RNA–Protein interactions for RNA: ENST00000618217.4

CBWD3-213, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-213ENST00000618217 IGSF3O75054 1194 aa27.53■■■□□ 2
CBWD3-213ENST00000618217 GSPT1P15170 499 aaKnown RBP27.53■■■□□ 2
CBWD3-213ENST00000618217 RGS3P49796 1198 aa27.53■■■□□ 2
CBWD3-213ENST00000618217 MMP14P50281 582 aa27.53■■■□□ 2
CBWD3-213ENST00000618217 MICALL2Q8IY33 904 aa27.53■■■□□ 2
CBWD3-213ENST00000618217 MRIQ9BWK5 157 aa27.53■■■□□ 2
CBWD3-213ENST00000618217 MYH2Q9UKX2 1941 aa27.53■■■□□ 2
CBWD3-213ENST00000618217 EPS15P42566 896 aa27.52■■■□□ 2
CBWD3-213ENST00000618217 MECOMQ03112 1051 aa27.52■■■□□ 2
CBWD3-213ENST00000618217 KBTBD3Q8NAB2 608 aa27.52■■■□□ 2
CBWD3-213ENST00000618217 NSUN4Q96CB9 384 aaKnown RBP27.52■■■□□ 2
CBWD3-213ENST00000618217 MAST2Q6P0Q8 1798 aa27.51■■■□□ 2
CBWD3-213ENST00000618217 ADAMTSL1Q8N6G6 1762 aa27.51■■■□□ 2
CBWD3-213ENST00000618217 IDH1O75874 414 aaKnown RBP27.51■■□□□ 1.99
CBWD3-213ENST00000618217 HDLBPQ00341 1268 aaKnown RBP27.51■■□□□ 1.99
CBWD3-213ENST00000618217 OGFOD1Q8N543 542 aa27.51■■□□□ 1.99
CBWD3-213ENST00000618217 EVI5LQ96CN4 794 aa27.51■■□□□ 1.99
CBWD3-213ENST00000618217 RAI14Q9P0K7 980 aa27.51■■□□□ 1.99
CBWD3-213ENST00000618217 AK9Q5TCS8 1911 aa27.51■■□□□ 1.99
CBWD3-213ENST00000618217 MAST3O60307 1309 aa27.5■■□□□ 1.99
CBWD3-213ENST00000618217 MAP3K12Q12852 859 aa27.49■■□□□ 1.99
CBWD3-213ENST00000618217 DIXDC1Q155Q3 683 aa27.49■■□□□ 1.99
CBWD3-213ENST00000618217 DZIP1Q86YF9 867 aaKnown RBP27.49■■□□□ 1.99
CBWD3-213ENST00000618217 FAM163AQ96GL9 167 aaPredicted RBP27.49■■□□□ 1.99
CBWD3-213ENST00000618217 SERPINA10Q9UK55 444 aa27.49■■□□□ 1.99
CBWD3-213ENST00000618217 EGFRP00533 1210 aa27.49■■□□□ 1.99
CBWD3-213ENST00000618217 HHIPL2Q6UWX4 724 aa27.49■■□□□ 1.99
CBWD3-213ENST00000618217 HACL1Q9UJ83 578 aa27.49■■□□□ 1.99
CBWD3-213ENST00000618217 HDAC9Q9UKV0 1011 aa27.49■■□□□ 1.99
CBWD3-213ENST00000618217 H7C1D1 291 aa27.48■■□□□ 1.99
CBWD3-213ENST00000618217 LMOD1P29536 600 aaPredicted RBP27.48■■□□□ 1.99
CBWD3-213ENST00000618217 MTMR14Q8NCE2 650 aa27.48■■□□□ 1.99
CBWD3-213ENST00000618217 ZBED3Q96IU2 234 aaPredicted RBP27.48■■□□□ 1.99
CBWD3-213ENST00000618217 MYOZ2Q9NPC6 264 aa27.48■■□□□ 1.99
CBWD3-213ENST00000618217 PDE6AP16499 860 aa27.47■■□□□ 1.99
CBWD3-213ENST00000618217 CRKP46108 304 aa27.47■■□□□ 1.99
CBWD3-213ENST00000618217 SLC9C2Q5TAH2 1124 aa27.47■■□□□ 1.99
CBWD3-213ENST00000618217 SAMD7Q7Z3H4 446 aa27.47■■□□□ 1.99
CBWD3-213ENST00000618217 PCDHAC2Q9Y5I4 1007 aa27.47■■□□□ 1.99
CBWD3-213ENST00000618217 TCRBV5S4A2TA0A5A2 114 aa27.46■■□□□ 1.99
CBWD3-213ENST00000618217 IQCA1LA6NCM1 817 aa27.46■■□□□ 1.99
CBWD3-213ENST00000618217 TRIM6-TRIM34B2RNG4 842 aa27.46■■□□□ 1.99
CBWD3-213ENST00000618217 CHGBP05060 677 aa27.46■■□□□ 1.99
CBWD3-213ENST00000618217 SDSP20132 328 aa27.46■■□□□ 1.99
CBWD3-213ENST00000618217 TMED8Q6PL24 325 aaPredicted RBP27.46■■□□□ 1.99
CBWD3-213ENST00000618217 ZNF526Q8TF50 670 aaPredicted RBP27.46■■□□□ 1.99
CBWD3-213ENST00000618217 TEKT1Q969V4 418 aa27.46■■□□□ 1.99
CBWD3-213ENST00000618217 TAF1DQ9H5J8 278 aaPredicted RBP27.46■■□□□ 1.99
CBWD3-213ENST00000618217 RRAGCQ9HB90 399 aa27.46■■□□□ 1.99
CBWD3-213ENST00000618217 NMRK2Q9NPI5 230 aa27.46■■□□□ 1.99
CBWD3-213ENST00000618217 ADARB2Q9NS39 739 aaKnown RBP27.46■■□□□ 1.99
CBWD3-213ENST00000618217 GAKO14976 1311 aa27.46■■□□□ 1.99
CBWD3-213ENST00000618217 CFAP100Q494V2 611 aa27.45■■□□□ 1.99
CBWD3-213ENST00000618217 NAA16Q6N069 864 aaPredicted RBP27.45■■□□□ 1.99
CBWD3-213ENST00000618217 ADGRA1Q86SQ6 560 aa27.45■■□□□ 1.99
CBWD3-213ENST00000618217 CNTROBQ8N137 903 aa27.45■■□□□ 1.99
CBWD3-213ENST00000618217 MAGEB6Q8N7X4 407 aa27.45■■□□□ 1.99
CBWD3-213ENST00000618217 ZDHHC15Q96MV8 337 aa27.45■■□□□ 1.99
CBWD3-213ENST00000618217 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.45■■□□□ 1.99
CBWD3-213ENST00000618217 DAGLAQ9Y4D2 1042 aa27.45■■□□□ 1.99
CBWD3-213ENST00000618217 VEGFAP15692 232 aaPredicted RBP27.45■■□□□ 1.98
CBWD3-213ENST00000618217 YY1P25490 414 aa27.45■■□□□ 1.98
CBWD3-213ENST00000618217 EPHX2P34913 555 aa27.45■■□□□ 1.98
CBWD3-213ENST00000618217 ADD2P35612 726 aa27.45■■□□□ 1.98
CBWD3-213ENST00000618217 GSTO1P78417 241 aa27.45■■□□□ 1.98
CBWD3-213ENST00000618217 BMP2KLQ5H9B9 411 aa27.45■■□□□ 1.98
CBWD3-213ENST00000618217 TICAM2Q86XR7 235 aa27.45■■□□□ 1.98
CBWD3-213ENST00000618217 TRPM4Q8TD43 1214 aa27.45■■□□□ 1.98
CBWD3-213ENST00000618217 RILPL2Q969X0 211 aa27.45■■□□□ 1.98
CBWD3-213ENST00000618217 HIRAP54198 1017 aaPredicted RBP27.44■■□□□ 1.98
CBWD3-213ENST00000618217 SLFNL1Q499Z3 407 aa27.44■■□□□ 1.98
CBWD3-213ENST00000618217 TBC1D10BQ4KMP7 808 aaPredicted RBP27.44■■□□□ 1.98
CBWD3-213ENST00000618217 SLF2Q8IX21 1173 aa27.44■■□□□ 1.98
CBWD3-213ENST00000618217 FSD1Q9BTV5 496 aa27.44■■□□□ 1.98
CBWD3-213ENST00000618217 MROH7-TTC4A0A0A0MT08 1334 aa27.44■■□□□ 1.98
CBWD3-213ENST00000618217 LDHCP07864 332 aa27.43■■□□□ 1.98
CBWD3-213ENST00000618217 UBE3CQ15386 1083 aa27.43■■□□□ 1.98
CBWD3-213ENST00000618217 APOBEC3HQ6NTF7 200 aaKnown RBP27.43■■□□□ 1.98
CBWD3-213ENST00000618217 PRMT6Q96LA8 375 aaPredicted RBP27.43■■□□□ 1.98
CBWD3-213ENST00000618217 SPDYE2BA6NHP3 402 aa27.42■■□□□ 1.98
CBWD3-213ENST00000618217 WNT10BO00744 389 aa27.42■■□□□ 1.98
CBWD3-213ENST00000618217 SPDYE6P0CI01 402 aa27.42■■□□□ 1.98
CBWD3-213ENST00000618217 CYP7A1P22680 504 aa27.42■■□□□ 1.98
CBWD3-213ENST00000618217 DLGAP5Q15398 846 aa27.42■■□□□ 1.98
CBWD3-213ENST00000618217 KIF4BQ2VIQ3 1234 aa27.42■■□□□ 1.98
CBWD3-213ENST00000618217 RBM26Q5T8P6 1007 aaKnown RBP27.42■■□□□ 1.98
CBWD3-213ENST00000618217 ZNF532Q9HCE3 1301 aa27.42■■□□□ 1.98
CBWD3-213ENST00000618217 GPR75-ASB3A0A0A6YYF3 556 aa27.41■■□□□ 1.98
CBWD3-213ENST00000618217 RNF113AO15541 343 aaKnown RBP27.41■■□□□ 1.98
CBWD3-213ENST00000618217 ZSCAN25Q6NSZ9 544 aa27.41■■□□□ 1.98
CBWD3-213ENST00000618217 RFX7Q2KHR2 1363 aa27.41■■□□□ 1.98
CBWD3-213ENST00000618217 ECM29Q5VYK3 1845 aa27.41■■□□□ 1.98
CBWD3-213ENST00000618217 ZFYP08048 801 aaPredicted RBP27.41■■□□□ 1.98
CBWD3-213ENST00000618217 NBPF9Q3BBW0 867 aa27.41■■□□□ 1.98
CBWD3-213ENST00000618217 USP50Q70EL3 339 aaPredicted RBP27.41■■□□□ 1.98
CBWD3-213ENST00000618217 RBM5P52756 815 aaKnown RBP eCLIP27.4■■□□□ 1.98
CBWD3-213ENST00000618217 PPP4CP60510 307 aa27.38■■□□□ 1.97
CBWD3-213ENST00000618217 LRRFIP1Q32MZ4 808 aaKnown RBP27.38■■□□□ 1.97
CBWD3-213ENST00000618217 GPBP1L1Q9HC44 474 aaPredicted RBP27.38■■□□□ 1.97
CBWD3-213ENST00000618217 PNMA8AQ86V59 439 aaPredicted RBP27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms