RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 COL4A1P02462 1669 aa14.58□□□□□ -0.08
CIITA-212ENST00000618207 CELF1Q92879 486 aaKnown RBP14.58□□□□□ -0.08
CIITA-212ENST00000618207 CPLX1O14810 134 aa14.57□□□□□ -0.08
CIITA-212ENST00000618207 RESTQ13127 1097 aa14.57□□□□□ -0.08
CIITA-212ENST00000618207 CYB5R4Q7L1T6 521 aa14.57□□□□□ -0.08
CIITA-212ENST00000618207 VPS37DQ86XT2 251 aa14.57□□□□□ -0.08
CIITA-212ENST00000618207 ANKRD18AQ8IVF6 992 aa14.57□□□□□ -0.08
CIITA-212ENST00000618207 MB21D2Q8IYB1 491 aaPredicted RBP14.57□□□□□ -0.08
CIITA-212ENST00000618207 SMARCC2Q8TAQ2 1214 aa14.57□□□□□ -0.08
CIITA-212ENST00000618207 DACT1Q9NYF0 836 aa14.57□□□□□ -0.08
CIITA-212ENST00000618207 STRBPQ96SI9 672 aaKnown RBP14.57□□□□□ -0.08
CIITA-212ENST00000618207 ZKSCAN3Q9BRR0 538 aa14.57□□□□□ -0.08
CIITA-212ENST00000618207 AGXT2Q9BYV1 514 aa14.57□□□□□ -0.08
CIITA-212ENST00000618207 NAPBQ9H115 298 aa14.57□□□□□ -0.08
CIITA-212ENST00000618207 TCRBV5S4A2TA0A5A2 114 aa14.56□□□□□ -0.08
CIITA-212ENST00000618207 POLR3DP05423 398 aaPredicted RBP14.56□□□□□ -0.08
CIITA-212ENST00000618207 UBE3CQ15386 1083 aa14.56□□□□□ -0.08
CIITA-212ENST00000618207 SLC51AQ86UW1 340 aa14.56□□□□□ -0.08
CIITA-212ENST00000618207 MICU3Q86XE3 530 aa14.56□□□□□ -0.08
CIITA-212ENST00000618207 PPP1R9BQ96SB3 815 aa14.56□□□□□ -0.08
CIITA-212ENST00000618207 CDC5LQ99459 802 aaKnown RBP14.56□□□□□ -0.08
CIITA-212ENST00000618207 USP25Q9UHP3 1055 aa14.56□□□□□ -0.08
CIITA-212ENST00000618207 GOLGB1Q14789 3259 aaKnown RBP14.56□□□□□ -0.08
CIITA-212ENST00000618207 FDPSP14324 419 aaKnown RBP14.56□□□□□ -0.08
CIITA-212ENST00000618207 MEX3CQ5U5Q3 659 aaKnown RBP14.56□□□□□ -0.08
CIITA-212ENST00000618207 LCORLQ8N3X6 602 aa14.56□□□□□ -0.08
CIITA-212ENST00000618207 PGBD1Q96JS3 809 aa14.56□□□□□ -0.08
CIITA-212ENST00000618207 SCAND2PQ9GZW5 306 aaPredicted RBP14.56□□□□□ -0.08
CIITA-212ENST00000618207 RAI14Q9P0K7 980 aa14.56□□□□□ -0.08
CIITA-212ENST00000618207 CCNL1Q9UK58 526 aaPredicted RBP14.56□□□□□ -0.08
CIITA-212ENST00000618207 BCL9LQ86UU0 1499 aa14.56□□□□□ -0.08
CIITA-212ENST00000618207 ADD1P35611 737 aaKnown RBP14.56□□□□□ -0.08
CIITA-212ENST00000618207 TDO2P48775 406 aa14.56□□□□□ -0.08
CIITA-212ENST00000618207 VPS72Q15906 364 aa14.56□□□□□ -0.08
CIITA-212ENST00000618207 NBPF5PQ86XG9 351 aaPredicted RBP14.56□□□□□ -0.08
CIITA-212ENST00000618207 ZNF274Q96GC6 653 aaPredicted RBP14.56□□□□□ -0.08
CIITA-212ENST00000618207 EPB41L4AQ9HCS5 686 aaPredicted RBP14.56□□□□□ -0.08
CIITA-212ENST00000618207 NEDD4P46934 1319 aa14.55□□□□□ -0.08
CIITA-212ENST00000618207 SMIM22K7EJ46 135 aa14.55□□□□□ -0.08
CIITA-212ENST00000618207 ZPR1O75312 459 aa14.55□□□□□ -0.08
CIITA-212ENST00000618207 KLRK1P26718 216 aa14.55□□□□□ -0.08
CIITA-212ENST00000618207 HMGN5P82970 282 aaKnown RBP14.55□□□□□ -0.08
CIITA-212ENST00000618207 NFXL1Q6ZNB6 911 aa14.55□□□□□ -0.08
CIITA-212ENST00000618207 IFNL3Q8IZI9 196 aa14.55□□□□□ -0.08
CIITA-212ENST00000618207 SDR42E1Q8WUS8 393 aa14.55□□□□□ -0.08
CIITA-212ENST00000618207 ZNF512BQ96KM6 892 aaPredicted RBP14.55□□□□□ -0.08
CIITA-212ENST00000618207 AK7Q96M32 723 aa14.55□□□□□ -0.08
CIITA-212ENST00000618207 AIFM3Q96NN9 605 aa14.55□□□□□ -0.08
CIITA-212ENST00000618207 BCL2L12Q9HB09 334 aa14.55□□□□□ -0.08
CIITA-212ENST00000618207 ORC3Q9UBD5 711 aaPredicted RBP14.55□□□□□ -0.08
CIITA-212ENST00000618207 SLC4A4Q9Y6R1 1079 aa14.55□□□□□ -0.08
CIITA-212ENST00000618207 ABCC12Q96J65 1359 aa14.55□□□□□ -0.08
CIITA-212ENST00000618207 NR1I2O75469 434 aa14.55□□□□□ -0.08
CIITA-212ENST00000618207 CCDC82Q8N4S0 544 aa14.55□□□□□ -0.08
CIITA-212ENST00000618207 SETDB2Q96T68 719 aa14.55□□□□□ -0.08
CIITA-212ENST00000618207 LLPHQ9BRT6 129 aaKnown RBP14.55□□□□□ -0.08
CIITA-212ENST00000618207 CARMIL3Q8ND23 1372 aa14.54□□□□□ -0.08
CIITA-212ENST00000618207 PTMAP06454 111 aaKnown RBP14.54□□□□□ -0.08
CIITA-212ENST00000618207 CYP7A1P22680 504 aa14.54□□□□□ -0.08
CIITA-212ENST00000618207 USP28Q96RU2 1077 aa14.54□□□□□ -0.08
CIITA-212ENST00000618207 TFCP2L1Q9NZI6 479 aa14.54□□□□□ -0.08
CIITA-212ENST00000618207 HPS5Q9UPZ3 1129 aa14.54□□□□□ -0.08
CIITA-212ENST00000618207 DDX60Q8IY21 1712 aaKnown RBP14.54□□□□□ -0.08
CIITA-212ENST00000618207 MINDY4BA8MYZ0 360 aa14.54□□□□□ -0.08
CIITA-212ENST00000618207 ADGRA1Q86SQ6 560 aa14.54□□□□□ -0.08
CIITA-212ENST00000618207 PHKBQ93100 1093 aa14.54□□□□□ -0.08
CIITA-212ENST00000618207 NUP62CLQ9H1M0 184 aa14.54□□□□□ -0.08
CIITA-212ENST00000618207 UBE2Q2LH0YL09 131 aa14.53□□□□□ -0.08
CIITA-212ENST00000618207 SLC4A8Q2Y0W8 1093 aa14.53□□□□□ -0.08
CIITA-212ENST00000618207 CLEC4GQ6UXB4 293 aa14.53□□□□□ -0.08
CIITA-212ENST00000618207 C8orf76Q96K31 380 aa14.53□□□□□ -0.08
CIITA-212ENST00000618207 TNMDQ9H2S6 317 aa14.53□□□□□ -0.08
CIITA-212ENST00000618207 MINPP1Q9UNW1 487 aa14.53□□□□□ -0.08
CIITA-212ENST00000618207 KIF3AQ9Y496 699 aa14.53□□□□□ -0.08
CIITA-212ENST00000618207 PATL2C9JE40 543 aaKnown RBP14.52□□□□□ -0.08
CIITA-212ENST00000618207 CHAF1AQ13111 956 aaPredicted RBP14.52□□□□□ -0.08
CIITA-212ENST00000618207 ZSCAN16Q9H4T2 348 aaPredicted RBP14.52□□□□□ -0.08
CIITA-212ENST00000618207 ANGEL1Q9UNK9 670 aaKnown RBP14.52□□□□□ -0.08
CIITA-212ENST00000618207 TACC3Q9Y6A5 838 aa14.52□□□□□ -0.08
CIITA-212ENST00000618207 GSG1L2A8MUP6 293 aa14.52□□□□□ -0.09
CIITA-212ENST00000618207 TICAM2Q86XR7 235 aa14.52□□□□□ -0.09
CIITA-212ENST00000618207 ZSWIM5Q9P217 1185 aa14.52□□□□□ -0.09
CIITA-212ENST00000618207 RTCBQ9Y3I0 505 aaKnown RBP14.52□□□□□ -0.09
CIITA-212ENST00000618207 A0A087WWV3 80 aa14.51□□□□□ -0.09
CIITA-212ENST00000618207 MSNP26038 577 aaKnown RBP14.51□□□□□ -0.09
CIITA-212ENST00000618207 METAP2P50579 478 aaKnown RBP eCLIP14.51□□□□□ -0.09
CIITA-212ENST00000618207 TMEM67Q5HYA8 995 aa14.51□□□□□ -0.09
CIITA-212ENST00000618207 ARHGEF1Q92888 912 aaKnown RBP14.51□□□□□ -0.09
CIITA-212ENST00000618207 ERCC4Q92889 916 aaPredicted RBP14.51□□□□□ -0.09
CIITA-212ENST00000618207 FBXW7Q969H0 707 aa14.51□□□□□ -0.09
CIITA-212ENST00000618207 NLRP3Q96P20 1036 aa14.51□□□□□ -0.09
CIITA-212ENST00000618207 CFAP45Q9UL16 551 aa14.51□□□□□ -0.09
CIITA-212ENST00000618207 SALL1Q9NSC2 1324 aa14.51□□□□□ -0.09
CIITA-212ENST00000618207 IFIT3O14879 490 aaKnown RBP14.51□□□□□ -0.09
CIITA-212ENST00000618207 ME1P48163 572 aa14.51□□□□□ -0.09
CIITA-212ENST00000618207 CMTR1Q8N1G2 835 aaKnown RBP14.51□□□□□ -0.09
CIITA-212ENST00000618207 CYP2D7A0A087X1C5 515 aa14.51□□□□□ -0.09
CIITA-212ENST00000618207 LETM1O95202 739 aaPredicted RBP14.51□□□□□ -0.09
CIITA-212ENST00000618207 CDC27P30260 824 aa14.51□□□□□ -0.09
CIITA-212ENST00000618207 DYNLL1P63167 89 aaKnown RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms