RNA–Protein interactions for RNA: ENST00000617546.4

CUL4A-212, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 5,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-212ENST00000617546 POLKQ9UBT6 870 aa11.57□□□□□ -0.56
CUL4A-212ENST00000617546 SBNO2Q9Y2G9 1366 aa11.57□□□□□ -0.56
CUL4A-212ENST00000617546 BUB1BO60566 1050 aaPredicted RBP11.57□□□□□ -0.56
CUL4A-212ENST00000617546 AFMP43652 599 aa11.57□□□□□ -0.56
CUL4A-212ENST00000617546 ESR2Q92731 530 aa11.57□□□□□ -0.56
CUL4A-212ENST00000617546 RNF216Q9NWF9 866 aaPredicted RBP11.57□□□□□ -0.56
CUL4A-212ENST00000617546 EHMT1Q9H9B1 1298 aa11.57□□□□□ -0.56
CUL4A-212ENST00000617546 PAG1Q9NWQ8 432 aa11.57□□□□□ -0.56
CUL4A-212ENST00000617546 WWC3Q9ULE0 1092 aa11.57□□□□□ -0.56
CUL4A-212ENST00000617546 TRIM35Q9UPQ4 493 aa11.57□□□□□ -0.56
CUL4A-212ENST00000617546 RRP15Q9Y3B9 282 aaKnown RBP11.57□□□□□ -0.56
CUL4A-212ENST00000617546 KIAA0556O60303 1618 aa11.57□□□□□ -0.56
CUL4A-212ENST00000617546 URB2Q14146 1524 aaKnown RBP11.57□□□□□ -0.56
CUL4A-212ENST00000617546 ATP2A1O14983 1001 aa11.57□□□□□ -0.56
CUL4A-212ENST00000617546 ATP2C2O75185 946 aa11.57□□□□□ -0.56
CUL4A-212ENST00000617546 PDE4BQ07343 736 aa11.57□□□□□ -0.56
CUL4A-212ENST00000617546 UBE4AQ14139 1066 aa11.57□□□□□ -0.56
CUL4A-212ENST00000617546 PPP2R5BQ15173 497 aa11.57□□□□□ -0.56
CUL4A-212ENST00000617546 ERCC6LQ2NKX8 1250 aa11.57□□□□□ -0.56
CUL4A-212ENST00000617546 DAAM2Q86T65 1068 aa11.57□□□□□ -0.56
CUL4A-212ENST00000617546 ZRANB1Q9UGI0 708 aa11.57□□□□□ -0.56
CUL4A-212ENST00000617546 KCNH3Q9ULD8 1083 aa11.57□□□□□ -0.56
CUL4A-212ENST00000617546 TERF2Q15554 542 aa11.56□□□□□ -0.56
CUL4A-212ENST00000617546 TMEM87BQ96K49 555 aa11.56□□□□□ -0.56
CUL4A-212ENST00000617546 CAPZA3Q96KX2 299 aa11.56□□□□□ -0.56
CUL4A-212ENST00000617546 A0A1B0GVL5 298 aa11.56□□□□□ -0.56
CUL4A-212ENST00000617546 STX10O60499 249 aa11.56□□□□□ -0.56
CUL4A-212ENST00000617546 ZNF202O95125 648 aa11.56□□□□□ -0.56
CUL4A-212ENST00000617546 LUC7L3O95232 432 aaKnown RBP11.56□□□□□ -0.56
CUL4A-212ENST00000617546 TSPYL6Q8N831 410 aa11.56□□□□□ -0.56
CUL4A-212ENST00000617546 DHX58Q96C10 678 aa11.56□□□□□ -0.56
CUL4A-212ENST00000617546 NUCKS1Q9H1E3 243 aaKnown RBP11.56□□□□□ -0.56
CUL4A-212ENST00000617546 MINDY4BA8MYZ0 360 aa11.56□□□□□ -0.56
CUL4A-212ENST00000617546 ZNF76P36508 570 aa11.56□□□□□ -0.56
CUL4A-212ENST00000617546 SECISBP2LQ93073 1101 aaKnown RBP11.56□□□□□ -0.56
CUL4A-212ENST00000617546 SELENOSQ9BQE4 189 aa11.56□□□□□ -0.56
CUL4A-212ENST00000617546 DDX41Q9UJV9 622 aaKnown RBP11.56□□□□□ -0.56
CUL4A-212ENST00000617546 PRPF4BQ13523 1007 aaKnown RBP11.56□□□□□ -0.56
CUL4A-212ENST00000617546 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.56□□□□□ -0.56
CUL4A-212ENST00000617546 SREK1Q8WXA9 508 aaKnown RBP11.56□□□□□ -0.56
CUL4A-212ENST00000617546 KIAA1468Q9P260 1216 aa11.56□□□□□ -0.56
CUL4A-212ENST00000617546 MTMR6Q9Y217 621 aa11.56□□□□□ -0.56
CUL4A-212ENST00000617546 SYNRGQ9UMZ2 1314 aa11.56□□□□□ -0.56
CUL4A-212ENST00000617546 APOBRQ0VD83 1088 aa11.55□□□□□ -0.56
CUL4A-212ENST00000617546 TAOK1Q7L7X3 1001 aa11.55□□□□□ -0.56
CUL4A-212ENST00000617546 CABS1Q96KC9 395 aa11.55□□□□□ -0.56
CUL4A-212ENST00000617546 SMC6Q96SB8 1091 aa11.55□□□□□ -0.56
CUL4A-212ENST00000617546 PYCARDQ9ULZ3 195 aa11.55□□□□□ -0.56
CUL4A-212ENST00000617546 DNA2P51530 1060 aa11.55□□□□□ -0.56
CUL4A-212ENST00000617546 XPO4Q9C0E2 1151 aaKnown RBP11.55□□□□□ -0.56
CUL4A-212ENST00000617546 A0A1W2PQ27 194 aa11.55□□□□□ -0.56
CUL4A-212ENST00000617546 A0A1W2PQ64 194 aa11.55□□□□□ -0.56
CUL4A-212ENST00000617546 A0A1W2PQD8 194 aa11.55□□□□□ -0.56
CUL4A-212ENST00000617546 CCDC151A5D8V7 595 aa11.55□□□□□ -0.56
CUL4A-212ENST00000617546 RANBP6O60518 1105 aaKnown RBP11.55□□□□□ -0.56
CUL4A-212ENST00000617546 GSPT1P15170 499 aaKnown RBP11.55□□□□□ -0.56
CUL4A-212ENST00000617546 CTNNBL1Q8WYA6 563 aaPredicted RBP11.55□□□□□ -0.56
CUL4A-212ENST00000617546 TACO1Q9BSH4 297 aaKnown RBP11.55□□□□□ -0.56
CUL4A-212ENST00000617546 MKNK2Q9HBH9 465 aa11.55□□□□□ -0.56
CUL4A-212ENST00000617546 PPP2R2CQ9Y2T4 447 aa11.55□□□□□ -0.56
CUL4A-212ENST00000617546 ABCC1P33527 1531 aa11.55□□□□□ -0.56
CUL4A-212ENST00000617546 SAMD9Q5K651 1589 aa11.55□□□□□ -0.56
CUL4A-212ENST00000617546 SYCP2Q9BX26 1530 aa11.55□□□□□ -0.56
CUL4A-212ENST00000617546 NDC80O14777 642 aa11.55□□□□□ -0.56
CUL4A-212ENST00000617546 INTS8Q75QN2 995 aaKnown RBP11.55□□□□□ -0.56
CUL4A-212ENST00000617546 ERMNQ8TAM6 284 aa11.55□□□□□ -0.56
CUL4A-212ENST00000617546 ZNF622Q969S3 477 aaKnown RBP eCLIP11.55□□□□□ -0.567e-6■■■■□ 22.7
CUL4A-212ENST00000617546 ACTN4O43707 911 aaKnown RBP11.55□□□□□ -0.56
CUL4A-212ENST00000617546 ZNF444Q8N0Y2 327 aaPredicted RBP11.55□□□□□ -0.56
CUL4A-212ENST00000617546 NOX5Q96PH1 765 aa11.55□□□□□ -0.56
CUL4A-212ENST00000617546 ZSWIM6Q9HCJ5 1215 aa11.55□□□□□ -0.56
CUL4A-212ENST00000617546 HDAC9Q9UKV0 1011 aa11.55□□□□□ -0.56
CUL4A-212ENST00000617546 IKBKGQ9Y6K9 419 aa11.55□□□□□ -0.56
CUL4A-212ENST00000617546 NPATQ14207 1427 aa11.54□□□□□ -0.56
CUL4A-212ENST00000617546 SF3B2Q13435 895 aaKnown RBP11.54□□□□□ -0.56
CUL4A-212ENST00000617546 PPP2R5EQ16537 467 aa11.54□□□□□ -0.56
CUL4A-212ENST00000617546 SLF2Q8IX21 1173 aa11.54□□□□□ -0.56
CUL4A-212ENST00000617546 KAT14Q9H8E8 782 aa11.54□□□□□ -0.56
CUL4A-212ENST00000617546 MTUS1Q9ULD2 1270 aa11.54□□□□□ -0.56
CUL4A-212ENST00000617546 MRVI1Q9Y6F6 885 aa11.54□□□□□ -0.56
CUL4A-212ENST00000617546 IKBKBO14920 756 aa11.54□□□□□ -0.56
CUL4A-212ENST00000617546 PLCD1P51178 756 aa11.54□□□□□ -0.56
CUL4A-212ENST00000617546 SRGAP1Q7Z6B7 1085 aa11.54□□□□□ -0.56
CUL4A-212ENST00000617546 IFT81Q8WYA0 676 aa11.54□□□□□ -0.56
CUL4A-212ENST00000617546 SYTL4Q96C24 671 aaPredicted RBP11.54□□□□□ -0.56
CUL4A-212ENST00000617546 KIF3CO14782 793 aa11.54□□□□□ -0.56
CUL4A-212ENST00000617546 BANK1Q8NDB2 785 aa11.54□□□□□ -0.56
CUL4A-212ENST00000617546 CAPS2Q9BXY5 557 aa11.54□□□□□ -0.56
CUL4A-212ENST00000617546 NKIRAS1Q9NYS0 192 aa11.54□□□□□ -0.56
CUL4A-212ENST00000617546 FLT4P35916 1363 aa11.54□□□□□ -0.56
CUL4A-212ENST00000617546 CFAP221Q4G0U5 840 aa11.54□□□□□ -0.56
CUL4A-212ENST00000617546 ARMC9Q7Z3E5 817 aa11.54□□□□□ -0.56
CUL4A-212ENST00000617546 PPP1R13BQ96KQ4 1090 aa11.54□□□□□ -0.56
CUL4A-212ENST00000617546 NAP1L4Q99733 375 aaKnown RBP11.54□□□□□ -0.56
CUL4A-212ENST00000617546 STAP2Q9UGK3 403 aa11.54□□□□□ -0.56
CUL4A-212ENST00000617546 SAR1BQ9Y6B6 198 aa11.54□□□□□ -0.56
CUL4A-212ENST00000617546 REREQ9P2R6 1566 aa11.54□□□□□ -0.56
CUL4A-212ENST00000617546 A0A1W2PP64 1363 aa11.54□□□□□ -0.56
CUL4A-212ENST00000617546 MAP3K5Q99683 1374 aa11.54□□□□□ -0.56
CUL4A-212ENST00000617546 SNRPA1P09661 255 aaKnown RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms