RNA–Protein interactions for RNA: ENST00000622656.1

PCDHGC3-207, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 632 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-207ENST00000622656 SPDYE2Q495Y8 402 aa12.68□□□□□ -0.38
PCDHGC3-207ENST00000622656 LDLRAD1Q5T700 205 aa12.68□□□□□ -0.38
PCDHGC3-207ENST00000622656 DZIP1LQ8IYY4 767 aaKnown RBP12.68□□□□□ -0.38
PCDHGC3-207ENST00000622656 LPIN2Q92539 896 aa12.68□□□□□ -0.38
PCDHGC3-207ENST00000622656 CLMNQ96JQ2 1002 aa12.68□□□□□ -0.38
PCDHGC3-207ENST00000622656 COPRSQ9NQ92 184 aa12.68□□□□□ -0.38
PCDHGC3-207ENST00000622656 RNF186Q9NXI6 227 aa12.68□□□□□ -0.38
PCDHGC3-207ENST00000622656 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.68□□□□□ -0.38
PCDHGC3-207ENST00000622656 SERPINA10Q9UK55 444 aa12.68□□□□□ -0.38
PCDHGC3-207ENST00000622656 ANGEL1Q9UNK9 670 aaKnown RBP12.68□□□□□ -0.38
PCDHGC3-207ENST00000622656 MYH2Q9UKX2 1941 aa12.67□□□□□ -0.38
PCDHGC3-207ENST00000622656 PNMA6EA0A0J9YXQ4 647 aa12.67□□□□□ -0.38
PCDHGC3-207ENST00000622656 FRAT2O75474 233 aaPredicted RBP12.67□□□□□ -0.38
PCDHGC3-207ENST00000622656 SLC5A1P13866 664 aa12.67□□□□□ -0.38
PCDHGC3-207ENST00000622656 PHKA1P46020 1223 aa12.67□□□□□ -0.38
PCDHGC3-207ENST00000622656 TEPSINQ96N21 525 aa12.67□□□□□ -0.38
PCDHGC3-207ENST00000622656 CEP126Q9P2H0 1117 aa12.67□□□□□ -0.38
PCDHGC3-207ENST00000622656 TCP10L2B9ZVM9 353 aa12.66□□□□□ -0.38
PCDHGC3-207ENST00000622656 SRGAP3O43295 1099 aa12.66□□□□□ -0.38
PCDHGC3-207ENST00000622656 GNAI3P08754 354 aa12.66□□□□□ -0.38
PCDHGC3-207ENST00000622656 NF2P35240 595 aa12.66□□□□□ -0.38
PCDHGC3-207ENST00000622656 TIMM10P62072 90 aa12.66□□□□□ -0.38
PCDHGC3-207ENST00000622656 MTX1Q13505 466 aa12.66□□□□□ -0.38
PCDHGC3-207ENST00000622656 TMEM39BQ9GZU3 492 aa12.66□□□□□ -0.38
PCDHGC3-207ENST00000622656 AK9Q5TCS8 1911 aa12.65□□□□□ -0.38
PCDHGC3-207ENST00000622656 IPO8O15397 1037 aaKnown RBP12.65□□□□□ -0.38
PCDHGC3-207ENST00000622656 CA12O43570 354 aa12.65□□□□□ -0.38
PCDHGC3-207ENST00000622656 MYO1BO43795 1136 aa12.65□□□□□ -0.38
PCDHGC3-207ENST00000622656 USP2O75604 605 aaPredicted RBP12.65□□□□□ -0.38
PCDHGC3-207ENST00000622656 PRDX5P30044 214 aa12.65□□□□□ -0.38
PCDHGC3-207ENST00000622656 IL15P40933 162 aaPredicted RBP12.65□□□□□ -0.38
PCDHGC3-207ENST00000622656 TFCP2Q12800 502 aa12.65□□□□□ -0.38
PCDHGC3-207ENST00000622656 ZKSCAN2Q63HK3 967 aa12.65□□□□□ -0.38
PCDHGC3-207ENST00000622656 APOBEC3HQ6NTF7 200 aaKnown RBP12.65□□□□□ -0.38
PCDHGC3-207ENST00000622656 ARMC9Q7Z3E5 817 aa12.65□□□□□ -0.38
PCDHGC3-207ENST00000622656 FBXO3Q9UK99 471 aa12.65□□□□□ -0.38
PCDHGC3-207ENST00000622656 MYO5AQ9Y4I1 1855 aaKnown RBP12.65□□□□□ -0.38
PCDHGC3-207ENST00000622656 ZBED9Q6R2W3 1325 aa12.64□□□□□ -0.39
PCDHGC3-207ENST00000622656 GJA5P36382 358 aa12.64□□□□□ -0.39
PCDHGC3-207ENST00000622656 DIXDC1Q155Q3 683 aa12.64□□□□□ -0.39
PCDHGC3-207ENST00000622656 MAP3K11Q16584 847 aa12.64□□□□□ -0.39
PCDHGC3-207ENST00000622656 TBC1D22AQ8WUA7 517 aa12.64□□□□□ -0.39
PCDHGC3-207ENST00000622656 TEKT1Q969V4 418 aa12.64□□□□□ -0.39
PCDHGC3-207ENST00000622656 ABHD8Q96I13 439 aa12.64□□□□□ -0.39
PCDHGC3-207ENST00000622656 R3HDMLQ9H3Y0 253 aa12.64□□□□□ -0.39
PCDHGC3-207ENST00000622656 C1orf115Q9H7X2 142 aa12.64□□□□□ -0.39
PCDHGC3-207ENST00000622656 PPP2R3BQ9Y5P8 575 aa12.64□□□□□ -0.39
PCDHGC3-207ENST00000622656 A0A1B0GUL7 405 aa12.63□□□□□ -0.39
PCDHGC3-207ENST00000622656 TBC1D8O95759 1140 aa12.63□□□□□ -0.39
PCDHGC3-207ENST00000622656 GNAI2P04899 355 aa12.63□□□□□ -0.39
PCDHGC3-207ENST00000622656 HDLBPQ00341 1268 aaKnown RBP12.63□□□□□ -0.39
PCDHGC3-207ENST00000622656 SPRYD7Q5W111 196 aa12.63□□□□□ -0.39
PCDHGC3-207ENST00000622656 CCDC102BQ68D86 513 aa12.63□□□□□ -0.39
PCDHGC3-207ENST00000622656 ZDHHC15Q96MV8 337 aa12.63□□□□□ -0.39
PCDHGC3-207ENST00000622656 SAGE1Q9NXZ1 904 aa12.63□□□□□ -0.39
PCDHGC3-207ENST00000622656 TM4SF4P48230 202 aa12.62□□□□□ -0.39
PCDHGC3-207ENST00000622656 RASGRF1Q13972 1273 aa12.62□□□□□ -0.39
PCDHGC3-207ENST00000622656 SUPT20HL1Q3ZLR7 823 aa12.62□□□□□ -0.39
PCDHGC3-207ENST00000622656 PI16Q6UXB8 463 aa12.62□□□□□ -0.39
PCDHGC3-207ENST00000622656 WDR66Q8TBY9 1149 aa12.62□□□□□ -0.39
PCDHGC3-207ENST00000622656 CNKSR2Q8WXI2 1034 aa12.62□□□□□ -0.39
PCDHGC3-207ENST00000622656 XAGE2Q96GT9 111 aa12.62□□□□□ -0.39
PCDHGC3-207ENST00000622656 WNK4Q96J92 1243 aa12.62□□□□□ -0.39
PCDHGC3-207ENST00000622656 MCOLN1Q9GZU1 580 aa12.62□□□□□ -0.39
PCDHGC3-207ENST00000622656 HDAC5Q9UQL6 1122 aa12.62□□□□□ -0.39
PCDHGC3-207ENST00000622656 DAGLAQ9Y4D2 1042 aa12.62□□□□□ -0.39
PCDHGC3-207ENST00000622656 ZBTB7BO15156 539 aaPredicted RBP12.61□□□□□ -0.39
PCDHGC3-207ENST00000622656 PPP1R12BO60237 982 aaPredicted RBP12.61□□□□□ -0.39
PCDHGC3-207ENST00000622656 HHIPL2Q6UWX4 724 aa12.61□□□□□ -0.39
PCDHGC3-207ENST00000622656 SLC10A4Q96EP9 437 aa12.61□□□□□ -0.39
PCDHGC3-207ENST00000622656 MRIQ9BWK5 157 aa12.61□□□□□ -0.39
PCDHGC3-207ENST00000622656 NFIAQ12857 509 aa12.6□□□□□ -0.39
PCDHGC3-207ENST00000622656 DGKZQ13574 1117 aa12.6□□□□□ -0.39
PCDHGC3-207ENST00000622656 TNFAIP1Q13829 316 aa12.6□□□□□ -0.39
PCDHGC3-207ENST00000622656 POLA2Q14181 598 aa12.6□□□□□ -0.39
PCDHGC3-207ENST00000622656 CDC42EP5Q6NZY7 148 aa12.6□□□□□ -0.39
PCDHGC3-207ENST00000622656 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.6□□□□□ -0.39
PCDHGC3-207ENST00000622656 PANK1Q8TE04 598 aa12.6□□□□□ -0.39
PCDHGC3-207ENST00000622656 ZNF384Q8TF68 577 aa12.6□□□□□ -0.39
PCDHGC3-207ENST00000622656 ELP3Q9H9T3 547 aa12.6□□□□□ -0.39
PCDHGC3-207ENST00000622656 SUGT1Q9Y2Z0 365 aa12.6□□□□□ -0.39
PCDHGC3-207ENST00000622656 SALL1Q9NSC2 1324 aa12.6□□□□□ -0.39
PCDHGC3-207ENST00000622656 IGF2BP3O00425 579 aaKnown RBP eCLIP12.59□□□□□ -0.39
PCDHGC3-207ENST00000622656 LDHBP07195 334 aaKnown RBP12.59□□□□□ -0.39
PCDHGC3-207ENST00000622656 ATP8B2P98198 1209 aa12.59□□□□□ -0.39
PCDHGC3-207ENST00000622656 ITPRIPQ8IWB1 547 aa12.59□□□□□ -0.39
PCDHGC3-207ENST00000622656 ZFPM1Q8IX07 1006 aa12.59□□□□□ -0.39
PCDHGC3-207ENST00000622656 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.59□□□□□ -0.39
PCDHGC3-207ENST00000622656 NEUROD6Q96NK8 337 aa12.59□□□□□ -0.39
PCDHGC3-207ENST00000622656 DENND2AQ9ULE3 1009 aa12.59□□□□□ -0.39
PCDHGC3-207ENST00000622656 MAST3O60307 1309 aa12.59□□□□□ -0.39
PCDHGC3-207ENST00000622656 DOCK2Q92608 1830 aa12.58□□□□□ -0.4
PCDHGC3-207ENST00000622656 SEMA3EO15041 775 aa12.58□□□□□ -0.4
PCDHGC3-207ENST00000622656 SLURP2P0DP57 97 aa12.58□□□□□ -0.4
PCDHGC3-207ENST00000622656 IREB2P48200 963 aaKnown RBP12.58□□□□□ -0.4
PCDHGC3-207ENST00000622656 TNNI2P48788 182 aa12.58□□□□□ -0.4
PCDHGC3-207ENST00000622656 VGLL4Q14135 290 aa12.58□□□□□ -0.4
PCDHGC3-207ENST00000622656 FTSJ3Q8IY81 847 aaKnown RBP12.58□□□□□ -0.4
PCDHGC3-207ENST00000622656 REM2Q8IYK8 340 aaPredicted RBP12.58□□□□□ -0.4
PCDHGC3-207ENST00000622656 ANKRD13AQ8IZ07 590 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms