RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 LDHDQ86WU2 507 aa24.09■■□□□ 1.45
PDLIM2-221ENST00000622702 SMC1BQ8NDV3 1235 aa24.09■■□□□ 1.45
PDLIM2-221ENST00000622702 MYO3BQ8WXR4 1341 aa24.09■■□□□ 1.45
PDLIM2-221ENST00000622702 GOLIM4O00461 696 aa24.08■■□□□ 1.45
PDLIM2-221ENST00000622702 FKBP1AP62942 108 aaKnown RBP24.08■■□□□ 1.45
PDLIM2-221ENST00000622702 TTF1Q15361 905 aaPredicted RBP24.08■■□□□ 1.45
PDLIM2-221ENST00000622702 ZGPATQ8N5A5 531 aaKnown RBP24.08■■□□□ 1.45
PDLIM2-221ENST00000622702 EDC3Q96F86 508 aaKnown RBP24.08■■□□□ 1.45
PDLIM2-221ENST00000622702 ANTXR1Q9H6X2 564 aa24.08■■□□□ 1.45
PDLIM2-221ENST00000622702 USP17L8P0C7I0 530 aa24.07■■□□□ 1.44
PDLIM2-221ENST00000622702 SAMD7Q7Z3H4 446 aa24.07■■□□□ 1.44
PDLIM2-221ENST00000622702 EVI5LQ96CN4 794 aa24.07■■□□□ 1.44
PDLIM2-221ENST00000622702 ADAMTSL1Q8N6G6 1762 aa24.07■■□□□ 1.44
PDLIM2-221ENST00000622702 MAP4K4O95819 1239 aaPredicted RBP24.07■■□□□ 1.44
PDLIM2-221ENST00000622702 FSTL1Q12841 308 aa24.07■■□□□ 1.44
PDLIM2-221ENST00000622702 TBC1D10BQ4KMP7 808 aaPredicted RBP24.07■■□□□ 1.44
PDLIM2-221ENST00000622702 MFSD14BQ5SR56 506 aa24.07■■□□□ 1.44
PDLIM2-221ENST00000622702 CHADLQ6NUI6 762 aa24.07■■□□□ 1.44
PDLIM2-221ENST00000622702 TRPM4Q8TD43 1214 aa24.07■■□□□ 1.44
PDLIM2-221ENST00000622702 PIH1D3Q9NQM4 214 aaKnown RBP24.07■■□□□ 1.44
PDLIM2-221ENST00000622702 IGSF3O75054 1194 aa24.06■■□□□ 1.44
PDLIM2-221ENST00000622702 RBM26Q5T8P6 1007 aaKnown RBP24.06■■□□□ 1.44
PDLIM2-221ENST00000622702 TBC1D9Q6ZT07 1266 aa24.06■■□□□ 1.44
PDLIM2-221ENST00000622702 CNTROBQ8N137 903 aa24.06■■□□□ 1.44
PDLIM2-221ENST00000622702 CERS5Q8N5B7 392 aa24.06■■□□□ 1.44
PDLIM2-221ENST00000622702 SUGT1Q9Y2Z0 365 aa24.06■■□□□ 1.44
PDLIM2-221ENST00000622702 TRIM6-TRIM34B2RNG4 842 aa24.05■■□□□ 1.44
PDLIM2-221ENST00000622702 SDSP20132 328 aa24.05■■□□□ 1.44
PDLIM2-221ENST00000622702 HIRAP54198 1017 aaPredicted RBP24.05■■□□□ 1.44
PDLIM2-221ENST00000622702 ZNF280AP59817 542 aaPredicted RBP24.05■■□□□ 1.44
PDLIM2-221ENST00000622702 KIAA0825Q8IV33 1275 aa24.05■■□□□ 1.44
PDLIM2-221ENST00000622702 KBTBD3Q8NAB2 608 aa24.05■■□□□ 1.44
PDLIM2-221ENST00000622702 ABCF2Q9UG63 623 aa24.05■■□□□ 1.44
PDLIM2-221ENST00000622702 EGFRP00533 1210 aa24.04■■□□□ 1.44
PDLIM2-221ENST00000622702 SPTY2D1Q68D10 685 aaPredicted RBP24.04■■□□□ 1.44
PDLIM2-221ENST00000622702 TICAM2Q86XR7 235 aa24.04■■□□□ 1.44
PDLIM2-221ENST00000622702 OGFOD1Q8N543 542 aa24.04■■□□□ 1.44
PDLIM2-221ENST00000622702 DOCK2Q92608 1830 aa24.03■■□□□ 1.44
PDLIM2-221ENST00000622702 PRDX5P30044 214 aa24.02■■□□□ 1.44
PDLIM2-221ENST00000622702 KIF4BQ2VIQ3 1234 aa24.02■■□□□ 1.44
PDLIM2-221ENST00000622702 MAP1SQ66K74 1059 aaPredicted RBP24.02■■□□□ 1.44
PDLIM2-221ENST00000622702 ERICH6Q7L0X2 663 aa24.02■■□□□ 1.44
PDLIM2-221ENST00000622702 RILPL2Q969X0 211 aa24.02■■□□□ 1.44
PDLIM2-221ENST00000622702 MYOZ2Q9NPC6 264 aa24.02■■□□□ 1.44
PDLIM2-221ENST00000622702 LRP2BPQ9P2M1 347 aa24.02■■□□□ 1.44
PDLIM2-221ENST00000622702 RFX7Q2KHR2 1363 aa24.01■■□□□ 1.43
PDLIM2-221ENST00000622702 F8W031 263 aaPredicted RBP24.01■■□□□ 1.43
PDLIM2-221ENST00000622702 LDHBP07195 334 aaKnown RBP24.01■■□□□ 1.43
PDLIM2-221ENST00000622702 HDAC9Q9UKV0 1011 aa24.01■■□□□ 1.43
PDLIM2-221ENST00000622702 IDH1O75874 414 aaKnown RBP24■■□□□ 1.43
PDLIM2-221ENST00000622702 MAP3K12Q12852 859 aa24■■□□□ 1.43
PDLIM2-221ENST00000622702 GRIK5Q16478 980 aa24■■□□□ 1.43
PDLIM2-221ENST00000622702 FSD1Q9BTV5 496 aa24■■□□□ 1.43
PDLIM2-221ENST00000622702 DDX24Q9GZR7 859 aaKnown RBP eCLIP24■■□□□ 1.43
PDLIM2-221ENST00000622702 MYO5AQ9Y4I1 1855 aaKnown RBP24■■□□□ 1.43
PDLIM2-221ENST00000622702 MMP14P50281 582 aa24■■□□□ 1.43
PDLIM2-221ENST00000622702 TMED8Q6PL24 325 aaPredicted RBP24■■□□□ 1.43
PDLIM2-221ENST00000622702 ZC3H15Q8WU90 426 aaKnown RBP24■■□□□ 1.43
PDLIM2-221ENST00000622702 RAI14Q9P0K7 980 aa24■■□□□ 1.43
PDLIM2-221ENST00000622702 LRRFIP1Q32MZ4 808 aaKnown RBP23.99■■□□□ 1.43
PDLIM2-221ENST00000622702 PGAP2Q9UHJ9 254 aa23.99■■□□□ 1.43
PDLIM2-221ENST00000622702 AK9Q5TCS8 1911 aa23.98■■□□□ 1.43
PDLIM2-221ENST00000622702 ZSCAN25Q6NSZ9 544 aa23.98■■□□□ 1.43
PDLIM2-221ENST00000622702 NSUN4Q96CB9 384 aaKnown RBP23.98■■□□□ 1.43
PDLIM2-221ENST00000622702 MAST3O60307 1309 aa23.97■■□□□ 1.43
PDLIM2-221ENST00000622702 ZFYP08048 801 aaPredicted RBP23.97■■□□□ 1.43
PDLIM2-221ENST00000622702 MECOMQ03112 1051 aa23.97■■□□□ 1.43
PDLIM2-221ENST00000622702 DZIP1Q86YF9 867 aaKnown RBP23.97■■□□□ 1.43
PDLIM2-221ENST00000622702 ZNF384Q8TF68 577 aa23.97■■□□□ 1.43
PDLIM2-221ENST00000622702 TTF2Q9UNY4 1162 aaKnown RBP23.97■■□□□ 1.43
PDLIM2-221ENST00000622702 ITGBL1O95965 494 aaPredicted RBP23.96■■□□□ 1.43
PDLIM2-221ENST00000622702 PDE6AP16499 860 aa23.96■■□□□ 1.43
PDLIM2-221ENST00000622702 ADD2P35612 726 aa23.96■■□□□ 1.43
PDLIM2-221ENST00000622702 SLC9C2Q5TAH2 1124 aa23.96■■□□□ 1.43
PDLIM2-221ENST00000622702 MAST2Q6P0Q8 1798 aa23.96■■□□□ 1.43
PDLIM2-221ENST00000622702 MYH7P12883 1935 aa23.96■■□□□ 1.43
PDLIM2-221ENST00000622702 ASTN2O75129 1339 aaPredicted RBP23.96■■□□□ 1.43
PDLIM2-221ENST00000622702 RNF113AO15541 343 aaKnown RBP23.95■■□□□ 1.42
PDLIM2-221ENST00000622702 HSPA6P17066 643 aa23.95■■□□□ 1.42
PDLIM2-221ENST00000622702 HDLBPQ00341 1268 aaKnown RBP23.95■■□□□ 1.42
PDLIM2-221ENST00000622702 UBE3CQ15386 1083 aa23.95■■□□□ 1.42
PDLIM2-221ENST00000622702 NBPF9Q3BBW0 867 aa23.95■■□□□ 1.42
PDLIM2-221ENST00000622702 MAGEB6Q8N7X4 407 aa23.95■■□□□ 1.42
PDLIM2-221ENST00000622702 MRIQ9BWK5 157 aa23.95■■□□□ 1.42
PDLIM2-221ENST00000622702 TCRBV5S4A2TA0A5A2 114 aa23.94■■□□□ 1.42
PDLIM2-221ENST00000622702 HIP1O00291 1037 aa23.94■■□□□ 1.42
PDLIM2-221ENST00000622702 GSTO1P78417 241 aa23.94■■□□□ 1.42
PDLIM2-221ENST00000622702 NAA16Q6N069 864 aaPredicted RBP23.94■■□□□ 1.42
PDLIM2-221ENST00000622702 WNT10BO00744 389 aa23.94■■□□□ 1.42
PDLIM2-221ENST00000622702 DLGAP5Q15398 846 aa23.94■■□□□ 1.42
PDLIM2-221ENST00000622702 SLF2Q8IX21 1173 aa23.94■■□□□ 1.42
PDLIM2-221ENST00000622702 FAM163AQ96GL9 167 aaPredicted RBP23.94■■□□□ 1.42
PDLIM2-221ENST00000622702 GGA3Q9NZ52 723 aa23.94■■□□□ 1.42
PDLIM2-221ENST00000622702 ZNF532Q9HCE3 1301 aa23.93■■□□□ 1.42
PDLIM2-221ENST00000622702 POLR2AP24928 1970 aaKnown RBP23.93■■□□□ 1.42
PDLIM2-221ENST00000622702 RBM5P52756 815 aaKnown RBP eCLIP23.93■■□□□ 1.42
PDLIM2-221ENST00000622702 CFAP100Q494V2 611 aa23.93■■□□□ 1.42
PDLIM2-221ENST00000622702 DCPSQ96C86 337 aaKnown RBP23.93■■□□□ 1.42
PDLIM2-221ENST00000622702 GLIS2Q9BZE0 524 aaPredicted RBP23.93■■□□□ 1.42
PDLIM2-221ENST00000622702 PCDHAC2Q9Y5I4 1007 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms