RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 MS4A1P11836 297 aa19.83■□□□□ 0.77
BRCA1-228ENST00000618469 BCAMP50895 628 aa19.83■□□□□ 0.77
BRCA1-228ENST00000618469 NBPF9Q3BBW0 867 aa19.83■□□□□ 0.77
BRCA1-228ENST00000618469 ZNF296Q8WUU4 475 aaPredicted RBP19.83■□□□□ 0.77
BRCA1-228ENST00000618469 PITPNM2Q9BZ72 1349 aa19.82■□□□□ 0.76
BRCA1-228ENST00000618469 COL1A1P02452 1464 aaPredicted RBP19.82■□□□□ 0.76
BRCA1-228ENST00000618469 WNT10BO00744 389 aa19.82■□□□□ 0.76
BRCA1-228ENST00000618469 ZBTB7BO15156 539 aaPredicted RBP19.82■□□□□ 0.76
BRCA1-228ENST00000618469 MMP14P50281 582 aa19.82■□□□□ 0.76
BRCA1-228ENST00000618469 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.82■□□□□ 0.76
BRCA1-228ENST00000618469 TTLL12Q14166 644 aaPredicted RBP19.8■□□□□ 0.76
BRCA1-228ENST00000618469 MVPQ14764 893 aaKnown RBP19.8■□□□□ 0.76
BRCA1-228ENST00000618469 DLGAP5Q15398 846 aa19.8■□□□□ 0.76
BRCA1-228ENST00000618469 TFCP2Q12800 502 aa19.79■□□□□ 0.76
BRCA1-228ENST00000618469 POLA2Q14181 598 aa19.79■□□□□ 0.76
BRCA1-228ENST00000618469 CFAP100Q494V2 611 aa19.79■□□□□ 0.76
BRCA1-228ENST00000618469 R3HDMLQ9H3Y0 253 aa19.79■□□□□ 0.76
BRCA1-228ENST00000618469 TTF2Q9UNY4 1162 aaKnown RBP19.79■□□□□ 0.76
BRCA1-228ENST00000618469 COG6Q9Y2V7 657 aa19.79■□□□□ 0.76
BRCA1-228ENST00000618469 PCDHAC2Q9Y5I4 1007 aa19.79■□□□□ 0.76
BRCA1-228ENST00000618469 PAPPA2Q9BXP8 1791 aa19.79■□□□□ 0.76
BRCA1-228ENST00000618469 ADORA1P30542 326 aa19.78■□□□□ 0.76
BRCA1-228ENST00000618469 G3BP1Q13283 466 aaKnown RBP eCLIP19.78■□□□□ 0.76
BRCA1-228ENST00000618469 PRKG1Q13976 671 aa19.78■□□□□ 0.76
BRCA1-228ENST00000618469 TBC1D22AQ8WUA7 517 aa19.78■□□□□ 0.76
BRCA1-228ENST00000618469 ZBED3Q96IU2 234 aaPredicted RBP19.78■□□□□ 0.76
BRCA1-228ENST00000618469 A0A1B0GUL7 405 aa19.77■□□□□ 0.76
BRCA1-228ENST00000618469 RBM5P52756 815 aaKnown RBP eCLIP19.77■□□□□ 0.76
BRCA1-228ENST00000618469 ATP8B2P98198 1209 aa19.77■□□□□ 0.76
BRCA1-228ENST00000618469 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.77■□□□□ 0.76
BRCA1-228ENST00000618469 SSH3Q8TE77 659 aa19.77■□□□□ 0.76
BRCA1-228ENST00000618469 SPDYE2BA6NHP3 402 aa19.76■□□□□ 0.75
BRCA1-228ENST00000618469 SPDYE6P0CI01 402 aa19.76■□□□□ 0.75
BRCA1-228ENST00000618469 PHKA1P46020 1223 aa19.76■□□□□ 0.75
BRCA1-228ENST00000618469 OS9Q13438 667 aaPredicted RBP19.76■□□□□ 0.75
BRCA1-228ENST00000618469 GRIK5Q16478 980 aa19.76■□□□□ 0.75
BRCA1-228ENST00000618469 CEP85Q6P2H3 762 aa19.76■□□□□ 0.75
BRCA1-228ENST00000618469 APOBEC3FQ8IUX4 373 aaKnown RBP19.76■□□□□ 0.75
BRCA1-228ENST00000618469 MTMR14Q8NCE2 650 aa19.76■□□□□ 0.75
BRCA1-228ENST00000618469 GNL3LQ9NVN8 582 aaKnown RBP19.76■□□□□ 0.75
BRCA1-228ENST00000618469 DDX19BQ9UMR2 479 aa19.76■□□□□ 0.75
BRCA1-228ENST00000618469 AKAP2Q9Y2D5 859 aa19.76■□□□□ 0.75
BRCA1-228ENST00000618469 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.76■□□□□ 0.75
BRCA1-228ENST00000618469 GPR25O00155 361 aa19.75■□□□□ 0.75
BRCA1-228ENST00000618469 MYO1BO43795 1136 aa19.75■□□□□ 0.75
BRCA1-228ENST00000618469 TIMM10P62072 90 aa19.75■□□□□ 0.75
BRCA1-228ENST00000618469 FZD1Q9UP38 647 aa19.75■□□□□ 0.75
BRCA1-228ENST00000618469 AOX1Q06278 1338 aa19.75■□□□□ 0.75
BRCA1-228ENST00000618469 CLRN2A0PK11 232 aa19.74■□□□□ 0.75
BRCA1-228ENST00000618469 SURF6O75683 361 aaKnown RBP19.74■□□□□ 0.75
BRCA1-228ENST00000618469 PKN2Q16513 984 aaKnown RBP19.74■□□□□ 0.75
BRCA1-228ENST00000618469 C20orf194Q5TEA3 1177 aa19.74■□□□□ 0.75
BRCA1-228ENST00000618469 CCDC102BQ68D86 513 aa19.74■□□□□ 0.75
BRCA1-228ENST00000618469 REM2Q8IYK8 340 aaPredicted RBP19.74■□□□□ 0.75
BRCA1-228ENST00000618469 SERPINA10Q9UK55 444 aa19.74■□□□□ 0.75
BRCA1-228ENST00000618469 CRKP46108 304 aa19.73■□□□□ 0.75
BRCA1-228ENST00000618469 FKBP1BP68106 108 aa19.73■□□□□ 0.75
BRCA1-228ENST00000618469 WDR66Q8TBY9 1149 aa19.73■□□□□ 0.75
BRCA1-228ENST00000618469 XAGE2Q96GT9 111 aa19.73■□□□□ 0.75
BRCA1-228ENST00000618469 PRMT6Q96LA8 375 aaPredicted RBP19.73■□□□□ 0.75
BRCA1-228ENST00000618469 NEUROD6Q96NK8 337 aa19.73■□□□□ 0.75
BRCA1-228ENST00000618469 VEZTQ9HBM0 779 aa19.73■□□□□ 0.75
BRCA1-228ENST00000618469 MAST3O60307 1309 aa19.73■□□□□ 0.75
BRCA1-228ENST00000618469 SEMA3EO15041 775 aa19.72■□□□□ 0.75
BRCA1-228ENST00000618469 FBXO46Q6PJ61 603 aaPredicted RBP19.72■□□□□ 0.75
BRCA1-228ENST00000618469 DENND2AQ9ULE3 1009 aa19.72■□□□□ 0.75
BRCA1-228ENST00000618469 TM4SF4P48230 202 aa19.71■□□□□ 0.75
BRCA1-228ENST00000618469 RASGRF1Q13972 1273 aa19.71■□□□□ 0.75
BRCA1-228ENST00000618469 PDE3AQ14432 1141 aa19.71■□□□□ 0.75
BRCA1-228ENST00000618469 TEKT1Q969V4 418 aa19.71■□□□□ 0.75
BRCA1-228ENST00000618469 SUGT1Q9Y2Z0 365 aa19.71■□□□□ 0.75
BRCA1-228ENST00000618469 FKTNO75072 461 aa19.7■□□□□ 0.74
BRCA1-228ENST00000618469 GORABQ5T7V8 394 aa19.7■□□□□ 0.74
BRCA1-228ENST00000618469 CHMP4BQ9H444 224 aaKnown RBP19.7■□□□□ 0.74
BRCA1-228ENST00000618469 ZBTB40Q9NUA8 1239 aa19.7■□□□□ 0.74
BRCA1-228ENST00000618469 POTEFA5A3E0 1075 aa19.69■□□□□ 0.74
BRCA1-228ENST00000618469 PRDX5P30044 214 aa19.69■□□□□ 0.74
BRCA1-228ENST00000618469 NF2P35240 595 aa19.69■□□□□ 0.74
BRCA1-228ENST00000618469 HDLBPQ00341 1268 aaKnown RBP19.69■□□□□ 0.74
BRCA1-228ENST00000618469 SPDYE2Q495Y8 402 aa19.69■□□□□ 0.74
BRCA1-228ENST00000618469 TNNI3KQ59H18 835 aa19.69■□□□□ 0.74
BRCA1-228ENST00000618469 DEFB129Q9H1M3 183 aa19.69■□□□□ 0.74
BRCA1-228ENST00000618469 TDRD3Q9H7E2 651 aaKnown RBP19.69■□□□□ 0.74
BRCA1-228ENST00000618469 NOP58Q9Y2X3 529 aaKnown RBP19.69■□□□□ 0.74
BRCA1-228ENST00000618469 FPGT-TNNI3KV9GXZ4 949 aa19.69■□□□□ 0.74
BRCA1-228ENST00000618469 ZNF70Q9UC06 446 aaPredicted RBP19.68■□□□□ 0.74
BRCA1-228ENST00000618469 EXOC6BQ9Y2D4 811 aa19.68■□□□□ 0.74
BRCA1-228ENST00000618469 SSC5DA1L4H1 1573 aa19.68■□□□□ 0.74
BRCA1-228ENST00000618469 PDS5AQ29RF7 1337 aaKnown RBP19.68■□□□□ 0.74
BRCA1-228ENST00000618469 SALL1Q9NSC2 1324 aa19.68■□□□□ 0.74
BRCA1-228ENST00000618469 LDHBP07195 334 aaKnown RBP19.67■□□□□ 0.74
BRCA1-228ENST00000618469 HABP4Q5JVS0 413 aaKnown RBP19.67■□□□□ 0.74
BRCA1-228ENST00000618469 GPR108Q9NPR9 543 aa19.67■□□□□ 0.74
BRCA1-228ENST00000618469 PPP2R3BQ9Y5P8 575 aa19.67■□□□□ 0.74
BRCA1-228ENST00000618469 MAST2Q6P0Q8 1798 aa19.67■□□□□ 0.74
BRCA1-228ENST00000618469 MKI67P46013 3256 aaKnown RBP19.66■□□□□ 0.74
BRCA1-228ENST00000618469 ZBTB22O15209 634 aa19.66■□□□□ 0.74
BRCA1-228ENST00000618469 HMMRO75330 724 aa19.66■□□□□ 0.74
BRCA1-228ENST00000618469 TNFAIP1Q13829 316 aa19.66■□□□□ 0.74
BRCA1-228ENST00000618469 DIXDC1Q155Q3 683 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms