RNA–Protein interactions for RNA: ENST00000625402.1

SCARNA4-202, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 129 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-202ENST00000625402 IKBKEQ14164 716 aa4.43□□□□□ -1.7
SCARNA4-202ENST00000625402 ZNF385CQ66K41 422 aaPredicted RBP4.43□□□□□ -1.7
SCARNA4-202ENST00000625402 FBXL19Q6PCT2 694 aa4.43□□□□□ -1.7
SCARNA4-202ENST00000625402 PDZD3Q86UT5 571 aa4.43□□□□□ -1.7
SCARNA4-202ENST00000625402 KIAA0825Q8IV33 1275 aa4.43□□□□□ -1.7
SCARNA4-202ENST00000625402 SULF2Q8IWU5 870 aa4.43□□□□□ -1.7
SCARNA4-202ENST00000625402 IL22RA1Q8N6P7 574 aa4.43□□□□□ -1.7
SCARNA4-202ENST00000625402 FBXO27Q8NI29 283 aa4.43□□□□□ -1.7
SCARNA4-202ENST00000625402 GRIN3AQ8TCU5 1115 aa4.43□□□□□ -1.7
SCARNA4-202ENST00000625402 EAF1Q96JC9 268 aaPredicted RBP4.43□□□□□ -1.7
SCARNA4-202ENST00000625402 USP35Q9P2H5 1018 aa4.43□□□□□ -1.7
SCARNA4-202ENST00000625402 ADAM11O75078 769 aa4.42□□□□□ -1.7
SCARNA4-202ENST00000625402 DEAF1O75398 565 aaPredicted RBP4.42□□□□□ -1.7
SCARNA4-202ENST00000625402 FGRP09769 529 aa4.42□□□□□ -1.7
SCARNA4-202ENST00000625402 NME2P22392 152 aa4.42□□□□□ -1.7
SCARNA4-202ENST00000625402 LORP23490 312 aaPredicted RBP4.42□□□□□ -1.7
SCARNA4-202ENST00000625402 LMNB2Q03252 620 aa4.42□□□□□ -1.7
SCARNA4-202ENST00000625402 ZNF252P-AS1Q0IIN9 211 aa4.42□□□□□ -1.7
SCARNA4-202ENST00000625402 CAMK2GQ13555 558 aaPredicted RBP4.42□□□□□ -1.7
SCARNA4-202ENST00000625402 SEPT6Q14141 434 aa4.42□□□□□ -1.7
SCARNA4-202ENST00000625402 BNC2Q6ZN30 1099 aaPredicted RBP4.42□□□□□ -1.7
SCARNA4-202ENST00000625402 GALNT11Q8NCW6 608 aa4.42□□□□□ -1.7
SCARNA4-202ENST00000625402 SLC7A3Q8WY07 619 aa4.42□□□□□ -1.7
SCARNA4-202ENST00000625402 GPRASP2Q96D09 838 aa4.42□□□□□ -1.7
SCARNA4-202ENST00000625402 TRIM11Q96F44 468 aa4.42□□□□□ -1.7
SCARNA4-202ENST00000625402 SPON2Q9BUD6 331 aa4.42□□□□□ -1.7
SCARNA4-202ENST00000625402 ZFYVE1Q9HBF4 777 aa4.42□□□□□ -1.7
SCARNA4-202ENST00000625402 PRDM6Q9NQX0 595 aa4.42□□□□□ -1.7
SCARNA4-202ENST00000625402 UBP1Q9NZI7 540 aa4.42□□□□□ -1.7
SCARNA4-202ENST00000625402 INPP5FQ9Y2H2 1132 aa4.42□□□□□ -1.7
SCARNA4-202ENST00000625402 FSCN2O14926 492 aa4.41□□□□□ -1.7
SCARNA4-202ENST00000625402 GREM1O60565 184 aa4.41□□□□□ -1.7
SCARNA4-202ENST00000625402 F13A1P00488 732 aa4.41□□□□□ -1.7
SCARNA4-202ENST00000625402 DNAJA1P31689 397 aaKnown RBP4.41□□□□□ -1.7
SCARNA4-202ENST00000625402 RPS26P62854 115 aaKnown RBP4.41□□□□□ -1.7
SCARNA4-202ENST00000625402 PWP1Q13610 501 aa4.41□□□□□ -1.7
SCARNA4-202ENST00000625402 SETDB1Q15047 1291 aa4.41□□□□□ -1.7
SCARNA4-202ENST00000625402 FOXD4L6Q3SYB3 417 aaPredicted RBP4.41□□□□□ -1.7
SCARNA4-202ENST00000625402 MSL1Q68DK7 614 aa4.41□□□□□ -1.7
SCARNA4-202ENST00000625402 FOXD4L3Q6VB84 417 aaPredicted RBP4.41□□□□□ -1.7
SCARNA4-202ENST00000625402 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.41□□□□□ -1.7
SCARNA4-202ENST00000625402 MCF2L2Q86YR7 1114 aa4.41□□□□□ -1.7
SCARNA4-202ENST00000625402 WFDC8Q8IUA0 241 aa4.41□□□□□ -1.7
SCARNA4-202ENST00000625402 RELL1Q8IUW5 271 aa4.41□□□□□ -1.7
SCARNA4-202ENST00000625402 TRIM42Q8IWZ5 723 aa4.41□□□□□ -1.7
SCARNA4-202ENST00000625402 SLC43A3Q8NBI5 491 aa4.41□□□□□ -1.7
SCARNA4-202ENST00000625402 GOLM1Q8NBJ4 401 aa4.41□□□□□ -1.7
SCARNA4-202ENST00000625402 RASGRP4Q8TDF6 673 aa4.41□□□□□ -1.7
SCARNA4-202ENST00000625402 ZNF296Q8WUU4 475 aaPredicted RBP4.41□□□□□ -1.7
SCARNA4-202ENST00000625402 KLHDC7BQ96G42 594 aa4.41□□□□□ -1.7
SCARNA4-202ENST00000625402 GMLQ99445 158 aa4.41□□□□□ -1.7
SCARNA4-202ENST00000625402 SOX17Q9H6I2 414 aaPredicted RBP4.41□□□□□ -1.7
SCARNA4-202ENST00000625402 LRRC4BQ9NT99 713 aa4.41□□□□□ -1.7
SCARNA4-202ENST00000625402 PRKAG2Q9UGJ0 569 aa4.41□□□□□ -1.7
SCARNA4-202ENST00000625402 PPME1Q9Y570 386 aa4.41□□□□□ -1.7
SCARNA4-202ENST00000625402 FAM221AA4D161 298 aa4.4□□□□□ -1.71
SCARNA4-202ENST00000625402 DLGAP3O95886 979 aa4.4□□□□□ -1.71
SCARNA4-202ENST00000625402 GSTP1P09211 210 aaKnown RBP4.4□□□□□ -1.71
SCARNA4-202ENST00000625402 RLBP1P12271 317 aa4.4□□□□□ -1.71
SCARNA4-202ENST00000625402 AMPD1P23109 780 aa4.4□□□□□ -1.71
SCARNA4-202ENST00000625402 CDK8P49336 464 aa4.4□□□□□ -1.71
SCARNA4-202ENST00000625402 CABP4P57796 275 aa4.4□□□□□ -1.71
SCARNA4-202ENST00000625402 NLRP12P59046 1061 aa4.4□□□□□ -1.71
SCARNA4-202ENST00000625402 SNRPNP63162 240 aaKnown RBP4.4□□□□□ -1.71
SCARNA4-202ENST00000625402 PIP4K2BP78356 416 aa4.4□□□□□ -1.71
SCARNA4-202ENST00000625402 GSTM4Q03013 218 aa4.4□□□□□ -1.71
SCARNA4-202ENST00000625402 PPP2R3AQ06190 1150 aa4.4□□□□□ -1.71
SCARNA4-202ENST00000625402 C19orf57Q0VDD7 668 aa4.4□□□□□ -1.71
SCARNA4-202ENST00000625402 SNAP47Q5SQN1 464 aa4.4□□□□□ -1.71
SCARNA4-202ENST00000625402 LLGL2Q6P1M3 1020 aa4.4□□□□□ -1.71
SCARNA4-202ENST00000625402 DMRTC2Q8IXT2 367 aaPredicted RBP4.4□□□□□ -1.71
SCARNA4-202ENST00000625402 TANGO6Q9C0B7 1094 aa4.4□□□□□ -1.71
SCARNA4-202ENST00000625402 ZC3H12CQ9C0D7 883 aaKnown RBP4.4□□□□□ -1.71
SCARNA4-202ENST00000625402 CACNA2D2Q9NY47 1150 aa4.4□□□□□ -1.71
SCARNA4-202ENST00000625402 KCNK4Q9NYG8 393 aa4.4□□□□□ -1.71
SCARNA4-202ENST00000625402 TLR3O15455 904 aaKnown RBP4.39□□□□□ -1.71
SCARNA4-202ENST00000625402 DDX3YO15523 660 aaKnown RBP4.39□□□□□ -1.71
SCARNA4-202ENST00000625402 ARHGEF15O94989 841 aa4.39□□□□□ -1.71
SCARNA4-202ENST00000625402 WISP1O95388 367 aa4.39□□□□□ -1.71
SCARNA4-202ENST00000625402 ATF4P18848 351 aaPredicted RBP4.39□□□□□ -1.71
SCARNA4-202ENST00000625402 MAOBP27338 520 aa4.39□□□□□ -1.71
SCARNA4-202ENST00000625402 ARNTP27540 789 aa4.39□□□□□ -1.71
SCARNA4-202ENST00000625402 MAP1SQ66K74 1059 aaPredicted RBP4.39□□□□□ -1.71
SCARNA4-202ENST00000625402 FAM196AQ6ZSG2 479 aa4.39□□□□□ -1.71
SCARNA4-202ENST00000625402 CACTIN-AS1Q8N1I8 211 aa4.39□□□□□ -1.71
SCARNA4-202ENST00000625402 SVOPQ8N4V2 548 aa4.39□□□□□ -1.71
SCARNA4-202ENST00000625402 WDR89Q96FK6 387 aaPredicted RBP4.39□□□□□ -1.71
SCARNA4-202ENST00000625402 LRRC3Q9BY71 257 aa4.39□□□□□ -1.71
SCARNA4-202ENST00000625402 CCDC86Q9H6F5 360 aaKnown RBP4.39□□□□□ -1.71
SCARNA4-202ENST00000625402 CBX8Q9HC52 389 aa4.39□□□□□ -1.71
SCARNA4-202ENST00000625402 GINM1Q9NU53 330 aa4.39□□□□□ -1.71
SCARNA4-202ENST00000625402 SUPT16HQ9Y5B9 1047 aaKnown RBP4.39□□□□□ -1.71
SCARNA4-202ENST00000625402 LOC100289279A0A1B0GTE1 492 aa4.38□□□□□ -1.71
SCARNA4-202ENST00000625402 WIPF1O43516 503 aa4.38□□□□□ -1.71
SCARNA4-202ENST00000625402 ZNF862O60290 1169 aa4.38□□□□□ -1.71
SCARNA4-202ENST00000625402 CILPO75339 1184 aa4.38□□□□□ -1.71
SCARNA4-202ENST00000625402 NASPP49321 788 aaPredicted RBP4.38□□□□□ -1.71
SCARNA4-202ENST00000625402 ARID5AQ03989 594 aa4.38□□□□□ -1.71
SCARNA4-202ENST00000625402 APOBRQ0VD83 1088 aa4.38□□□□□ -1.71
SCARNA4-202ENST00000625402 AP3B2Q13367 1082 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms