RNA–Protein interactions for RNA: ENST00000616179.4

SYNRG-223, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNRG, Length 4,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-223ENST00000616179 FAM71BQ8TC56 605 aa17.82■□□□□ 0.44
SYNRG-223ENST00000616179 GPHNQ9NQX3 736 aaPredicted RBP17.82■□□□□ 0.44
SYNRG-223ENST00000616179 MYSM1Q5VVJ2 828 aa17.81■□□□□ 0.44
SYNRG-223ENST00000616179 SCLT1Q96NL6 688 aa17.81■□□□□ 0.44
SYNRG-223ENST00000616179 CDC23Q9UJX2 597 aa17.81■□□□□ 0.44
SYNRG-223ENST00000616179 RNF17Q9BXT8 1623 aaKnown RBP17.81■□□□□ 0.44
SYNRG-223ENST00000616179 EFCAB13Q8IY85 973 aa17.81■□□□□ 0.44
SYNRG-223ENST00000616179 ACEP12821 1306 aa17.81■□□□□ 0.44
SYNRG-223ENST00000616179 PNPLA6Q8IY17 1366 aa17.81■□□□□ 0.44
SYNRG-223ENST00000616179 NPATQ14207 1427 aa17.81■□□□□ 0.44
SYNRG-223ENST00000616179 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.81■□□□□ 0.44
SYNRG-223ENST00000616179 TFRCP02786 760 aaKnown RBP17.81■□□□□ 0.44
SYNRG-223ENST00000616179 EIF5P55010 431 aaKnown RBP17.81■□□□□ 0.44
SYNRG-223ENST00000616179 IMMTQ16891 758 aaKnown RBP17.81■□□□□ 0.44
SYNRG-223ENST00000616179 FMR1NBQ8N0W7 255 aaPredicted RBP17.81■□□□□ 0.44
SYNRG-223ENST00000616179 ABTB2Q8N961 1025 aa17.81■□□□□ 0.44
SYNRG-223ENST00000616179 PCDHA5Q9Y5H7 936 aa17.81■□□□□ 0.44
SYNRG-223ENST00000616179 VWA3AA6NCI4 1184 aa17.8■□□□□ 0.44
SYNRG-223ENST00000616179 NOP2P46087 812 aaKnown RBP17.8■□□□□ 0.44
SYNRG-223ENST00000616179 ODF2Q5BJF6 829 aa17.8■□□□□ 0.44
SYNRG-223ENST00000616179 NCAPH2Q6IBW4 605 aa17.8■□□□□ 0.44
SYNRG-223ENST00000616179 PLCD4Q9BRC7 762 aa17.8■□□□□ 0.44
SYNRG-223ENST00000616179 DBF4Q9UBU7 674 aaPredicted RBP17.8■□□□□ 0.44
SYNRG-223ENST00000616179 MRFAP1Q9Y605 127 aa17.8■□□□□ 0.44
SYNRG-223ENST00000616179 SHPRHQ149N8 1683 aa17.8■□□□□ 0.44
SYNRG-223ENST00000616179 A0A087WUV0 522 aaPredicted RBP17.8■□□□□ 0.44
SYNRG-223ENST00000616179 VSTM4Q8IW00 320 aa17.8■□□□□ 0.44
SYNRG-223ENST00000616179 FANCAO15360 1455 aa17.8■□□□□ 0.44
SYNRG-223ENST00000616179 ABCA8O94911 1581 aa17.8■□□□□ 0.44
SYNRG-223ENST00000616179 ATP5J2-PTCD1G3V325 749 aa17.8■□□□□ 0.44
SYNRG-223ENST00000616179 GRM8O00222 908 aa17.8■□□□□ 0.44
SYNRG-223ENST00000616179 KCNQ3O43525 872 aa17.8■□□□□ 0.44
SYNRG-223ENST00000616179 PTCD1O75127 700 aaKnown RBP17.8■□□□□ 0.44
SYNRG-223ENST00000616179 ECM2O94769 699 aaPredicted RBP17.8■□□□□ 0.44
SYNRG-223ENST00000616179 MRPS25P82663 173 aaKnown RBP17.8■□□□□ 0.44
SYNRG-223ENST00000616179 RBM43Q6ZSC3 357 aaKnown RBP17.8■□□□□ 0.44
SYNRG-223ENST00000616179 LINC00301Q8NCQ3 95 aa17.8■□□□□ 0.44
SYNRG-223ENST00000616179 NUP133Q8WUM0 1156 aa17.8■□□□□ 0.44
SYNRG-223ENST00000616179 MYOM2P54296 1465 aa17.8■□□□□ 0.44
SYNRG-223ENST00000616179 ABCA6Q8N139 1617 aa17.8■□□□□ 0.44
SYNRG-223ENST00000616179 ATP1A2P50993 1020 aa17.79■□□□□ 0.44
SYNRG-223ENST00000616179 VSNL1P62760 191 aa17.79■□□□□ 0.44
SYNRG-223ENST00000616179 TFCP2Q12800 502 aa17.79■□□□□ 0.44
SYNRG-223ENST00000616179 PSMB7Q99436 277 aa17.79■□□□□ 0.44
SYNRG-223ENST00000616179 POLD4Q9HCU8 107 aa17.79■□□□□ 0.44
SYNRG-223ENST00000616179 KCNH3Q9ULD8 1083 aa17.79■□□□□ 0.44
SYNRG-223ENST00000616179 MAP3K4Q9Y6R4 1608 aa17.79■□□□□ 0.44
SYNRG-223ENST00000616179 TTC21BQ7Z4L5 1316 aa17.79■□□□□ 0.44
SYNRG-223ENST00000616179 GNGT1P63211 74 aa17.79■□□□□ 0.44
SYNRG-223ENST00000616179 DBNDD2Q9BQY9 259 aa17.79■□□□□ 0.44
SYNRG-223ENST00000616179 LLPHQ9BRT6 129 aaKnown RBP17.79■□□□□ 0.44
SYNRG-223ENST00000616179 BCCIPQ9P287 314 aaKnown RBP eCLIP17.79■□□□□ 0.44
SYNRG-223ENST00000616179 CCDC93Q567U6 631 aa17.79■□□□□ 0.44
SYNRG-223ENST00000616179 GEMIN8Q9NWZ8 242 aaKnown RBP17.79■□□□□ 0.44
SYNRG-223ENST00000616179 STX10O60499 249 aa17.78■□□□□ 0.44
SYNRG-223ENST00000616179 PPFIA4O75335 1185 aa17.78■□□□□ 0.44
SYNRG-223ENST00000616179 GSPT2Q8IYD1 628 aaKnown RBP17.78■□□□□ 0.44
SYNRG-223ENST00000616179 ACRBPQ8NEB7 543 aa17.78■□□□□ 0.44
SYNRG-223ENST00000616179 ZNF526Q8TF50 670 aaPredicted RBP17.78■□□□□ 0.44
SYNRG-223ENST00000616179 SUCLG2Q96I99 432 aa17.78■□□□□ 0.44
SYNRG-223ENST00000616179 VPS16Q9H269 839 aa17.78■□□□□ 0.44
SYNRG-223ENST00000616179 CXorf56Q9H5V9 222 aa17.78■□□□□ 0.44
SYNRG-223ENST00000616179 PRC1O43663 620 aa17.78■□□□□ 0.44
SYNRG-223ENST00000616179 PFKFB2O60825 505 aa17.78■□□□□ 0.44
SYNRG-223ENST00000616179 MAP3K9P80192 1104 aa17.78■□□□□ 0.44
SYNRG-223ENST00000616179 UBE3BQ7Z3V4 1068 aa17.78■□□□□ 0.44
SYNRG-223ENST00000616179 REXO1L1PQ8IX06 675 aa17.78■□□□□ 0.44
SYNRG-223ENST00000616179 KLHL34Q8N239 644 aa17.78■□□□□ 0.44
SYNRG-223ENST00000616179 POLR2DO15514 142 aaKnown RBP17.78■□□□□ 0.44
SYNRG-223ENST00000616179 IFIT1P09914 478 aaKnown RBP17.78■□□□□ 0.44
SYNRG-223ENST00000616179 CUTAO60888 179 aa17.77■□□□□ 0.44
SYNRG-223ENST00000616179 HDGFP51858 240 aaKnown RBP17.77■□□□□ 0.44
SYNRG-223ENST00000616179 ATL3Q6DD88 541 aa17.77■□□□□ 0.44
SYNRG-223ENST00000616179 NUTM2AQ8IVF1 878 aaPredicted RBP17.77■□□□□ 0.44
SYNRG-223ENST00000616179 IL17REQ8NFR9 667 aa17.77■□□□□ 0.44
SYNRG-223ENST00000616179 STAMQ92783 540 aa17.77■□□□□ 0.44
SYNRG-223ENST00000616179 REREQ9P2R6 1566 aa17.77■□□□□ 0.44
SYNRG-223ENST00000616179 GOLGA6BA6NDN3 693 aa17.77■□□□□ 0.44
SYNRG-223ENST00000616179 PPP2R5AQ15172 486 aa17.77■□□□□ 0.44
SYNRG-223ENST00000616179 SND1Q7KZF4 910 aaKnown RBP eCLIP17.77■□□□□ 0.44
SYNRG-223ENST00000616179 PHKBQ93100 1093 aa17.77■□□□□ 0.44
SYNRG-223ENST00000616179 ZNHIT6Q9NWK9 470 aaKnown RBP17.77■□□□□ 0.44
SYNRG-223ENST00000616179 GRAMD1CQ8IYS0 662 aa17.77■□□□□ 0.44
SYNRG-223ENST00000616179 SAMSN1Q9NSI8 373 aaKnown RBP17.77■□□□□ 0.44
SYNRG-223ENST00000616179 GOLGA6L7A0A1B0GV03 622 aa17.77■□□□□ 0.43
SYNRG-223ENST00000616179 NEBLO76041 1014 aa17.77■□□□□ 0.43
SYNRG-223ENST00000616179 TTC39AQ5SRH9 613 aa17.77■□□□□ 0.43
SYNRG-223ENST00000616179 TRIM65Q6PJ69 517 aa17.77■□□□□ 0.43
SYNRG-223ENST00000616179 SLC26A6Q9BXS9 759 aa17.77■□□□□ 0.43
SYNRG-223ENST00000616179 MCM3P25205 808 aa17.76■□□□□ 0.43
SYNRG-223ENST00000616179 BEND3Q5T5X7 828 aa17.76■□□□□ 0.43
SYNRG-223ENST00000616179 PNKPQ96T60 521 aa17.76■□□□□ 0.43
SYNRG-223ENST00000616179 MAPK8IP1Q9UQF2 711 aa17.76■□□□□ 0.43
SYNRG-223ENST00000616179 CCDC172P0C7W6 258 aa17.76■□□□□ 0.43
SYNRG-223ENST00000616179 LGR6Q9HBX8 967 aa17.76■□□□□ 0.43
SYNRG-223ENST00000616179 RTEL1Q9NZ71 1219 aa17.76■□□□□ 0.43
SYNRG-223ENST00000616179 YEATS4O95619 227 aa17.76■□□□□ 0.43
SYNRG-223ENST00000616179 PDIA3P30101 505 aaKnown RBP17.76■□□□□ 0.43
SYNRG-223ENST00000616179 GBP2P32456 591 aaPredicted RBP17.76■□□□□ 0.43
SYNRG-223ENST00000616179 METAP2P50579 478 aaKnown RBP eCLIP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms