RNA–Protein interactions for RNA: ENST00000618449.4

CPEB1-216, Transcript of cytoplasmic polyadenylation element binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene CPEB1, Length 2,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB1-216ENST00000618449 CHAMP1Q96JM3 812 aa13.35□□□□□ -0.27
CPEB1-216ENST00000618449 ALDH8A1Q9H2A2 487 aaPredicted RBP13.35□□□□□ -0.27
CPEB1-216ENST00000618449 NSFL1CQ9UNZ2 370 aaKnown RBP13.35□□□□□ -0.27
CPEB1-216ENST00000618449 MBD4O95243 580 aa13.35□□□□□ -0.27
CPEB1-216ENST00000618449 NCLP19338 710 aaKnown RBP13.35□□□□□ -0.27
CPEB1-216ENST00000618449 HAND2P61296 217 aa13.35□□□□□ -0.27
CPEB1-216ENST00000618449 TOB2Q14106 344 aaPredicted RBP13.35□□□□□ -0.27
CPEB1-216ENST00000618449 CAVIN1Q6NZI2 390 aaKnown RBP13.35□□□□□ -0.27
CPEB1-216ENST00000618449 RAI14Q9P0K7 980 aa13.35□□□□□ -0.27
CPEB1-216ENST00000618449 TPCN1Q9ULQ1 816 aa13.35□□□□□ -0.27
CPEB1-216ENST00000618449 ME3Q16798 604 aa13.34□□□□□ -0.27
CPEB1-216ENST00000618449 IMMTQ16891 758 aaKnown RBP13.34□□□□□ -0.27
CPEB1-216ENST00000618449 ADGRA1Q86SQ6 560 aa13.34□□□□□ -0.27
CPEB1-216ENST00000618449 ZSCAN31Q96LW9 406 aaPredicted RBP13.34□□□□□ -0.27
CPEB1-216ENST00000618449 GPR101Q96P66 508 aaPredicted RBP13.34□□□□□ -0.27
CPEB1-216ENST00000618449 ARMT1Q9H993 441 aa13.34□□□□□ -0.27
CPEB1-216ENST00000618449 WDR33Q9C0J8 1336 aaKnown RBP13.34□□□□□ -0.27
CPEB1-216ENST00000618449 APPP05067 770 aa13.34□□□□□ -0.27
CPEB1-216ENST00000618449 SRGNP10124 158 aa13.34□□□□□ -0.27
CPEB1-216ENST00000618449 ANKRD1Q15327 319 aa13.34□□□□□ -0.27
CPEB1-216ENST00000618449 GPT2Q8TD30 523 aa13.34□□□□□ -0.27
CPEB1-216ENST00000618449 STK32BQ9NY57 414 aa13.34□□□□□ -0.27
CPEB1-216ENST00000618449 PDS5AQ29RF7 1337 aaKnown RBP13.33□□□□□ -0.27
CPEB1-216ENST00000618449 HMGB1P09429 215 aaKnown RBP13.33□□□□□ -0.28
CPEB1-216ENST00000618449 CYP7A1P22680 504 aa13.33□□□□□ -0.28
CPEB1-216ENST00000618449 LCORLQ8N3X6 602 aa13.33□□□□□ -0.28
CPEB1-216ENST00000618449 MIGA1Q8NAN2 632 aa13.33□□□□□ -0.28
CPEB1-216ENST00000618449 SH2B1Q9NRF2 756 aaPredicted RBP13.33□□□□□ -0.28
CPEB1-216ENST00000618449 LAMA4Q16363 1823 aa13.33□□□□□ -0.28
CPEB1-216ENST00000618449 ZNF213O14771 459 aa13.33□□□□□ -0.28
CPEB1-216ENST00000618449 UFL1O94874 794 aa13.33□□□□□ -0.28
CPEB1-216ENST00000618449 ZNF445P59923 1031 aa13.33□□□□□ -0.28
CPEB1-216ENST00000618449 CHAF1AQ13111 956 aaPredicted RBP13.33□□□□□ -0.28
CPEB1-216ENST00000618449 Q6ZUG5 572 aa13.33□□□□□ -0.28
CPEB1-216ENST00000618449 DHX32Q7L7V1 743 aaKnown RBP13.33□□□□□ -0.28
CPEB1-216ENST00000618449 DEFB132Q7Z7B7 95 aa13.33□□□□□ -0.28
CPEB1-216ENST00000618449 JAG2Q9Y219 1238 aa13.33□□□□□ -0.28
CPEB1-216ENST00000618449 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.33□□□□□ -0.28
CPEB1-216ENST00000618449 PATL2C9JE40 543 aaKnown RBP13.32□□□□□ -0.28
CPEB1-216ENST00000618449 ST3GAL1Q11201 340 aa13.32□□□□□ -0.28
CPEB1-216ENST00000618449 CCDC83Q8IWF9 413 aa13.32□□□□□ -0.28
CPEB1-216ENST00000618449 ZNF384Q8TF68 577 aa13.32□□□□□ -0.28
CPEB1-216ENST00000618449 LRRC2Q9BYS8 371 aa13.32□□□□□ -0.28
CPEB1-216ENST00000618449 GGA1Q9UJY5 639 aa13.32□□□□□ -0.28
CPEB1-216ENST00000618449 MYH13Q9UKX3 1938 aa13.32□□□□□ -0.28
CPEB1-216ENST00000618449 CACNA1SQ13698 1873 aa13.32□□□□□ -0.28
CPEB1-216ENST00000618449 PPEF1O14829 653 aaPredicted RBP13.32□□□□□ -0.28
CPEB1-216ENST00000618449 PRKAB2O43741 272 aa13.32□□□□□ -0.28
CPEB1-216ENST00000618449 ATP2B4P23634 1241 aa13.32□□□□□ -0.28
CPEB1-216ENST00000618449 PDE6BP35913 854 aa13.32□□□□□ -0.28
CPEB1-216ENST00000618449 EXOSC10Q01780 885 aaKnown RBP13.32□□□□□ -0.28
CPEB1-216ENST00000618449 SF3B2Q13435 895 aaKnown RBP13.32□□□□□ -0.28
CPEB1-216ENST00000618449 ZSCAN23Q3MJ62 389 aa13.32□□□□□ -0.28
CPEB1-216ENST00000618449 C15orf52Q6ZUT6 534 aaKnown RBP13.32□□□□□ -0.28
CPEB1-216ENST00000618449 NECAB1Q8N987 351 aa13.32□□□□□ -0.28
CPEB1-216ENST00000618449 EPB41L4AQ9HCS5 686 aaPredicted RBP13.32□□□□□ -0.28
CPEB1-216ENST00000618449 PODXL2Q9NZ53 605 aa13.32□□□□□ -0.28
CPEB1-216ENST00000618449 ZBTB22O15209 634 aa13.31□□□□□ -0.28
CPEB1-216ENST00000618449 MBD3O95983 291 aa13.31□□□□□ -0.28
CPEB1-216ENST00000618449 NPR1P16066 1061 aa13.31□□□□□ -0.28
CPEB1-216ENST00000618449 BAG6P46379 1132 aa13.31□□□□□ -0.28
CPEB1-216ENST00000618449 IFNL3Q8IZI9 196 aa13.31□□□□□ -0.28
CPEB1-216ENST00000618449 NBPF3Q9H094 633 aa13.31□□□□□ -0.28
CPEB1-216ENST00000618449 POLLQ9UGP5 575 aa13.31□□□□□ -0.28
CPEB1-216ENST00000618449 SMC3Q9UQE7 1217 aa13.31□□□□□ -0.28
CPEB1-216ENST00000618449 GSG1L2A8MUP6 293 aa13.31□□□□□ -0.28
CPEB1-216ENST00000618449 PRDX5P30044 214 aa13.31□□□□□ -0.28
CPEB1-216ENST00000618449 ALX1Q15699 326 aa13.31□□□□□ -0.28
CPEB1-216ENST00000618449 NAA16Q6N069 864 aaPredicted RBP13.31□□□□□ -0.28
CPEB1-216ENST00000618449 CHST3Q7LGC8 479 aa13.31□□□□□ -0.28
CPEB1-216ENST00000618449 TMC4Q7Z404 712 aa13.31□□□□□ -0.28
CPEB1-216ENST00000618449 ZNF804AQ7Z570 1209 aa13.31□□□□□ -0.28
CPEB1-216ENST00000618449 SP8Q8IXZ3 490 aa13.31□□□□□ -0.28
CPEB1-216ENST00000618449 TDRD7Q8NHU6 1098 aaKnown RBP13.31□□□□□ -0.28
CPEB1-216ENST00000618449 TBC1D16Q8TBP0 767 aa13.31□□□□□ -0.28
CPEB1-216ENST00000618449 NSUN4Q96CB9 384 aaKnown RBP13.31□□□□□ -0.28
CPEB1-216ENST00000618449 RBM27Q9P2N5 1060 aaKnown RBP13.31□□□□□ -0.28
CPEB1-216ENST00000618449 SLC4A4Q9Y6R1 1079 aa13.31□□□□□ -0.28
CPEB1-216ENST00000618449 GNAT2P19087 354 aa13.3□□□□□ -0.28
CPEB1-216ENST00000618449 MECOMQ03112 1051 aa13.3□□□□□ -0.28
CPEB1-216ENST00000618449 BRF1Q92994 677 aa13.3□□□□□ -0.28
CPEB1-216ENST00000618449 ATP6V0A2Q9Y487 856 aa13.3□□□□□ -0.28
CPEB1-216ENST00000618449 LRRC37AA6NMS7 1700 aa13.3□□□□□ -0.28
CPEB1-216ENST00000618449 COL11A2P13942 1736 aaPredicted RBP13.3□□□□□ -0.28
CPEB1-216ENST00000618449 MAGEB6P1A0A0J9YX57 407 aa13.3□□□□□ -0.28
CPEB1-216ENST00000618449 DTNBO60941 627 aa13.3□□□□□ -0.28
CPEB1-216ENST00000618449 FGD1P98174 961 aa13.3□□□□□ -0.28
CPEB1-216ENST00000618449 MASTLQ96GX5 879 aa13.3□□□□□ -0.28
CPEB1-216ENST00000618449 RIOK1Q9BRS2 568 aaKnown RBP13.3□□□□□ -0.28
CPEB1-216ENST00000618449 PDGFDQ9GZP0 370 aaPredicted RBP13.3□□□□□ -0.28
CPEB1-216ENST00000618449 NAPBQ9H115 298 aa13.3□□□□□ -0.28
CPEB1-216ENST00000618449 ZMYM6O95789 1325 aa13.3□□□□□ -0.28
CPEB1-216ENST00000618449 ZSCAN22P10073 491 aaPredicted RBP13.29□□□□□ -0.28
CPEB1-216ENST00000618449 ALDH1B1P30837 517 aa13.29□□□□□ -0.28
CPEB1-216ENST00000618449 OLFM4Q6UX06 510 aa13.29□□□□□ -0.28
CPEB1-216ENST00000618449 TBC1D10CQ8IV04 446 aa13.29□□□□□ -0.28
CPEB1-216ENST00000618449 AGXT2Q9BYV1 514 aa13.29□□□□□ -0.28
CPEB1-216ENST00000618449 CD209Q9NNX6 404 aa13.29□□□□□ -0.28
CPEB1-216ENST00000618449 C6orf229H3BNL8 230 aa13.29□□□□□ -0.28
CPEB1-216ENST00000618449 STX6O43752 255 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms