RNA–Protein interactions for RNA: ENST00000615442.1

PVT1-223, Transcript of Pvt1 oncogene, humanhuman

Gene PVT1, Length 165 nt, Biotype misc RNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-223ENST00000615442 MYOZ2Q9NPC6 264 aa12.78□□□□□ -0.36
PVT1-223ENST00000615442 PAG1Q9NWQ8 432 aa12.78□□□□□ -0.36
PVT1-223ENST00000615442 LRP2BPQ9P2M1 347 aa12.78□□□□□ -0.36
PVT1-223ENST00000615442 AOX1Q06278 1338 aa12.78□□□□□ -0.36
PVT1-223ENST00000615442 SCN9AQ15858 1988 aa12.78□□□□□ -0.36
PVT1-223ENST00000615442 SHTN1A0MZ66 631 aa12.77□□□□□ -0.37
PVT1-223ENST00000615442 PRDX5P30044 214 aa12.77□□□□□ -0.37
PVT1-223ENST00000615442 HHIPL2Q6UWX4 724 aa12.77□□□□□ -0.37
PVT1-223ENST00000615442 SAMD7Q7Z3H4 446 aa12.77□□□□□ -0.37
PVT1-223ENST00000615442 SLF2Q8IX21 1173 aa12.77□□□□□ -0.37
PVT1-223ENST00000615442 TEKT1Q969V4 418 aa12.77□□□□□ -0.37
PVT1-223ENST00000615442 DNAJC2Q99543 621 aaKnown RBP12.77□□□□□ -0.37
PVT1-223ENST00000615442 ANTXR1Q9H6X2 564 aa12.77□□□□□ -0.37
PVT1-223ENST00000615442 PIH1D3Q9NQM4 214 aaKnown RBP12.77□□□□□ -0.37
PVT1-223ENST00000615442 RAI14Q9P0K7 980 aa12.77□□□□□ -0.37
PVT1-223ENST00000615442 UTRNP46939 3433 aa12.76□□□□□ -0.37
PVT1-223ENST00000615442 GOLIM4O00461 696 aa12.76□□□□□ -0.37
PVT1-223ENST00000615442 LDHCP07864 332 aa12.76□□□□□ -0.37
PVT1-223ENST00000615442 PDE4AP27815 886 aa12.76□□□□□ -0.37
PVT1-223ENST00000615442 CRKP46108 304 aa12.76□□□□□ -0.37
PVT1-223ENST00000615442 GSTO1P78417 241 aa12.76□□□□□ -0.37
PVT1-223ENST00000615442 MECOMQ03112 1051 aa12.76□□□□□ -0.37
PVT1-223ENST00000615442 MAP3K12Q12852 859 aa12.76□□□□□ -0.37
PVT1-223ENST00000615442 DLGAP5Q15398 846 aa12.76□□□□□ -0.37
PVT1-223ENST00000615442 KIF4BQ2VIQ3 1234 aa12.76□□□□□ -0.37
PVT1-223ENST00000615442 CFAP100Q494V2 611 aa12.76□□□□□ -0.37
PVT1-223ENST00000615442 RBM26Q5T8P6 1007 aaKnown RBP12.76□□□□□ -0.37
PVT1-223ENST00000615442 TSHZ3Q63HK5 1081 aa12.76□□□□□ -0.37
PVT1-223ENST00000615442 DZIP1Q86YF9 867 aaKnown RBP12.76□□□□□ -0.37
PVT1-223ENST00000615442 ZC3H15Q8WU90 426 aaKnown RBP12.76□□□□□ -0.37
PVT1-223ENST00000615442 NSUN4Q96CB9 384 aaKnown RBP12.76□□□□□ -0.37
PVT1-223ENST00000615442 FAM163AQ96GL9 167 aaPredicted RBP12.76□□□□□ -0.37
PVT1-223ENST00000615442 ZBED3Q96IU2 234 aaPredicted RBP12.76□□□□□ -0.37
PVT1-223ENST00000615442 NDUFB9Q9Y6M9 179 aa12.76□□□□□ -0.37
PVT1-223ENST00000615442 PSME4Q14997 1843 aa12.76□□□□□ -0.37
PVT1-223ENST00000615442 KIF3CO14782 793 aa12.75□□□□□ -0.37
PVT1-223ENST00000615442 RBM5P52756 815 aaKnown RBP eCLIP12.75□□□□□ -0.37
PVT1-223ENST00000615442 HIRAP54198 1017 aaPredicted RBP12.75□□□□□ -0.37
PVT1-223ENST00000615442 TBC1D10BQ4KMP7 808 aaPredicted RBP12.75□□□□□ -0.37
PVT1-223ENST00000615442 ZDHHC15Q96MV8 337 aa12.75□□□□□ -0.37
PVT1-223ENST00000615442 PGAP2Q9UHJ9 254 aa12.75□□□□□ -0.37
PVT1-223ENST00000615442 ZNF646O15015 1829 aaPredicted RBP12.74□□□□□ -0.37
PVT1-223ENST00000615442 WNT10BO00744 389 aa12.74□□□□□ -0.37
PVT1-223ENST00000615442 IDH1O75874 414 aaKnown RBP12.74□□□□□ -0.37
PVT1-223ENST00000615442 EGFRP00533 1210 aa12.74□□□□□ -0.37
PVT1-223ENST00000615442 NAA16Q6N069 864 aaPredicted RBP12.74□□□□□ -0.37
PVT1-223ENST00000615442 ZSCAN25Q6NSZ9 544 aa12.74□□□□□ -0.37
PVT1-223ENST00000615442 LDHDQ86WU2 507 aa12.74□□□□□ -0.37
PVT1-223ENST00000615442 TICAM2Q86XR7 235 aa12.74□□□□□ -0.37
PVT1-223ENST00000615442 TRPM4Q8TD43 1214 aa12.74□□□□□ -0.37
PVT1-223ENST00000615442 EVI5LQ96CN4 794 aa12.74□□□□□ -0.37
PVT1-223ENST00000615442 PRMT6Q96LA8 375 aaPredicted RBP12.74□□□□□ -0.37
PVT1-223ENST00000615442 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.74□□□□□ -0.37
PVT1-223ENST00000615442 SCN4AP35499 1836 aa12.74□□□□□ -0.37
PVT1-223ENST00000615442 GAKO14976 1311 aa12.73□□□□□ -0.37
PVT1-223ENST00000615442 SPDYE2BA6NHP3 402 aa12.73□□□□□ -0.37
PVT1-223ENST00000615442 MYO1BO43795 1136 aa12.73□□□□□ -0.37
PVT1-223ENST00000615442 SPDYE6P0CI01 402 aa12.73□□□□□ -0.37
PVT1-223ENST00000615442 DIXDC1Q155Q3 683 aa12.73□□□□□ -0.37
PVT1-223ENST00000615442 LRRFIP1Q32MZ4 808 aaKnown RBP12.73□□□□□ -0.37
PVT1-223ENST00000615442 NBPF9Q3BBW0 867 aa12.73□□□□□ -0.37
PVT1-223ENST00000615442 EAPPQ56P03 285 aaPredicted RBP12.73□□□□□ -0.37
PVT1-223ENST00000615442 APOBEC3HQ6NTF7 200 aaKnown RBP12.73□□□□□ -0.37
PVT1-223ENST00000615442 KBTBD3Q8NAB2 608 aa12.73□□□□□ -0.37
PVT1-223ENST00000615442 ZNF384Q8TF68 577 aa12.73□□□□□ -0.37
PVT1-223ENST00000615442 EDC3Q96F86 508 aaKnown RBP12.73□□□□□ -0.37
PVT1-223ENST00000615442 MROH7-TTC4A0A0A0MT08 1334 aa12.72□□□□□ -0.37
PVT1-223ENST00000615442 GPR75-ASB3A0A0A6YYF3 556 aa12.72□□□□□ -0.37
PVT1-223ENST00000615442 TOMM70O94826 608 aa12.72□□□□□ -0.37
PVT1-223ENST00000615442 MAP4K4O95819 1239 aaPredicted RBP12.72□□□□□ -0.37
PVT1-223ENST00000615442 UBE3CQ15386 1083 aa12.72□□□□□ -0.37
PVT1-223ENST00000615442 SLC9C2Q5TAH2 1124 aa12.72□□□□□ -0.37
PVT1-223ENST00000615442 MAGEB6Q8N7X4 407 aa12.72□□□□□ -0.37
PVT1-223ENST00000615442 CLEC11AQ9Y240 323 aa12.72□□□□□ -0.37
PVT1-223ENST00000615442 DAGLAQ9Y4D2 1042 aa12.72□□□□□ -0.37
PVT1-223ENST00000615442 BAG3O95817 575 aa12.71□□□□□ -0.37
PVT1-223ENST00000615442 ZFYP08048 801 aaPredicted RBP12.71□□□□□ -0.37
PVT1-223ENST00000615442 PDE6AP16499 860 aa12.71□□□□□ -0.37
PVT1-223ENST00000615442 CYP7A1P22680 504 aa12.71□□□□□ -0.37
PVT1-223ENST00000615442 PPP4CP60510 307 aa12.71□□□□□ -0.37
PVT1-223ENST00000615442 TTC22Q5TAA0 569 aa12.71□□□□□ -0.37
PVT1-223ENST00000615442 CHADLQ6NUI6 762 aa12.71□□□□□ -0.37
PVT1-223ENST00000615442 CERS3Q8IU89 383 aa12.71□□□□□ -0.37
PVT1-223ENST00000615442 CNTROBQ8N137 903 aa12.71□□□□□ -0.37
PVT1-223ENST00000615442 DCPSQ96C86 337 aaKnown RBP12.71□□□□□ -0.37
PVT1-223ENST00000615442 NOL10Q9BSC4 688 aaKnown RBP12.71□□□□□ -0.37
PVT1-223ENST00000615442 PCDHAC2Q9Y5I4 1007 aa12.71□□□□□ -0.37
PVT1-223ENST00000615442 AKAP11Q9UKA4 1901 aa12.7□□□□□ -0.38
PVT1-223ENST00000615442 PITPNM2Q9BZ72 1349 aa12.7□□□□□ -0.38
PVT1-223ENST00000615442 TRIM6-TRIM34B2RNG4 842 aa12.7□□□□□ -0.38
PVT1-223ENST00000615442 RNF113AO15541 343 aaKnown RBP12.7□□□□□ -0.38
PVT1-223ENST00000615442 POTEIP0CG38 1075 aa12.7□□□□□ -0.38
PVT1-223ENST00000615442 POTEJP0CG39 1038 aa12.7□□□□□ -0.38
PVT1-223ENST00000615442 ADD2P35612 726 aa12.7□□□□□ -0.38
PVT1-223ENST00000615442 BTDP43251 543 aa12.7□□□□□ -0.38
PVT1-223ENST00000615442 SPDYE2Q495Y8 402 aa12.7□□□□□ -0.38
PVT1-223ENST00000615442 ANGEL2Q5VTE6 544 aaKnown RBP12.7□□□□□ -0.38
PVT1-223ENST00000615442 SMC1BQ8NDV3 1235 aa12.7□□□□□ -0.38
PVT1-223ENST00000615442 RBM46Q8TBY0 533 aaKnown RBP12.7□□□□□ -0.38
PVT1-223ENST00000615442 FSD1Q9BTV5 496 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms