RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 CEP112Q8N8E3 955 aa11.88□□□□□ -0.51
TNFAIP3-208ENST00000615468 CARD10Q9BWT7 1032 aa11.88□□□□□ -0.51
TNFAIP3-208ENST00000615468 BCCIPQ9P287 314 aaKnown RBP eCLIP11.88□□□□□ -0.51
TNFAIP3-208ENST00000615468 TMEM232C9JQI7 657 aa11.87□□□□□ -0.51
TNFAIP3-208ENST00000615468 SCP2P22307 547 aa11.87□□□□□ -0.51
TNFAIP3-208ENST00000615468 RCOR1Q9UKL0 485 aa11.87□□□□□ -0.51
TNFAIP3-208ENST00000615468 FAM169AQ9Y6X4 670 aa11.87□□□□□ -0.51
TNFAIP3-208ENST00000615468 Q6ZUG5 572 aa11.87□□□□□ -0.51
TNFAIP3-208ENST00000615468 AACSQ86V21 672 aa11.87□□□□□ -0.51
TNFAIP3-208ENST00000615468 CRACR2AQ9BSW2 395 aa11.87□□□□□ -0.51
TNFAIP3-208ENST00000615468 DNAJC5Q9H3Z4 198 aa11.87□□□□□ -0.51
TNFAIP3-208ENST00000615468 SLC24A3Q9HC58 644 aa11.87□□□□□ -0.51
TNFAIP3-208ENST00000615468 ECHDC1Q9NTX5 307 aa11.87□□□□□ -0.51
TNFAIP3-208ENST00000615468 CTAGE15A4D2H0 777 aa11.87□□□□□ -0.51
TNFAIP3-208ENST00000615468 CTAGE8P0CG41 777 aa11.87□□□□□ -0.51
TNFAIP3-208ENST00000615468 NF2P35240 595 aa11.87□□□□□ -0.51
TNFAIP3-208ENST00000615468 CTAGE6Q86UF2 777 aa11.87□□□□□ -0.51
TNFAIP3-208ENST00000615468 CTAGE4Q8IX94 777 aa11.87□□□□□ -0.51
TNFAIP3-208ENST00000615468 MED4Q9NPJ6 270 aa11.87□□□□□ -0.51
TNFAIP3-208ENST00000615468 PCDHA7Q9UN72 937 aa11.87□□□□□ -0.51
TNFAIP3-208ENST00000615468 TAF6LQ9Y6J9 622 aa11.87□□□□□ -0.51
TNFAIP3-208ENST00000615468 VSNL1P62760 191 aa11.86□□□□□ -0.51
TNFAIP3-208ENST00000615468 ATP2B2Q01814 1243 aa11.86□□□□□ -0.51
TNFAIP3-208ENST00000615468 BOLA2Q9H3K6 86 aa11.86□□□□□ -0.51
TNFAIP3-208ENST00000615468 PNPLA6Q8IY17 1366 aa11.86□□□□□ -0.51
TNFAIP3-208ENST00000615468 TTC19Q6DKK2 380 aaPredicted RBP11.86□□□□□ -0.51
TNFAIP3-208ENST00000615468 SYNE3Q6ZMZ3 975 aa11.86□□□□□ -0.51
TNFAIP3-208ENST00000615468 KAT2BQ92831 832 aa11.86□□□□□ -0.51
TNFAIP3-208ENST00000615468 USP44Q9H0E7 712 aa11.86□□□□□ -0.51
TNFAIP3-208ENST00000615468 SAMM50Q9Y512 469 aa11.86□□□□□ -0.51
TNFAIP3-208ENST00000615468 SETD1BQ9UPS6 1966 aaKnown RBP11.86□□□□□ -0.51
TNFAIP3-208ENST00000615468 EXOC5O00471 708 aa11.86□□□□□ -0.51
TNFAIP3-208ENST00000615468 CALRP27797 417 aaKnown RBP11.86□□□□□ -0.51
TNFAIP3-208ENST00000615468 GSCP56915 257 aaPredicted RBP11.86□□□□□ -0.51
TNFAIP3-208ENST00000615468 TOB2Q14106 344 aaPredicted RBP11.86□□□□□ -0.51
TNFAIP3-208ENST00000615468 HSP90AB4PQ58FF6 505 aa11.86□□□□□ -0.51
TNFAIP3-208ENST00000615468 BCAS4Q8TDM0 211 aa11.86□□□□□ -0.51
TNFAIP3-208ENST00000615468 RIN2Q8WYP3 895 aaPredicted RBP11.86□□□□□ -0.51
TNFAIP3-208ENST00000615468 FANCLQ9NW38 375 aa11.86□□□□□ -0.51
TNFAIP3-208ENST00000615468 L1RE1Q9UN81 338 aa11.86□□□□□ -0.51
TNFAIP3-208ENST00000615468 CUTAO60888 179 aa11.85□□□□□ -0.51
TNFAIP3-208ENST00000615468 TFRCP02786 760 aaKnown RBP11.85□□□□□ -0.51
TNFAIP3-208ENST00000615468 NLRP12P59046 1061 aa11.85□□□□□ -0.51
TNFAIP3-208ENST00000615468 ZNF530Q6P9A1 599 aaPredicted RBP11.85□□□□□ -0.51
TNFAIP3-208ENST00000615468 CEP57Q86XR8 500 aa11.85□□□□□ -0.51
TNFAIP3-208ENST00000615468 CCDC175P0C221 793 aa11.85□□□□□ -0.51
TNFAIP3-208ENST00000615468 TEFQ10587 303 aa11.85□□□□□ -0.51
TNFAIP3-208ENST00000615468 DLC1Q96QB1 1528 aa11.85□□□□□ -0.51
TNFAIP3-208ENST00000615468 RPS6KA5O75582 802 aa11.85□□□□□ -0.51
TNFAIP3-208ENST00000615468 OTUD7BQ6GQQ9 843 aa11.85□□□□□ -0.51
TNFAIP3-208ENST00000615468 EVI5LQ96CN4 794 aa11.85□□□□□ -0.51
TNFAIP3-208ENST00000615468 CCDC8Q9H0W5 538 aaPredicted RBP11.85□□□□□ -0.51
TNFAIP3-208ENST00000615468 FLT4P35916 1363 aa11.84□□□□□ -0.51
TNFAIP3-208ENST00000615468 FRMD3A2A2Y4 597 aa11.84□□□□□ -0.51
TNFAIP3-208ENST00000615468 MYL5Q02045 173 aa11.84□□□□□ -0.51
TNFAIP3-208ENST00000615468 RNF187Q5TA31 235 aaPredicted RBP11.84□□□□□ -0.51
TNFAIP3-208ENST00000615468 OTUD6BQ8N6M0 293 aa11.84□□□□□ -0.51
TNFAIP3-208ENST00000615468 NEK1Q96PY6 1258 aa11.84□□□□□ -0.51
TNFAIP3-208ENST00000615468 SEC62Q99442 399 aaKnown RBP11.84□□□□□ -0.51
TNFAIP3-208ENST00000615468 ANKZF1Q9H8Y5 726 aa11.84□□□□□ -0.51
TNFAIP3-208ENST00000615468 CDC23Q9UJX2 597 aa11.84□□□□□ -0.51
TNFAIP3-208ENST00000615468 CCDC9Q9Y3X0 531 aaKnown RBP11.84□□□□□ -0.51
TNFAIP3-208ENST00000615468 NRXN3Q9Y4C0 1643 aa11.84□□□□□ -0.51
TNFAIP3-208ENST00000615468 GIGYF1O75420 1035 aaPredicted RBP11.84□□□□□ -0.51
TNFAIP3-208ENST00000615468 ZNF202O95125 648 aa11.84□□□□□ -0.51
TNFAIP3-208ENST00000615468 GCP02774 474 aa11.84□□□□□ -0.51
TNFAIP3-208ENST00000615468 FAM76AQ8TAV0 307 aa11.84□□□□□ -0.51
TNFAIP3-208ENST00000615468 SSH3Q8TE77 659 aa11.84□□□□□ -0.51
TNFAIP3-208ENST00000615468 N4BP2L2Q92802 583 aaPredicted RBP11.84□□□□□ -0.51
TNFAIP3-208ENST00000615468 CLIC6Q96NY7 704 aa11.84□□□□□ -0.51
TNFAIP3-208ENST00000615468 NCOA5Q9HCD5 579 aaKnown RBP11.84□□□□□ -0.51
TNFAIP3-208ENST00000615468 CTAGE9A4FU28 777 aa11.84□□□□□ -0.51
TNFAIP3-208ENST00000615468 GNAT3A8MTJ3 354 aa11.84□□□□□ -0.51
TNFAIP3-208ENST00000615468 ENGASEQ8NFI3 743 aa11.84□□□□□ -0.51
TNFAIP3-208ENST00000615468 HINFPQ9BQA5 517 aa11.84□□□□□ -0.51
TNFAIP3-208ENST00000615468 PTPDC1A2A3K4 754 aa11.83□□□□□ -0.52
TNFAIP3-208ENST00000615468 MARCKSP29966 332 aaPredicted RBP11.83□□□□□ -0.52
TNFAIP3-208ENST00000615468 BIRC2Q13490 618 aa11.83□□□□□ -0.52
TNFAIP3-208ENST00000615468 MTF1Q14872 753 aa11.83□□□□□ -0.52
TNFAIP3-208ENST00000615468 IGSF22Q8N9C0 903 aa11.83□□□□□ -0.52
TNFAIP3-208ENST00000615468 MAP4K1Q92918 833 aa11.83□□□□□ -0.52
TNFAIP3-208ENST00000615468 LGR6Q9HBX8 967 aa11.83□□□□□ -0.52
TNFAIP3-208ENST00000615468 UBR1Q8IWV7 1749 aa11.83□□□□□ -0.52
TNFAIP3-208ENST00000615468 LRRIQ3A6PVS8 624 aaPredicted RBP11.83□□□□□ -0.52
TNFAIP3-208ENST00000615468 FCHSD1Q86WN1 690 aa11.83□□□□□ -0.52
TNFAIP3-208ENST00000615468 POTEDQ86YR6 584 aa11.83□□□□□ -0.52
TNFAIP3-208ENST00000615468 VSTM4Q8IW00 320 aa11.83□□□□□ -0.52
TNFAIP3-208ENST00000615468 FMR1NBQ8N0W7 255 aaPredicted RBP11.83□□□□□ -0.52
TNFAIP3-208ENST00000615468 CCDC148Q8NFR7 591 aa11.83□□□□□ -0.52
TNFAIP3-208ENST00000615468 CABS1Q96KC9 395 aa11.83□□□□□ -0.52
TNFAIP3-208ENST00000615468 PA2G4Q9UQ80 394 aaKnown RBP11.83□□□□□ -0.52
TNFAIP3-208ENST00000615468 RIMS1Q86UR5 1692 aaKnown RBP11.82□□□□□ -0.52
TNFAIP3-208ENST00000615468 A0A0D9SFI3 127 aa11.82□□□□□ -0.52
TNFAIP3-208ENST00000615468 ZMYND10O75800 440 aa11.82□□□□□ -0.52
TNFAIP3-208ENST00000615468 CDR1P51861 262 aa11.82□□□□□ -0.52
TNFAIP3-208ENST00000615468 HNRNPLLQ8WVV9 542 aaKnown RBP11.82□□□□□ -0.52
TNFAIP3-208ENST00000615468 VEZTQ9HBM0 779 aa11.82□□□□□ -0.52
TNFAIP3-208ENST00000615468 GOLGA6CA6NDK9 693 aa11.82□□□□□ -0.52
TNFAIP3-208ENST00000615468 HIP1O00291 1037 aa11.82□□□□□ -0.52
TNFAIP3-208ENST00000615468 CPP00450 1065 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms