBP23.99■■□□□ 1.43
ATG4B-226ENST00000625810 CRKP46108 304 aa23.98■■□□□ 1.43
ATG4B-226ENST00000625810 RFX5P48382 616 aaPredicted RBP23.98■■□□□ 1.43
ATG4B-226ENST00000625810 GRIK5Q16478 980 aa23.98■■□□□ 1.43
ATG4B-226ENST00000625810 DZIP1LQ8IYY4 767 aaKnown RBP23.98■■□□□ 1.43
ATG4B-226ENST00000625810 WNK4Q96J92 1243 aa23.98■■□□□ 1.43
ATG4B-226ENST00000625810 R3HDMLQ9H3Y0 253 aa23.98■■□□□ 1.43
ATG4B-226ENST00000625810 HDAC5Q9UQL6 1122 aa23.98■■□□□ 1.43
ATG4B-226ENST00000625810 LAMB1P07942 1786 aa23.98■■□□□ 1.43
ATG4B-226ENST00000625810 MANSC4A6NHS7 340 aaPredicted RBP23.97■■□□□ 1.43
ATG4B-226ENST00000625810 UNCXA6NJT0 531 aa23.97■■□□□ 1.43
ATG4B-226ENST00000625810 ZBTB48P10074 688 aaPredicted RBP23.97■■□□□ 1.43
ATG4B-226ENST00000625810 IREB2P48200 963 aaKnown RBP23.97■■□□□ 1.43
ATG4B-226ENST00000625810 SOX10P56693 466 aa23.97■■□□□ 1.43
ATG4B-226ENST00000625810 USP2O75604 605 aaPredicted RBP23.96■■□□□ 1.43
ATG4B-226ENST00000625810 SLC5A1P13866 664 aa23.96■■□□□ 1.43
ATG4B-226ENST00000625810 HPS5Q9UPZ3 1129 aa23.96■■□□□ 1.43
ATG4B-226ENST00000625810 FGFR2P21802 821 aa23.95■■□□□ 1.42
ATG4B-226ENST00000625810 PKN2Q16513 984 aaKnown RBP23.95■■□□□ 1.42
ATG4B-226ENST00000625810 CDAN1Q8IWY9 1227 aa23.95■■□□□ 1.42
ATG4B-226ENST00000625810 SIL1Q9H173 461 aa23.95■■□□□ 1.42
ATG4B-226ENST00000625810 TNRC18O15417 2968 aaPredicted RBP23.94■■□□□ 1.42
ATG4B-226ENST00000625810 OTOFQ9HC10 1997 aa23.94■■□□□ 1.42
ATG4B-226ENST00000625810 KIF16BQ96L93 1317 aa23.94■■□□□ 1.42
ATG4B-226ENST00000625810 TCP10L2B9ZVM9 353 aa23.94■■□□□ 1.42
ATG4B-226ENST00000625810 ALDH1A1P00352 501 aa23.94■■□□□ 1.42
ATG4B-226ENST00000625810 GJA5P36382 358 aa23.94■■□□□ 1.42
ATG4B-226ENST00000625810 TNNI2P48788 182 aa23.94■■□□□ 1.42
ATG4B-226ENST00000625810 RARSP54136 660 aaKnown RBP23.94■■□□□ 1.42
ATG4B-226ENST00000625810 INHBEP58166 350 aa23.94■■□□□ 1.42
ATG4B-226ENST00000625810 HDLBPQ00341 1268 aaKnown RBP23.94■■□□□ 1.42
ATG4B-226ENST00000625810 IFNL1Q8IU54 200 aa23.94■■□□□ 1.42
ATG4B-226ENST00000625810 LPIN2Q92539 896 aa23.94■■□□□ 1.42
ATG4B-226ENST00000625810 TEKT1Q969V4 418 aa23.94■■□□□ 1.42
ATG4B-226ENST00000625810 TEPSINQ96N21 525 aa23.94■■□□□ 1.42
ATG4B-226ENST00000625810 IGF2BP3O00425 579 aaKnown RBP eCLIP23.93■■□□□ 1.42
ATG4B-226ENST00000625810 FKTNO75072 461 aa23.93■■□□□ 1.42
ATG4B-226ENST00000625810 FBXO3Q9UK99 471 aa23.93■■□□□ 1.42
ATG4B-226ENST00000625810 LRRFIP2Q9Y608 721 aaKnown RBP23.93■■□□□ 1.42
ATG4B-226ENST00000625810 ATG9AQ7Z3C6 839 aa23.92■■□□□ 1.42
ATG4B-226ENST00000625810 ANKRD13AQ8IZ07 590 aa23.92■■□□□ 1.42
ATG4B-226ENST00000625810 CEP126Q9P2H0 1117 aa23.92■■□□□ 1.42
ATG4B-226ENST00000625810 MAST3O60307 1309 aa23.91■■□□□ 1.42
ATG4B-226ENST00000625810 TMEM39BQ9GZU3 492 aa23.91■■□□□ 1.42
ATG4B-226ENST00000625810 SUGT1Q9Y2Z0 365 aa23.91■■□□□ 1.42
ATG4B-226ENST00000625810 CIAO1O76071 339 aa23.9■■□□□ 1.42
ATG4B-226ENST00000625810 WDR66Q8TBY9 1149 aa23.9■■□□□ 1.42
ATG4B-226ENST00000625810 ARHGAP45Q92619 1136 aa23.9■■□□□ 1.42
ATG4B-226ENST00000625810 MRIQ9BWK5 157 aa23.9■■□□□ 1.42
ATG4B-226ENST00000625810 TMOD2Q9NZR1 351 aa23.9■■□□□ 1.42
ATG4B-226ENST00000625810 ATP2B3Q16720 1220 aa23.89■■□□□ 1.41
ATG4B-226ENST00000625810 FBXO46Q6PJ61 603 aaPredicted RBP23.89■■□□□ 1.41
ATG4B-226ENST00000625810 MEIS3Q99687 375 aa23.89■■□□□ 1.41
ATG4B-226ENST00000625810 ELP3Q9H9T3 547 aa23.89■■□□□ 1.41
ATG4B-226ENST00000625810 MYH13Q9UKX3 1938 aa23.88■■□□□ 1.41
ATG4B-226ENST00000625810 ZDHHC15Q96MV8 337 aa23.88■■□□□ 1.41
ATG4B-226ENST00000625810 GNL3LQ9NVN8 582 aaKnown RBP23.88■■□□□ 1.41
ATG4B-226ENST00000625810 IPO8O15397 1037 aaKnown RBP23.87■■□□□ 1.41
ATG4B-226ENST00000625810 GNAI3P08754 354 aa23.87■■□□□ 1.41
ATG4B-226ENST00000625810 IL15P40933 162 aaPredicted RBP23.87■■□□□ 1.41
ATG4B-226ENST00000625810 CACNB3P54284 484 aa23.87■■□□□ 1.41
ATG4B-226ENST00000625810 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.87■■□□□ 1.41
ATG4B-226ENST00000625810 OPTNQ96CV9 577 aa23.87■■□□□ 1.41
ATG4B-226ENST00000625810 PTPN18Q99952 460 aa23.87■■□□□ 1.41
ATG4B-226ENST00000625810 PA2G4Q9UQ80 394 aaKnown RBP23.87■■□□□ 1.41
ATG4B-226ENST00000625810 TESPA1A2RU30 521 aaPredicted RBP23.86■■□□□ 1.41
ATG4B-226ENST00000625810 INTS3Q68E01 1043 aaKnown RBP23.86■■□□□ 1.41
ATG4B-226ENST00000625810 HHIPL2Q6UWX4 724 aa23.86■■□□□ 1.41
ATG4B-226ENST00000625810 CRHR2Q13324 411 aa23.85■■□□□ 1.41
ATG4B-226ENST00000625810 VGLL4Q14135 290 aa23.85■■□□□ 1.41
ATG4B-226ENST00000625810 OTUD7BQ6GQQ9 843 aa23.85■■□□□ 1.41
ATG4B-226ENST00000625810 APOBEC3HQ6NTF7 200 aaKnown RBP23.85■■□□□ 1.41
ATG4B-226ENST00000625810 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.85■■□□□ 1.41
ATG4B-226ENST00000625810 CNKSR2Q8WXI2 1034 aa23.85■■□□□ 1.41
ATG4B-226ENST00000625810 COPRSQ9NQ92 184 aa23.85■■□□□ 1.41
ATG4B-226ENST00000625810 PDE4DIPQ5VU43 2346 aa23.84■■□□□ 1.41
ATG4B-226ENST00000625810 MAP3K9P80192 1104 aa23.84■■□□□ 1.41
ATG4B-226ENST00000625810 FRAT1Q92837 279 aaPredicted RBP23.84■■□□□ 1.41
ATG4B-226ENST00000625810 MS4A4AQ96JQ5 239 aa23.84■■□□□ 1.41
ATG4B-226ENST00000625810 HTTP42858 3142 aa23.84■■□□□ 1.41
ATG4B-226ENST00000625810 FAM83AQ86UY5 434 aa23.83■■□□□ 1.41
ATG4B-226ENST00000625810 CSADQ9Y600 493 aa23.83■■□□□ 1.41
ATG4B-226ENST00000625810 SRGAP3O43295 1099 aa23.82■■□□□ 1.4
ATG4B-226ENST00000625810 FKBP1CQ5VVH2 108 aa23.82■■□□□ 1.4
ATG4B-226ENST00000625810 OTOP1Q7RTM1 612 aa23.82■■□□□ 1.4
ATG4B-226ENST00000625810 HOOK2Q96ED9 719 aa23.82■■□□□ 1.4
ATG4B-226ENST00000625810 DENND2AQ9ULE3 1009 aa23.82■■□□□ 1.4
ATG4B-226ENST00000625810 TRIM17Q9Y577 477 aa23.82■■□□□ 1.4
ATG4B-226ENST00000625810 BCAR3O75815 825 aa23.81■■□□□ 1.4
ATG4B-226ENST00000625810 LDHBP07195 334 aaKnown RBP23.81■■□□□ 1.4
ATG4B-226ENST00000625810 PHKA1P46020 1223 aa23.81■■□□□ 1.4
ATG4B-226ENST00000625810 BRI3BPQ8WY22 251 aa23.81■■□□□ 1.4
ATG4B-226ENST00000625810 SEMA3EO15041 775 aa23.8■■□□□ 1.4
ATG4B-226ENST00000625810 TRIM27P14373 513 aa23.8■■□□□ 1.4
ATG4B-226ENST00000625810 PRDX5P30044 214 aa23.8■■□□□ 1.4
ATG4B-226ENST00000625810 ATF7IPQ6VMQ6 1270 aa23.8■■□□□ 1.4
ATG4B-226ENST00000625810 RPAP1Q9BWH6 1393 aaPredicted RBP23.79■■□□□ 1.4
ATG4B-226ENST00000625810 DIXDC1Q155Q3 683 aa23.79■■□□□ 1.4
ATG4B-226ENST00000625810 CD99L2Q8TCZ2 262 aa23.79■■□□□ 1.4
ATG4B-226ENST00000625810 CLUAP1Q96AJ1 413 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms