RNA–Protein interactions for RNA: ENST00000616010.4

CCND3-223, Transcript of cyclin D3, humanhuman

TSL 5 BASIC

Gene CCND3, Length 2,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-223ENST00000616010 ZNF384Q8TF68 577 aa28.12■■■□□ 2.09
CCND3-223ENST00000616010 MAP4K1Q92918 833 aa28.12■■■□□ 2.09
CCND3-223ENST00000616010 ADGRA1Q86SQ6 560 aa28.11■■■□□ 2.09
CCND3-223ENST00000616010 DZIP1Q86YF9 867 aaKnown RBP28.11■■■□□ 2.09
CCND3-223ENST00000616010 AIDAQ96BJ3 306 aa28.11■■■□□ 2.09
CCND3-223ENST00000616010 RBM8AQ9Y5S9 174 aaKnown RBP28.11■■■□□ 2.09
CCND3-223ENST00000616010 ARFGEF1Q9Y6D6 1849 aa28.11■■■□□ 2.09
CCND3-223ENST00000616010 SCN9AQ15858 1988 aa28.11■■■□□ 2.09
CCND3-223ENST00000616010 HSPA4P34932 840 aa28.11■■■□□ 2.09
CCND3-223ENST00000616010 TBC1D22AQ8WUA7 517 aa28.11■■■□□ 2.09
CCND3-223ENST00000616010 KIF2CQ99661 725 aa28.11■■■□□ 2.09
CCND3-223ENST00000616010 ZNF277Q9NRM2 450 aaPredicted RBP28.11■■■□□ 2.09
CCND3-223ENST00000616010 GRIK5Q16478 980 aa28.1■■■□□ 2.09
CCND3-223ENST00000616010 PALD1Q9ULE6 856 aa28.1■■■□□ 2.09
CCND3-223ENST00000616010 MIGA1Q8NAN2 632 aa28.09■■■□□ 2.09
CCND3-223ENST00000616010 MBD4O95243 580 aa28.09■■■□□ 2.09
CCND3-223ENST00000616010 HSPD1P10809 573 aaKnown RBP28.09■■■□□ 2.09
CCND3-223ENST00000616010 TTLL5Q6EMB2 1281 aa28.09■■■□□ 2.09
CCND3-223ENST00000616010 DSCC1Q9BVC3 393 aa28.08■■■□□ 2.09
CCND3-223ENST00000616010 TAOK3Q9H2K8 898 aa28.08■■■□□ 2.09
CCND3-223ENST00000616010 ZNF646O15015 1829 aaPredicted RBP28.07■■■□□ 2.08
CCND3-223ENST00000616010 LARGE2Q8N3Y3 721 aa28.07■■■□□ 2.08
CCND3-223ENST00000616010 ARMT1Q9H993 441 aa28.07■■■□□ 2.08
CCND3-223ENST00000616010 KCNQ5Q9NR82 932 aa28.07■■■□□ 2.08
CCND3-223ENST00000616010 COL4A5P29400 1685 aa28.07■■■□□ 2.08
CCND3-223ENST00000616010 SRCAPQ6ZRS2 3230 aa28.06■■■□□ 2.08
CCND3-223ENST00000616010 FOXP2O15409 715 aa28.06■■■□□ 2.08
CCND3-223ENST00000616010 NECTIN1Q15223 517 aa28.06■■■□□ 2.08
CCND3-223ENST00000616010 LCORLQ8N3X6 602 aa28.06■■■□□ 2.08
CCND3-223ENST00000616010 IGSF3O75054 1194 aa28.05■■■□□ 2.08
CCND3-223ENST00000616010 STRBPQ96SI9 672 aaKnown RBP28.05■■■□□ 2.08
CCND3-223ENST00000616010 U3KPZ7 1027 aaPredicted RBP28.05■■■□□ 2.08
CCND3-223ENST00000616010 MAGEB6P1A0A0J9YX57 407 aa28.04■■■□□ 2.08
CCND3-223ENST00000616010 NFKBIEO00221 500 aa28.04■■■□□ 2.08
CCND3-223ENST00000616010 ANAPC15P60006 121 aa28.04■■■□□ 2.08
CCND3-223ENST00000616010 TMED8Q6PL24 325 aaPredicted RBP28.04■■■□□ 2.08
CCND3-223ENST00000616010 CERS5Q8N5B7 392 aa28.04■■■□□ 2.08
CCND3-223ENST00000616010 MXD3Q9BW11 206 aa28.04■■■□□ 2.08
CCND3-223ENST00000616010 MYH2Q9UKX2 1941 aa28.04■■■□□ 2.08
CCND3-223ENST00000616010 IARSP41252 1262 aaKnown RBP28.04■■■□□ 2.08
CCND3-223ENST00000616010 DIXDC1Q155Q3 683 aa28.04■■■□□ 2.08
CCND3-223ENST00000616010 CREB3L3Q68CJ9 461 aa28.04■■■□□ 2.08
CCND3-223ENST00000616010 VPS33BQ9H267 617 aa28.04■■■□□ 2.08
CCND3-223ENST00000616010 STRIP1Q5VSL9 837 aa28.03■■■□□ 2.08
CCND3-223ENST00000616010 PSME4Q14997 1843 aa28.03■■■□□ 2.08
CCND3-223ENST00000616010 YDJCA8MPS7 323 aa28.02■■■□□ 2.08
CCND3-223ENST00000616010 GSTO1P78417 241 aa28.02■■■□□ 2.08
CCND3-223ENST00000616010 RASEFQ8IZ41 740 aa28.02■■■□□ 2.08
CCND3-223ENST00000616010 RIOK1Q9BRS2 568 aaKnown RBP28.02■■■□□ 2.08
CCND3-223ENST00000616010 SNX14Q9Y5W7 946 aa28.02■■■□□ 2.08
CCND3-223ENST00000616010 SLC27A2O14975 620 aa28.02■■■□□ 2.08
CCND3-223ENST00000616010 SYT17Q9BSW7 474 aa28.02■■■□□ 2.08
CCND3-223ENST00000616010 USP17L3A6NCW0 530 aa28.01■■■□□ 2.07
CCND3-223ENST00000616010 USP17L4A6NCW7 530 aa28.01■■■□□ 2.07
CCND3-223ENST00000616010 DYNLL1P63167 89 aaKnown RBP28.01■■■□□ 2.07
CCND3-223ENST00000616010 RNF20Q5VTR2 975 aa28.01■■■□□ 2.07
CCND3-223ENST00000616010 USP17L1Q7RTZ2 530 aa28.01■■■□□ 2.07
CCND3-223ENST00000616010 AATFQ9NY61 560 aaKnown RBP eCLIP28.01■■■□□ 2.07
CCND3-223ENST00000616010 SUGT1Q9Y2Z0 365 aa28.01■■■□□ 2.07
CCND3-223ENST00000616010 F8W031 263 aaPredicted RBP28■■■□□ 2.07
CCND3-223ENST00000616010 APPP05067 770 aa28■■■□□ 2.07
CCND3-223ENST00000616010 ZKSCAN1P17029 563 aaPredicted RBP28■■■□□ 2.07
CCND3-223ENST00000616010 RABEP1Q15276 862 aa28■■■□□ 2.07
CCND3-223ENST00000616010 DACT2Q5SW24 774 aa28■■■□□ 2.07
CCND3-223ENST00000616010 NIM1KQ8IY84 436 aa28■■■□□ 2.07
CCND3-223ENST00000616010 MROH7-TTC4A0A0A0MT08 1334 aa28■■■□□ 2.07
CCND3-223ENST00000616010 GNAT2P19087 354 aa27.99■■■□□ 2.07
CCND3-223ENST00000616010 RASSF7Q02833 373 aa27.99■■■□□ 2.07
CCND3-223ENST00000616010 KCNB2Q92953 911 aa27.99■■■□□ 2.07
CCND3-223ENST00000616010 SLC4A4Q9Y6R1 1079 aa27.99■■■□□ 2.07
CCND3-223ENST00000616010 PRKAB2O43741 272 aa27.99■■■□□ 2.07
CCND3-223ENST00000616010 IL17RAQ96F46 866 aa27.99■■■□□ 2.07
CCND3-223ENST00000616010 DDRGK1Q96HY6 314 aa27.99■■■□□ 2.07
CCND3-223ENST00000616010 LTBP3Q9NS15 1303 aa27.99■■■□□ 2.07
CCND3-223ENST00000616010 TTF2Q9UNY4 1162 aaKnown RBP27.98■■■□□ 2.07
CCND3-223ENST00000616010 UTRNP46939 3433 aa27.98■■■□□ 2.07
CCND3-223ENST00000616010 FGAP02671 866 aa27.97■■■□□ 2.07
CCND3-223ENST00000616010 LDHCP07864 332 aa27.97■■■□□ 2.07
CCND3-223ENST00000616010 CYP21A2P08686 494 aa27.97■■■□□ 2.07
CCND3-223ENST00000616010 FKBP1AP62942 108 aaKnown RBP27.97■■■□□ 2.07
CCND3-223ENST00000616010 EPB41L4AQ9HCS5 686 aaPredicted RBP27.97■■■□□ 2.07
CCND3-223ENST00000616010 TAF6LQ9Y6J9 622 aa27.97■■■□□ 2.07
CCND3-223ENST00000616010 CTNNA3Q9UI47 895 aa27.97■■■□□ 2.07
CCND3-223ENST00000616010 PATL2C9JE40 543 aaKnown RBP27.96■■■□□ 2.07
CCND3-223ENST00000616010 SLF2Q8IX21 1173 aa27.96■■■□□ 2.07
CCND3-223ENST00000616010 SDR42E1Q8WUS8 393 aa27.96■■■□□ 2.07
CCND3-223ENST00000616010 ADAMTSL1Q8N6G6 1762 aa27.96■■■□□ 2.07
CCND3-223ENST00000616010 GSG1L2A8MUP6 293 aa27.96■■■□□ 2.07
CCND3-223ENST00000616010 NOL10Q9BSC4 688 aaKnown RBP27.96■■■□□ 2.07
CCND3-223ENST00000616010 ZNRF3Q9ULT6 936 aa27.96■■■□□ 2.07
CCND3-223ENST00000616010 LAMA4Q16363 1823 aa27.95■■■□□ 2.06
CCND3-223ENST00000616010 RAD17O75943 681 aa27.95■■■□□ 2.06
CCND3-223ENST00000616010 ADCK5Q3MIX3 580 aa27.94■■■□□ 2.06
CCND3-223ENST00000616010 KIAA0825Q8IV33 1275 aa27.94■■■□□ 2.06
CCND3-223ENST00000616010 IFNL3Q8IZI9 196 aa27.94■■■□□ 2.06
CCND3-223ENST00000616010 JDP2Q8WYK2 163 aa27.94■■■□□ 2.06
CCND3-223ENST00000616010 GAKO14976 1311 aa27.94■■■□□ 2.06
CCND3-223ENST00000616010 ZMYM6O95789 1325 aa27.94■■■□□ 2.06
CCND3-223ENST00000616010 BAG3O95817 575 aa27.94■■■□□ 2.06
CCND3-223ENST00000616010 BTDP43251 543 aa27.94■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms