RNA–Protein interactions for RNA: ENST00000621152.4

SMC6-210, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 3

Gene SMC6, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-210ENST00000621152 IL15P40933 162 aaPredicted RBP25.54■■□□□ 1.68
SMC6-210ENST00000621152 SPDYE2Q495Y8 402 aa25.54■■□□□ 1.68
SMC6-210ENST00000621152 LDLRAD1Q5T700 205 aa25.54■■□□□ 1.68
SMC6-210ENST00000621152 NBPF12Q5TAG4 269 aaPredicted RBP25.54■■□□□ 1.68
SMC6-210ENST00000621152 COPRSQ9NQ92 184 aa25.54■■□□□ 1.68
SMC6-210ENST00000621152 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.54■■□□□ 1.68
SMC6-210ENST00000621152 PPP1R12BO60237 982 aaPredicted RBP25.53■■□□□ 1.68
SMC6-210ENST00000621152 HDLBPQ00341 1268 aaKnown RBP25.53■■□□□ 1.68
SMC6-210ENST00000621152 MKRN3Q13064 507 aaKnown RBP25.53■■□□□ 1.68
SMC6-210ENST00000621152 ATP2B3Q16720 1220 aa25.53■■□□□ 1.68
SMC6-210ENST00000621152 SAGE1Q9NXZ1 904 aa25.53■■□□□ 1.68
SMC6-210ENST00000621152 SLC10A4Q96EP9 437 aa25.52■■□□□ 1.68
SMC6-210ENST00000621152 SRGAP3O43295 1099 aa25.51■■□□□ 1.67
SMC6-210ENST00000621152 TNFAIP1Q13829 316 aa25.51■■□□□ 1.67
SMC6-210ENST00000621152 TEKT1Q969V4 418 aa25.51■■□□□ 1.67
SMC6-210ENST00000621152 MRIQ9BWK5 157 aa25.51■■□□□ 1.67
SMC6-210ENST00000621152 COL1A1P02452 1464 aaPredicted RBP25.51■■□□□ 1.67
SMC6-210ENST00000621152 TCP10L2B9ZVM9 353 aa25.5■■□□□ 1.67
SMC6-210ENST00000621152 ZKSCAN2Q63HK3 967 aa25.5■■□□□ 1.67
SMC6-210ENST00000621152 WDR66Q8TBY9 1149 aa25.5■■□□□ 1.67
SMC6-210ENST00000621152 ABHD8Q96I13 439 aa25.5■■□□□ 1.67
SMC6-210ENST00000621152 GNL3LQ9NVN8 582 aaKnown RBP25.5■■□□□ 1.67
SMC6-210ENST00000621152 SUGT1Q9Y2Z0 365 aa25.5■■□□□ 1.67
SMC6-210ENST00000621152 GNAI2P04899 355 aa25.49■■□□□ 1.67
SMC6-210ENST00000621152 MAP3K11Q16584 847 aa25.49■■□□□ 1.67
SMC6-210ENST00000621152 USP2O75604 605 aaPredicted RBP25.48■■□□□ 1.67
SMC6-210ENST00000621152 TM4SF4P48230 202 aa25.48■■□□□ 1.67
SMC6-210ENST00000621152 TNNI2P48788 182 aa25.47■■□□□ 1.67
SMC6-210ENST00000621152 TIMM10P62072 90 aa25.47■■□□□ 1.67
SMC6-210ENST00000621152 MTX1Q13505 466 aa25.47■■□□□ 1.67
SMC6-210ENST00000621152 SPRYD7Q5W111 196 aa25.47■■□□□ 1.67
SMC6-210ENST00000621152 TMEM57Q8N5G2 664 aa25.47■■□□□ 1.67
SMC6-210ENST00000621152 ZDHHC15Q96MV8 337 aa25.47■■□□□ 1.67
SMC6-210ENST00000621152 IREB2P48200 963 aaKnown RBP25.46■■□□□ 1.67
SMC6-210ENST00000621152 CLMNQ96JQ2 1002 aa25.46■■□□□ 1.67
SMC6-210ENST00000621152 MAST3O60307 1309 aa25.45■■□□□ 1.66
SMC6-210ENST00000621152 ADORA1P30542 326 aa25.45■■□□□ 1.66
SMC6-210ENST00000621152 PHKA1P46020 1223 aa25.45■■□□□ 1.66
SMC6-210ENST00000621152 DGKZQ13574 1117 aa25.45■■□□□ 1.66
SMC6-210ENST00000621152 APOBEC3HQ6NTF7 200 aaKnown RBP25.45■■□□□ 1.66
SMC6-210ENST00000621152 HHIPL2Q6UWX4 724 aa25.45■■□□□ 1.66
SMC6-210ENST00000621152 TMEM39BQ9GZU3 492 aa25.45■■□□□ 1.66
SMC6-210ENST00000621152 UNCXA6NJT0 531 aa25.44■■□□□ 1.66
SMC6-210ENST00000621152 CACNB3P54284 484 aa25.44■■□□□ 1.66
SMC6-210ENST00000621152 TFCP2Q12800 502 aa25.44■■□□□ 1.66
SMC6-210ENST00000621152 TEPSINQ96N21 525 aa25.44■■□□□ 1.66
SMC6-210ENST00000621152 MCOLN1Q9GZU1 580 aa25.44■■□□□ 1.66
SMC6-210ENST00000621152 DENND2AQ9ULE3 1009 aa25.44■■□□□ 1.66
SMC6-210ENST00000621152 AKAP2Q9Y2D5 859 aa25.44■■□□□ 1.66
SMC6-210ENST00000621152 CASP8AP2Q9UKL3 1982 aa25.44■■□□□ 1.66
SMC6-210ENST00000621152 SSC5DA1L4H1 1573 aa25.44■■□□□ 1.66
SMC6-210ENST00000621152 TBC1D8O95759 1140 aa25.43■■□□□ 1.66
SMC6-210ENST00000621152 SREBF2Q12772 1141 aa25.43■■□□□ 1.66
SMC6-210ENST00000621152 CDAN1Q8IWY9 1227 aa25.43■■□□□ 1.66
SMC6-210ENST00000621152 TMOD2Q9NZR1 351 aa25.43■■□□□ 1.66
SMC6-210ENST00000621152 CCDC102BQ68D86 513 aa25.42■■□□□ 1.66
SMC6-210ENST00000621152 ANKRD13AQ8IZ07 590 aa25.42■■□□□ 1.66
SMC6-210ENST00000621152 WNK4Q96J92 1243 aa25.42■■□□□ 1.66
SMC6-210ENST00000621152 ECM29Q5VYK3 1845 aa25.42■■□□□ 1.66
SMC6-210ENST00000621152 PNMA6EA0A0J9YXQ4 647 aa25.41■■□□□ 1.66
SMC6-210ENST00000621152 SEMA3EO15041 775 aa25.41■■□□□ 1.66
SMC6-210ENST00000621152 LDHBP07195 334 aaKnown RBP25.41■■□□□ 1.66
SMC6-210ENST00000621152 G3BP1Q13283 466 aaKnown RBP eCLIP25.41■■□□□ 1.66
SMC6-210ENST00000621152 NEUROD6Q96NK8 337 aa25.41■■□□□ 1.66
SMC6-210ENST00000621152 ZBED9Q6R2W3 1325 aa25.4■■□□□ 1.66
SMC6-210ENST00000621152 AKAP11Q9UKA4 1901 aa25.4■■□□□ 1.66
SMC6-210ENST00000621152 A0A1B0GUL7 405 aa25.4■■□□□ 1.66
SMC6-210ENST00000621152 CCDC85CA6NKD9 419 aa25.4■■□□□ 1.66
SMC6-210ENST00000621152 INHBEP58166 350 aa25.4■■□□□ 1.66
SMC6-210ENST00000621152 XAGE2Q96GT9 111 aa25.4■■□□□ 1.66
SMC6-210ENST00000621152 MANSC4A6NHS7 340 aaPredicted RBP25.39■■□□□ 1.66
SMC6-210ENST00000621152 PRDX5P30044 214 aa25.39■■□□□ 1.66
SMC6-210ENST00000621152 DIXDC1Q155Q3 683 aa25.39■■□□□ 1.66
SMC6-210ENST00000621152 FTSJ3Q8IY81 847 aaKnown RBP25.39■■□□□ 1.66
SMC6-210ENST00000621152 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.39■■□□□ 1.66
SMC6-210ENST00000621152 ZBTB48P10074 688 aaPredicted RBP25.38■■□□□ 1.65
SMC6-210ENST00000621152 MAP3K9P80192 1104 aa25.38■■□□□ 1.65
SMC6-210ENST00000621152 FKBP1CQ5VVH2 108 aa25.38■■□□□ 1.65
SMC6-210ENST00000621152 FAM83AQ86UY5 434 aa25.38■■□□□ 1.65
SMC6-210ENST00000621152 ELP3Q9H9T3 547 aa25.37■■□□□ 1.65
SMC6-210ENST00000621152 DAGLAQ9Y4D2 1042 aa25.37■■□□□ 1.65
SMC6-210ENST00000621152 ARAP2Q8WZ64 1704 aa25.37■■□□□ 1.65
SMC6-210ENST00000621152 SALL1Q9NSC2 1324 aa25.37■■□□□ 1.65
SMC6-210ENST00000621152 ATP8B2P98198 1209 aa25.36■■□□□ 1.65
SMC6-210ENST00000621152 MVPQ14764 893 aaKnown RBP25.36■■□□□ 1.65
SMC6-210ENST00000621152 GORABQ5T7V8 394 aa25.36■■□□□ 1.65
SMC6-210ENST00000621152 CDC42EP5Q6NZY7 148 aa25.36■■□□□ 1.65
SMC6-210ENST00000621152 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.36■■□□□ 1.65
SMC6-210ENST00000621152 ITPRIPQ8IWB1 547 aa25.36■■□□□ 1.65
SMC6-210ENST00000621152 ZGPATQ8N5A5 531 aaKnown RBP25.36■■□□□ 1.65
SMC6-210ENST00000621152 ZBTB7BO15156 539 aaPredicted RBP25.35■■□□□ 1.65
SMC6-210ENST00000621152 ZBTB22O15209 634 aa25.35■■□□□ 1.65
SMC6-210ENST00000621152 RLBP1P12271 317 aa25.35■■□□□ 1.65
SMC6-210ENST00000621152 GJA5P36382 358 aa25.35■■□□□ 1.65
SMC6-210ENST00000621152 IFNL1Q8IU54 200 aa25.35■■□□□ 1.65
SMC6-210ENST00000621152 USP40Q9NVE5 1235 aa25.35■■□□□ 1.65
SMC6-210ENST00000621152 ABCF2Q9UG63 623 aa25.35■■□□□ 1.65
SMC6-210ENST00000621152 GPR25O00155 361 aa25.34■■□□□ 1.65
SMC6-210ENST00000621152 ALDH1A1P00352 501 aa25.34■■□□□ 1.65
SMC6-210ENST00000621152 RASGRF1Q13972 1273 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms