RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 UNCXA6NJT0 531 aa10.81□□□□□ -0.68
GPC6-202ENST00000617456 CSF1RP07333 972 aa10.81□□□□□ -0.68
GPC6-202ENST00000617456 CASP7P55210 303 aa10.81□□□□□ -0.68
GPC6-202ENST00000617456 TAF1CQ15572 869 aaPredicted RBP10.81□□□□□ -0.68
GPC6-202ENST00000617456 SLC9C1Q4G0N8 1177 aa10.81□□□□□ -0.68
GPC6-202ENST00000617456 ZNF333Q96JL9 665 aa10.81□□□□□ -0.68
GPC6-202ENST00000617456 MYH16Q9H6N6 1097 aa10.81□□□□□ -0.68
GPC6-202ENST00000617456 IRS2Q9Y4H2 1338 aa10.81□□□□□ -0.68
GPC6-202ENST00000617456 CCL15-CCL14A0A0B4J2E2 113 aa10.8□□□□□ -0.68
GPC6-202ENST00000617456 TESPA1A2RU30 521 aaPredicted RBP10.8□□□□□ -0.68
GPC6-202ENST00000617456 VAMP4O75379 141 aa10.8□□□□□ -0.68
GPC6-202ENST00000617456 ECM2O94769 699 aaPredicted RBP10.8□□□□□ -0.68
GPC6-202ENST00000617456 IL1R1P14778 569 aa10.8□□□□□ -0.68
GPC6-202ENST00000617456 CCL15Q16663 113 aa10.8□□□□□ -0.68
GPC6-202ENST00000617456 NBPF11Q86T75 865 aa10.8□□□□□ -0.68
GPC6-202ENST00000617456 CDAN1Q8IWY9 1227 aa10.8□□□□□ -0.68
GPC6-202ENST00000617456 LINS1Q8NG48 757 aa10.8□□□□□ -0.68
GPC6-202ENST00000617456 BRI3BPQ8WY22 251 aa10.8□□□□□ -0.68
GPC6-202ENST00000617456 TDRD3Q9H7E2 651 aaKnown RBP10.8□□□□□ -0.68
GPC6-202ENST00000617456 ZFYVE28Q9HCC9 887 aa10.8□□□□□ -0.68
GPC6-202ENST00000617456 ZNF70Q9UC06 446 aaPredicted RBP10.8□□□□□ -0.68
GPC6-202ENST00000617456 FANCIQ9NVI1 1328 aa10.8□□□□□ -0.68
GPC6-202ENST00000617456 TCP10L2B9ZVM9 353 aa10.79□□□□□ -0.68
GPC6-202ENST00000617456 H0YGN5 161 aa10.79□□□□□ -0.68
GPC6-202ENST00000617456 FKBP1AP62942 108 aaKnown RBP10.79□□□□□ -0.68
GPC6-202ENST00000617456 FLIIQ13045 1269 aa10.79□□□□□ -0.68
GPC6-202ENST00000617456 IFIT5Q13325 482 aaKnown RBP10.79□□□□□ -0.68
GPC6-202ENST00000617456 FKBP5Q13451 457 aaPredicted RBP10.79□□□□□ -0.68
GPC6-202ENST00000617456 TNFAIP1Q13829 316 aa10.79□□□□□ -0.68
GPC6-202ENST00000617456 ARHGEF6Q15052 776 aa10.79□□□□□ -0.68
GPC6-202ENST00000617456 C15orf52Q6ZUT6 534 aaKnown RBP10.79□□□□□ -0.68
GPC6-202ENST00000617456 SH3TC2Q8TF17 1288 aa10.79□□□□□ -0.68
GPC6-202ENST00000617456 DNAAF4Q8WXU2 420 aa10.79□□□□□ -0.68
GPC6-202ENST00000617456 OTUD5Q96G74 571 aa10.79□□□□□ -0.68
GPC6-202ENST00000617456 MS4A4AQ96JQ5 239 aa10.79□□□□□ -0.68
GPC6-202ENST00000617456 TTF2Q9UNY4 1162 aaKnown RBP10.79□□□□□ -0.68
GPC6-202ENST00000617456 BRCA2P51587 3418 aa10.78□□□□□ -0.68
GPC6-202ENST00000617456 GTF2A2P52657 109 aa10.78□□□□□ -0.68
GPC6-202ENST00000617456 MAP3K9P80192 1104 aa10.78□□□□□ -0.68
GPC6-202ENST00000617456 VGLL4Q14135 290 aa10.78□□□□□ -0.68
GPC6-202ENST00000617456 SPDYE2Q495Y8 402 aa10.78□□□□□ -0.68
GPC6-202ENST00000617456 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.78□□□□□ -0.68
GPC6-202ENST00000617456 FAM43AQ8N2R8 423 aa10.78□□□□□ -0.68
GPC6-202ENST00000617456 ZNF594Q96JF6 807 aaPredicted RBP10.78□□□□□ -0.68
GPC6-202ENST00000617456 ARHGAP39Q9C0H5 1083 aa10.78□□□□□ -0.68
GPC6-202ENST00000617456 TMEM39BQ9GZU3 492 aa10.78□□□□□ -0.68
GPC6-202ENST00000617456 FOXO4P98177 505 aa10.77□□□□□ -0.69
GPC6-202ENST00000617456 MFSD14BQ5SR56 506 aa10.77□□□□□ -0.69
GPC6-202ENST00000617456 LMBR1LQ6UX01 489 aa10.77□□□□□ -0.69
GPC6-202ENST00000617456 TEPSINQ96N21 525 aa10.77□□□□□ -0.69
GPC6-202ENST00000617456 CNNM1Q9NRU3 951 aa10.77□□□□□ -0.69
GPC6-202ENST00000617456 CSADQ9Y600 493 aa10.77□□□□□ -0.69
GPC6-202ENST00000617456 RBBP6Q7Z6E9 1792 aaKnown RBP10.77□□□□□ -0.69
GPC6-202ENST00000617456 ECM29Q5VYK3 1845 aa10.77□□□□□ -0.69
GPC6-202ENST00000617456 WDHD1O75717 1129 aaPredicted RBP10.76□□□□□ -0.69
GPC6-202ENST00000617456 GYG1P46976 350 aa10.76□□□□□ -0.69
GPC6-202ENST00000617456 KIF22Q14807 665 aa10.76□□□□□ -0.69
GPC6-202ENST00000617456 CCDC57Q2TAC2 916 aa10.76□□□□□ -0.69
GPC6-202ENST00000617456 CHRDL2Q6WN34 429 aa10.76□□□□□ -0.69
GPC6-202ENST00000617456 LDHAL6AQ6ZMR3 332 aa10.76□□□□□ -0.69
GPC6-202ENST00000617456 DZIP1LQ8IYY4 767 aaKnown RBP10.76□□□□□ -0.69
GPC6-202ENST00000617456 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.76□□□□□ -0.69
GPC6-202ENST00000617456 DPF3Q92784 378 aa10.76□□□□□ -0.69
GPC6-202ENST00000617456 ZMYND15Q9H091 742 aa10.76□□□□□ -0.69
GPC6-202ENST00000617456 SERPINA10Q9UK55 444 aa10.76□□□□□ -0.69
GPC6-202ENST00000617456 ZNF521Q96K83 1311 aa10.76□□□□□ -0.69
GPC6-202ENST00000617456 OTOFQ9HC10 1997 aa10.76□□□□□ -0.69
GPC6-202ENST00000617456 F6X3S4 739 aa10.75□□□□□ -0.69
GPC6-202ENST00000617456 HIBADHP31937 336 aaKnown RBP10.75□□□□□ -0.69
GPC6-202ENST00000617456 CRKP46108 304 aa10.75□□□□□ -0.69
GPC6-202ENST00000617456 TNNI2P48788 182 aa10.75□□□□□ -0.69
GPC6-202ENST00000617456 CACNB3P54284 484 aa10.75□□□□□ -0.69
GPC6-202ENST00000617456 EXOSC9Q06265 439 aaKnown RBP10.75□□□□□ -0.69
GPC6-202ENST00000617456 CHAF1AQ13111 956 aaPredicted RBP10.75□□□□□ -0.69
GPC6-202ENST00000617456 EPHA10Q5JZY3 1008 aa10.75□□□□□ -0.69
GPC6-202ENST00000617456 SAMD1Q6SPF0 538 aaPredicted RBP10.75□□□□□ -0.69
GPC6-202ENST00000617456 IQSEC3Q9UPP2 1182 aaPredicted RBP10.75□□□□□ -0.69
GPC6-202ENST00000617456 FAM205AQ6ZU69 1335 aa10.75□□□□□ -0.69
GPC6-202ENST00000617456 BTBD19C9JJ37 291 aa10.74□□□□□ -0.69
GPC6-202ENST00000617456 TLR2O60603 784 aa10.74□□□□□ -0.69
GPC6-202ENST00000617456 ALDH1L1O75891 902 aa10.74□□□□□ -0.69
GPC6-202ENST00000617456 CETPP11597 493 aa10.74□□□□□ -0.69
GPC6-202ENST00000617456 DEKP35659 375 aaKnown RBP10.74□□□□□ -0.69
GPC6-202ENST00000617456 LACTBP83111 547 aaPredicted RBP10.74□□□□□ -0.69
GPC6-202ENST00000617456 RBM10P98175 930 aaKnown RBP10.74□□□□□ -0.69
GPC6-202ENST00000617456 GRIK5Q16478 980 aa10.74□□□□□ -0.69
GPC6-202ENST00000617456 TDRD7Q8NHU6 1098 aaKnown RBP10.74□□□□□ -0.69
GPC6-202ENST00000617456 CCDC136Q96JN2 1154 aa10.74□□□□□ -0.69
GPC6-202ENST00000617456 WRNIP1Q96S55 665 aa10.74□□□□□ -0.69
GPC6-202ENST00000617456 BCCIPQ9P287 314 aaKnown RBP eCLIP10.74□□□□□ -0.69
GPC6-202ENST00000617456 SNCAIPQ9Y6H5 919 aa10.74□□□□□ -0.69
GPC6-202ENST00000617456 LAMB1P07942 1786 aa10.74□□□□□ -0.69
GPC6-202ENST00000617456 SPDYE5A6NIY4 337 aa10.73□□□□□ -0.69
GPC6-202ENST00000617456 E9PSI1 815 aa10.73□□□□□ -0.69
GPC6-202ENST00000617456 SNAPC2Q13487 334 aa10.73□□□□□ -0.69
GPC6-202ENST00000617456 MTFR1Q15390 333 aa10.73□□□□□ -0.69
GPC6-202ENST00000617456 BEND3Q5T5X7 828 aa10.73□□□□□ -0.69
GPC6-202ENST00000617456 ERO1BQ86YB8 467 aa10.73□□□□□ -0.69
GPC6-202ENST00000617456 FAM9BQ8IZU0 186 aa10.73□□□□□ -0.69
GPC6-202ENST00000617456 ZKSCAN4Q969J2 545 aaPredicted RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms