RNA–Protein interactions for RNA: ENST00000618777.4

CNTNAP3B-214, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 5,256 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-214ENST00000618777 ZSCAN29Q8IWY8 852 aaPredicted RBP18.42■□□□□ 0.54
CNTNAP3B-214ENST00000618777 HDAC9Q9UKV0 1011 aa18.42■□□□□ 0.54
CNTNAP3B-214ENST00000618777 CHUKO15111 745 aa18.42■□□□□ 0.54
CNTNAP3B-214ENST00000618777 ZBTB43O43298 467 aa18.42■□□□□ 0.54
CNTNAP3B-214ENST00000618777 RASEFQ8IZ41 740 aa18.42■□□□□ 0.54
CNTNAP3B-214ENST00000618777 EHMT1Q9H9B1 1298 aa18.42■□□□□ 0.54
CNTNAP3B-214ENST00000618777 HSPA1LP34931 641 aa18.41■□□□□ 0.54
CNTNAP3B-214ENST00000618777 GSDMBQ8TAX9 411 aa18.41■□□□□ 0.54
CNTNAP3B-214ENST00000618777 YY1AP1Q9H869 796 aa18.41■□□□□ 0.54
CNTNAP3B-214ENST00000618777 BCAP29Q9UHQ4 241 aa18.41■□□□□ 0.54
CNTNAP3B-214ENST00000618777 PDS5BQ9NTI5 1447 aa18.41■□□□□ 0.54
CNTNAP3B-214ENST00000618777 TRIM75PA6NK02 468 aa18.41■□□□□ 0.54
CNTNAP3B-214ENST00000618777 EFCAB8A8MWE9 144 aa18.41■□□□□ 0.54
CNTNAP3B-214ENST00000618777 POLE2P56282 527 aa18.41■□□□□ 0.54
CNTNAP3B-214ENST00000618777 FBXO18Q8NFZ0 1043 aa18.41■□□□□ 0.54
CNTNAP3B-214ENST00000618777 HSP90AA5PQ58FG0 334 aa18.41■□□□□ 0.54
CNTNAP3B-214ENST00000618777 TADA2BQ86TJ2 420 aa18.41■□□□□ 0.54
CNTNAP3B-214ENST00000618777 STK38LQ9Y2H1 464 aa18.41■□□□□ 0.54
CNTNAP3B-214ENST00000618777 TMTC1Q8IUR5 882 aa18.41■□□□□ 0.54
CNTNAP3B-214ENST00000618777 RGS22Q8NE09 1264 aa18.41■□□□□ 0.54
CNTNAP3B-214ENST00000618777 CBX8Q9HC52 389 aa18.41■□□□□ 0.54
CNTNAP3B-214ENST00000618777 DDX21Q9NR30 783 aaKnown RBP eCLIP18.41■□□□□ 0.54
CNTNAP3B-214ENST00000618777 ARL1P40616 181 aaPredicted RBP18.4■□□□□ 0.54
CNTNAP3B-214ENST00000618777 MAP3K21Q5TCX8 1036 aa18.4■□□□□ 0.54
CNTNAP3B-214ENST00000618777 CDK19Q9BWU1 502 aa18.4■□□□□ 0.54
CNTNAP3B-214ENST00000618777 FANCCQ00597 558 aa18.4■□□□□ 0.54
CNTNAP3B-214ENST00000618777 CLSTN2Q9H4D0 955 aa18.4■□□□□ 0.54
CNTNAP3B-214ENST00000618777 INF2Q27J81 1249 aa18.4■□□□□ 0.54
CNTNAP3B-214ENST00000618777 TSHZ3Q63HK5 1081 aa18.4■□□□□ 0.54
CNTNAP3B-214ENST00000618777 MFSD6Q6ZSS7 791 aa18.4■□□□□ 0.54
CNTNAP3B-214ENST00000618777 TMTC2Q8N394 836 aa18.4■□□□□ 0.54
CNTNAP3B-214ENST00000618777 TMEM110-MUSTN1A8MSY1 372 aa18.4■□□□□ 0.54
CNTNAP3B-214ENST00000618777 SEC24BO95487 1268 aa18.4■□□□□ 0.54
CNTNAP3B-214ENST00000618777 AK2P54819 239 aa18.4■□□□□ 0.54
CNTNAP3B-214ENST00000618777 CSRNP2Q9H175 543 aa18.4■□□□□ 0.54
CNTNAP3B-214ENST00000618777 PPANQ9NQ55 473 aaKnown RBP18.4■□□□□ 0.54
CNTNAP3B-214ENST00000618777 ANKRD20A3Q5VUR7 823 aa18.39■□□□□ 0.54
CNTNAP3B-214ENST00000618777 Q6ZUG5 572 aa18.39■□□□□ 0.54
CNTNAP3B-214ENST00000618777 ERMNQ8TAM6 284 aa18.39■□□□□ 0.54
CNTNAP3B-214ENST00000618777 OPHN1O60890 802 aa18.39■□□□□ 0.53
CNTNAP3B-214ENST00000618777 EEF2P13639 858 aaKnown RBP18.39■□□□□ 0.53
CNTNAP3B-214ENST00000618777 HAND2P61296 217 aa18.39■□□□□ 0.53
CNTNAP3B-214ENST00000618777 ATP2B3Q16720 1220 aa18.39■□□□□ 0.53
CNTNAP3B-214ENST00000618777 IL16Q14005 1332 aa18.39■□□□□ 0.53
CNTNAP3B-214ENST00000618777 ERICH3Q5RHP9 1530 aa18.39■□□□□ 0.53
CNTNAP3B-214ENST00000618777 TTC36A6NLP5 189 aa18.39■□□□□ 0.53
CNTNAP3B-214ENST00000618777 MGEA5O60502 916 aa18.39■□□□□ 0.53
CNTNAP3B-214ENST00000618777 SMARCA2P51531 1590 aa18.39■□□□□ 0.53
CNTNAP3B-214ENST00000618777 HGSO14964 777 aaPredicted RBP18.39■□□□□ 0.53
CNTNAP3B-214ENST00000618777 CLTAP09496 248 aa18.39■□□□□ 0.53
CNTNAP3B-214ENST00000618777 KLHDC4Q8TBB5 520 aa18.39■□□□□ 0.53
CNTNAP3B-214ENST00000618777 GAS2L3Q86XJ1 694 aa18.38■□□□□ 0.53
CNTNAP3B-214ENST00000618777 TCEANC2Q96MN5 208 aa18.38■□□□□ 0.53
CNTNAP3B-214ENST00000618777 FLIIQ13045 1269 aa18.38■□□□□ 0.53
CNTNAP3B-214ENST00000618777 HHATQ5VTY9 493 aa18.38■□□□□ 0.53
CNTNAP3B-214ENST00000618777 MCM10Q7L590 875 aa18.38■□□□□ 0.53
CNTNAP3B-214ENST00000618777 CASKIN1Q8WXD9 1431 aa18.38■□□□□ 0.53
CNTNAP3B-214ENST00000618777 Q9H521 79 aa18.38■□□□□ 0.53
CNTNAP3B-214ENST00000618777 SYNCQ9H7C4 482 aa18.38■□□□□ 0.53
CNTNAP3B-214ENST00000618777 TSKSQ9UJT2 592 aa18.38■□□□□ 0.53
CNTNAP3B-214ENST00000618777 KRT71Q3SY84 523 aa18.38■□□□□ 0.53
CNTNAP3B-214ENST00000618777 CCDC65Q8IXS2 484 aa18.38■□□□□ 0.53
CNTNAP3B-214ENST00000618777 EPSTI1Q96J88 318 aa18.38■□□□□ 0.53
CNTNAP3B-214ENST00000618777 PRR16Q569H4 304 aa18.37■□□□□ 0.53
CNTNAP3B-214ENST00000618777 RUFY3Q7L099 469 aa18.37■□□□□ 0.53
CNTNAP3B-214ENST00000618777 RHPN1Q8TCX5 695 aa18.37■□□□□ 0.53
CNTNAP3B-214ENST00000618777 CCDC14Q49A88 953 aa18.37■□□□□ 0.53
CNTNAP3B-214ENST00000618777 CAVIN4Q5BKX8 364 aa18.37■□□□□ 0.53
CNTNAP3B-214ENST00000618777 MIS18AQ9NYP9 233 aa18.37■□□□□ 0.53
CNTNAP3B-214ENST00000618777 KLHL14Q9P2G3 628 aa18.37■□□□□ 0.53
CNTNAP3B-214ENST00000618777 THEGQ9P2T0 379 aa18.37■□□□□ 0.53
CNTNAP3B-214ENST00000618777 FAM169AQ9Y6X4 670 aa18.37■□□□□ 0.53
CNTNAP3B-214ENST00000618777 TRHP20396 242 aaPredicted RBP18.37■□□□□ 0.53
CNTNAP3B-214ENST00000618777 PPP1R2P41236 205 aa18.37■□□□□ 0.53
CNTNAP3B-214ENST00000618777 NOX5Q96PH1 765 aa18.37■□□□□ 0.53
CNTNAP3B-214ENST00000618777 DDX41Q9UJV9 622 aaKnown RBP18.37■□□□□ 0.53
CNTNAP3B-214ENST00000618777 CCDC85AQ96PX6 553 aaPredicted RBP18.37■□□□□ 0.53
CNTNAP3B-214ENST00000618777 PDE11AQ9HCR9 933 aa18.37■□□□□ 0.53
CNTNAP3B-214ENST00000618777 PSMD2Q13200 908 aa18.36■□□□□ 0.53
CNTNAP3B-214ENST00000618777 WTAPQ15007 396 aa18.36■□□□□ 0.53
CNTNAP3B-214ENST00000618777 VWA3BQ502W6 1294 aa18.36■□□□□ 0.53
CNTNAP3B-214ENST00000618777 NBPF6Q5VWK0 638 aa18.36■□□□□ 0.53
CNTNAP3B-214ENST00000618777 NBPF5PQ86XG9 351 aaPredicted RBP18.36■□□□□ 0.53
CNTNAP3B-214ENST00000618777 CALR3Q96L12 384 aaKnown RBP18.36■□□□□ 0.53
CNTNAP3B-214ENST00000618777 NBPF4Q96M43 638 aa18.36■□□□□ 0.53
CNTNAP3B-214ENST00000618777 LMBRD1Q9NUN5 540 aa18.36■□□□□ 0.53
CNTNAP3B-214ENST00000618777 PSMD6Q15008 389 aa18.36■□□□□ 0.53
CNTNAP3B-214ENST00000618777 PPP1R42Q7Z4L9 355 aa18.36■□□□□ 0.53
CNTNAP3B-214ENST00000618777 TACC3Q9Y6A5 838 aa18.36■□□□□ 0.53
CNTNAP3B-214ENST00000618777 EIF3CLB5ME19 914 aaKnown RBP18.36■□□□□ 0.53
CNTNAP3B-214ENST00000618777 GJC1P36383 396 aa18.36■□□□□ 0.53
CNTNAP3B-214ENST00000618777 EIF3CQ99613 913 aaKnown RBP18.36■□□□□ 0.53
CNTNAP3B-214ENST00000618777 NCOA1Q15788 1441 aa18.36■□□□□ 0.53
CNTNAP3B-214ENST00000618777 ANKRD44Q8N8A2 993 aa18.36■□□□□ 0.53
CNTNAP3B-214ENST00000618777 IQUBQ8NA54 791 aa18.36■□□□□ 0.53
CNTNAP3B-214ENST00000618777 RBM5P52756 815 aaKnown RBP eCLIP18.36■□□□□ 0.53
CNTNAP3B-214ENST00000618777 FAM212AQ96EL1 285 aa18.36■□□□□ 0.53
CNTNAP3B-214ENST00000618777 KAT14Q9H8E8 782 aa18.36■□□□□ 0.53
CNTNAP3B-214ENST00000618777 DYNC1I2Q13409 638 aaKnown RBP18.35■□□□□ 0.53
CNTNAP3B-214ENST00000618777 SLMAPQ14BN4 828 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms