RNA–Protein interactions for RNA: ENST00000621217.4

GGA3-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 4,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-222ENST00000621217 TSPY2A6NKD2 308 aa10.49□□□□□ -0.73
GGA3-222ENST00000621217 PDIA6Q15084 440 aa10.49□□□□□ -0.73
GGA3-222ENST00000621217 FAM200AQ8TCP9 573 aa10.49□□□□□ -0.73
GGA3-222ENST00000621217 GPR101Q96P66 508 aaPredicted RBP10.49□□□□□ -0.73
GGA3-222ENST00000621217 GJB4Q9NTQ9 266 aa10.49□□□□□ -0.73
GGA3-222ENST00000621217 C3P01024 1663 aa10.49□□□□□ -0.73
GGA3-222ENST00000621217 ZNF532Q9HCE3 1301 aa10.49□□□□□ -0.73
GGA3-222ENST00000621217 hCG_1642624A0A1W2PR95 340 aa10.49□□□□□ -0.73
GGA3-222ENST00000621217 NR1I2O75469 434 aa10.49□□□□□ -0.73
GGA3-222ENST00000621217 PCCAP05165 728 aaPredicted RBP10.49□□□□□ -0.73
GGA3-222ENST00000621217 PUM3Q15397 648 aaKnown RBP10.49□□□□□ -0.73
GGA3-222ENST00000621217 CCDC102BQ68D86 513 aa10.49□□□□□ -0.73
GGA3-222ENST00000621217 UBR1Q8IWV7 1749 aa10.49□□□□□ -0.73
GGA3-222ENST00000621217 PHKBQ93100 1093 aa10.49□□□□□ -0.73
GGA3-222ENST00000621217 TRERF1Q96PN7 1200 aa10.49□□□□□ -0.73
GGA3-222ENST00000621217 SPDYE4A6NLX3 237 aa10.48□□□□□ -0.73
GGA3-222ENST00000621217 CTDSPL2Q05D32 466 aa10.48□□□□□ -0.73
GGA3-222ENST00000621217 NECTIN1Q15223 517 aa10.48□□□□□ -0.73
GGA3-222ENST00000621217 E7EWF7 191 aa10.48□□□□□ -0.73
GGA3-222ENST00000621217 DDIT3P35638 169 aa10.48□□□□□ -0.73
GGA3-222ENST00000621217 IARSP41252 1262 aaKnown RBP10.48□□□□□ -0.73
GGA3-222ENST00000621217 ERFEQ4G0M1 354 aa10.48□□□□□ -0.73
GGA3-222ENST00000621217 SPECC1Q5M775 1068 aa10.48□□□□□ -0.73
GGA3-222ENST00000621217 CMTR1Q8N1G2 835 aaKnown RBP10.48□□□□□ -0.73
GGA3-222ENST00000621217 AOPEPQ8N6M6 819 aa10.48□□□□□ -0.73
GGA3-222ENST00000621217 ALG1Q9BT22 464 aa10.48□□□□□ -0.73
GGA3-222ENST00000621217 ARHGAP23Q9P227 1491 aa10.48□□□□□ -0.73
GGA3-222ENST00000621217 HSPD1P10809 573 aaKnown RBP10.48□□□□□ -0.73
GGA3-222ENST00000621217 ST5P78524 1137 aa10.48□□□□□ -0.73
GGA3-222ENST00000621217 CFAP100Q494V2 611 aa10.48□□□□□ -0.73
GGA3-222ENST00000621217 SEPT12Q8IYM1 358 aa10.48□□□□□ -0.73
GGA3-222ENST00000621217 MARCH10Q8NA82 808 aaPredicted RBP10.48□□□□□ -0.73
GGA3-222ENST00000621217 MEGF6O75095 1541 aa10.48□□□□□ -0.73
GGA3-222ENST00000621217 USP32Q8NFA0 1604 aa10.48□□□□□ -0.73
GGA3-222ENST00000621217 TPM1P09493 284 aa10.47□□□□□ -0.73
GGA3-222ENST00000621217 SDR42E1Q8WUS8 393 aa10.47□□□□□ -0.73
GGA3-222ENST00000621217 NOL7Q9UMY1 257 aaKnown RBP10.47□□□□□ -0.73
GGA3-222ENST00000621217 MST1RQ04912 1400 aa10.47□□□□□ -0.73
GGA3-222ENST00000621217 IL6STP40189 918 aaPredicted RBP10.47□□□□□ -0.73
GGA3-222ENST00000621217 PARP10Q53GL7 1025 aa10.47□□□□□ -0.73
GGA3-222ENST00000621217 TTLL11Q8NHH1 800 aa10.47□□□□□ -0.73
GGA3-222ENST00000621217 MCM9Q9NXL9 1143 aa10.47□□□□□ -0.73
GGA3-222ENST00000621217 AATFQ9NY61 560 aaKnown RBP eCLIP10.47□□□□□ -0.73
GGA3-222ENST00000621217 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.47□□□□□ -0.739e-6■■□□□ 14.3
GGA3-222ENST00000621217 V9GYY5 206 aaPredicted RBP10.47□□□□□ -0.73
GGA3-222ENST00000621217 SOS2Q07890 1332 aaPredicted RBP10.47□□□□□ -0.73
GGA3-222ENST00000621217 PALLDQ8WX93 1383 aa10.47□□□□□ -0.73
GGA3-222ENST00000621217 ZFYP08048 801 aaPredicted RBP10.47□□□□□ -0.73
GGA3-222ENST00000621217 XBP1P17861 261 aa10.47□□□□□ -0.73
GGA3-222ENST00000621217 IQCA1Q86XH1 822 aa10.47□□□□□ -0.73
GGA3-222ENST00000621217 SAP30BPQ9UHR5 308 aaKnown RBP10.47□□□□□ -0.73
GGA3-222ENST00000621217 A0A0G2JLW4 131 aa10.47□□□□□ -0.73
GGA3-222ENST00000621217 UFL1O94874 794 aa10.47□□□□□ -0.73
GGA3-222ENST00000621217 CYP19A1P11511 503 aaPredicted RBP10.47□□□□□ -0.73
GGA3-222ENST00000621217 LMOD1P29536 600 aaPredicted RBP10.47□□□□□ -0.73
GGA3-222ENST00000621217 RPS8P62241 208 aaKnown RBP10.47□□□□□ -0.73
GGA3-222ENST00000621217 SCRN1Q12765 414 aa10.47□□□□□ -0.73
GGA3-222ENST00000621217 ZNF444Q8N0Y2 327 aaPredicted RBP10.47□□□□□ -0.73
GGA3-222ENST00000621217 PLCD3Q8N3E9 789 aa10.47□□□□□ -0.73
GGA3-222ENST00000621217 TM6SF1Q9BZW5 370 aa10.47□□□□□ -0.73
GGA3-222ENST00000621217 SSH2Q76I76 1423 aa10.47□□□□□ -0.73
GGA3-222ENST00000621217 CEMIPQ8WUJ3 1361 aa10.46□□□□□ -0.73
GGA3-222ENST00000621217 SLIT1O75093 1534 aa10.46□□□□□ -0.73
GGA3-222ENST00000621217 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.46□□□□□ -0.73
GGA3-222ENST00000621217 CCP110O43303 1012 aa10.46□□□□□ -0.73
GGA3-222ENST00000621217 CYP2E1P05181 493 aaPredicted RBP10.46□□□□□ -0.73
GGA3-222ENST00000621217 SPATA5Q8NB90 893 aa10.46□□□□□ -0.73
GGA3-222ENST00000621217 LPIN2Q92539 896 aa10.46□□□□□ -0.73
GGA3-222ENST00000621217 ZSCAN16Q9H4T2 348 aaPredicted RBP10.46□□□□□ -0.73
GGA3-222ENST00000621217 ANO10Q9NW15 660 aa10.46□□□□□ -0.73
GGA3-222ENST00000621217 H7C1W4 665 aa10.46□□□□□ -0.74
GGA3-222ENST00000621217 IGSF3O75054 1194 aa10.46□□□□□ -0.74
GGA3-222ENST00000621217 PDE8BO95263 885 aa10.46□□□□□ -0.74
GGA3-222ENST00000621217 CHRNDQ07001 517 aa10.46□□□□□ -0.74
GGA3-222ENST00000621217 DHX8Q14562 1220 aaKnown RBP10.46□□□□□ -0.74
GGA3-222ENST00000621217 GTF3C6Q969F1 213 aa10.46□□□□□ -0.74
GGA3-222ENST00000621217 KAZALD1Q96I82 304 aa10.46□□□□□ -0.74
GGA3-222ENST00000621217 USP28Q96RU2 1077 aa10.46□□□□□ -0.74
GGA3-222ENST00000621217 PPP1R9BQ96SB3 815 aa10.46□□□□□ -0.74
GGA3-222ENST00000621217 HAUS7Q99871 368 aa10.46□□□□□ -0.74
GGA3-222ENST00000621217 MAGEB6P1A0A0J9YX57 407 aa10.46□□□□□ -0.74
GGA3-222ENST00000621217 ZBTB43O43298 467 aa10.46□□□□□ -0.74
GGA3-222ENST00000621217 TNNT1P13805 278 aa10.46□□□□□ -0.74
GGA3-222ENST00000621217 TSR1Q2NL82 804 aaKnown RBP10.46□□□□□ -0.74
GGA3-222ENST00000621217 TMC6Q7Z403 805 aa10.46□□□□□ -0.74
GGA3-222ENST00000621217 JMYQ8N9B5 988 aa10.46□□□□□ -0.74
GGA3-222ENST00000621217 APPBP2Q92624 585 aa10.46□□□□□ -0.74
GGA3-222ENST00000621217 CBX8Q9HC52 389 aa10.46□□□□□ -0.74
GGA3-222ENST00000621217 ADD1P35611 737 aaKnown RBP10.45□□□□□ -0.74
GGA3-222ENST00000621217 LRMPQ12912 555 aa10.45□□□□□ -0.74
GGA3-222ENST00000621217 COL9A3Q14050 684 aaPredicted RBP10.45□□□□□ -0.74
GGA3-222ENST00000621217 PCMTD1Q96MG8 357 aaPredicted RBP10.45□□□□□ -0.74
GGA3-222ENST00000621217 TTC14Q96N46 770 aa10.45□□□□□ -0.74
GGA3-222ENST00000621217 ZC3H12CQ9C0D7 883 aaKnown RBP10.45□□□□□ -0.74
GGA3-222ENST00000621217 NYXQ9GZU5 481 aa10.45□□□□□ -0.74
GGA3-222ENST00000621217 CDKL5O76039 1030 aa10.45□□□□□ -0.74
GGA3-222ENST00000621217 FGAP02671 866 aa10.45□□□□□ -0.74
GGA3-222ENST00000621217 SCARF1Q14162 830 aa10.45□□□□□ -0.74
GGA3-222ENST00000621217 WTAPQ15007 396 aa10.45□□□□□ -0.74
GGA3-222ENST00000621217 TRMT1LQ7Z2T5 733 aaKnown RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms