RNA–Protein interactions for RNA: ENST00000615065.1

PRKN-211, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-211ENST00000615065 SUPT20HL1Q3ZLR7 823 aa18.52■□□□□ 0.56
PRKN-211ENST00000615065 TBC1D22AQ8WUA7 517 aa18.52■□□□□ 0.56
PRKN-211ENST00000615065 MEIS3Q99687 375 aa18.52■□□□□ 0.56
PRKN-211ENST00000615065 LRRFIP2Q9Y608 721 aaKnown RBP18.52■□□□□ 0.56
PRKN-211ENST00000615065 TBC1D8O95759 1140 aa18.51■□□□□ 0.55
PRKN-211ENST00000615065 SLC5A1P13866 664 aa18.51■□□□□ 0.55
PRKN-211ENST00000615065 SREBF2Q12772 1141 aa18.51■□□□□ 0.55
PRKN-211ENST00000615065 TNFAIP1Q13829 316 aa18.51■□□□□ 0.55
PRKN-211ENST00000615065 CDAN1Q8IWY9 1227 aa18.51■□□□□ 0.55
PRKN-211ENST00000615065 LPIN2Q92539 896 aa18.51■□□□□ 0.55
PRKN-211ENST00000615065 SLC10A4Q96EP9 437 aa18.51■□□□□ 0.55
PRKN-211ENST00000615065 TCP10L2B9ZVM9 353 aa18.5■□□□□ 0.55
PRKN-211ENST00000615065 USP2O75604 605 aaPredicted RBP18.49■□□□□ 0.55
PRKN-211ENST00000615065 CIAO1O76071 339 aa18.49■□□□□ 0.55
PRKN-211ENST00000615065 IREB2P48200 963 aaKnown RBP18.49■□□□□ 0.55
PRKN-211ENST00000615065 HDLBPQ00341 1268 aaKnown RBP18.49■□□□□ 0.55
PRKN-211ENST00000615065 TEKT1Q969V4 418 aa18.49■□□□□ 0.55
PRKN-211ENST00000615065 WNK4Q96J92 1243 aa18.49■□□□□ 0.55
PRKN-211ENST00000615065 TEPSINQ96N21 525 aa18.49■□□□□ 0.55
PRKN-211ENST00000615065 TMEM39BQ9GZU3 492 aa18.49■□□□□ 0.55
PRKN-211ENST00000615065 PA2G4Q9UQ80 394 aaKnown RBP18.49■□□□□ 0.55
PRKN-211ENST00000615065 ZNF296Q8WUU4 475 aaPredicted RBP18.48■□□□□ 0.55
PRKN-211ENST00000615065 ARHGAP45Q92619 1136 aa18.48■□□□□ 0.55
PRKN-211ENST00000615065 FBXO3Q9UK99 471 aa18.48■□□□□ 0.55
PRKN-211ENST00000615065 ZBTB48P10074 688 aaPredicted RBP18.47■□□□□ 0.55
PRKN-211ENST00000615065 GJA5P36382 358 aa18.47■□□□□ 0.55
PRKN-211ENST00000615065 CACNB3P54284 484 aa18.47■□□□□ 0.55
PRKN-211ENST00000615065 ATP2B3Q16720 1220 aa18.47■□□□□ 0.55
PRKN-211ENST00000615065 INTS3Q68E01 1043 aaKnown RBP18.47■□□□□ 0.55
PRKN-211ENST00000615065 CTU1Q7Z7A3 348 aaKnown RBP18.47■□□□□ 0.55
PRKN-211ENST00000615065 ZDHHC15Q96MV8 337 aa18.47■□□□□ 0.55
PRKN-211ENST00000615065 R3HDMLQ9H3Y0 253 aa18.47■□□□□ 0.55
PRKN-211ENST00000615065 CEP126Q9P2H0 1117 aa18.47■□□□□ 0.55
PRKN-211ENST00000615065 TNNQ9UQP3 1299 aa18.47■□□□□ 0.55
PRKN-211ENST00000615065 SUGT1Q9Y2Z0 365 aa18.47■□□□□ 0.55
PRKN-211ENST00000615065 MANSC4A6NHS7 340 aaPredicted RBP18.46■□□□□ 0.55
PRKN-211ENST00000615065 UNCXA6NJT0 531 aa18.46■□□□□ 0.55
PRKN-211ENST00000615065 TNNI2P48788 182 aa18.46■□□□□ 0.55
PRKN-211ENST00000615065 ANKRD13AQ8IZ07 590 aa18.46■□□□□ 0.55
PRKN-211ENST00000615065 HDAC5Q9UQL6 1122 aa18.46■□□□□ 0.55
PRKN-211ENST00000615065 MAST3O60307 1309 aa18.46■□□□□ 0.55
PRKN-211ENST00000615065 GPR25O00155 361 aa18.45■□□□□ 0.54
PRKN-211ENST00000615065 BCAR3O75815 825 aa18.45■□□□□ 0.54
PRKN-211ENST00000615065 TRIM27P14373 513 aa18.45■□□□□ 0.54
PRKN-211ENST00000615065 IL15P40933 162 aaPredicted RBP18.45■□□□□ 0.54
PRKN-211ENST00000615065 APOBEC3HQ6NTF7 200 aaKnown RBP18.45■□□□□ 0.54
PRKN-211ENST00000615065 WDR66Q8TBY9 1149 aa18.45■□□□□ 0.54
PRKN-211ENST00000615065 MRIQ9BWK5 157 aa18.45■□□□□ 0.54
PRKN-211ENST00000615065 CFHR5Q9BXR6 569 aa18.45■□□□□ 0.54
PRKN-211ENST00000615065 COPRSQ9NQ92 184 aa18.45■□□□□ 0.54
PRKN-211ENST00000615065 IGF2BP3O00425 579 aaKnown RBP eCLIP18.44■□□□□ 0.54
PRKN-211ENST00000615065 GNAI3P08754 354 aa18.44■□□□□ 0.54
PRKN-211ENST00000615065 NOM1Q5C9Z4 860 aaKnown RBP18.44■□□□□ 0.54
PRKN-211ENST00000615065 IFNL1Q8IU54 200 aa18.44■□□□□ 0.54
PRKN-211ENST00000615065 ELP3Q9H9T3 547 aa18.44■□□□□ 0.54
PRKN-211ENST00000615065 ADORA1P30542 326 aa18.43■□□□□ 0.54
PRKN-211ENST00000615065 PHKA1P46020 1223 aa18.43■□□□□ 0.54
PRKN-211ENST00000615065 RGS19P49795 217 aa18.43■□□□□ 0.54
PRKN-211ENST00000615065 INHBEP58166 350 aa18.43■□□□□ 0.54
PRKN-211ENST00000615065 HHIPL2Q6UWX4 724 aa18.43■□□□□ 0.54
PRKN-211ENST00000615065 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.43■□□□□ 0.54
PRKN-211ENST00000615065 MIER1Q8N108 512 aa18.43■□□□□ 0.54
PRKN-211ENST00000615065 FRAT1Q92837 279 aaPredicted RBP18.43■□□□□ 0.54
PRKN-211ENST00000615065 TMOD2Q9NZR1 351 aa18.43■□□□□ 0.54
PRKN-211ENST00000615065 IPO8O15397 1037 aaKnown RBP18.42■□□□□ 0.54
PRKN-211ENST00000615065 SRGAP3O43295 1099 aa18.42■□□□□ 0.54
PRKN-211ENST00000615065 ALDH1A1P00352 501 aa18.42■□□□□ 0.54
PRKN-211ENST00000615065 PRDX5P30044 214 aa18.42■□□□□ 0.54
PRKN-211ENST00000615065 ATF7IPQ6VMQ6 1270 aa18.42■□□□□ 0.54
PRKN-211ENST00000615065 CNKSR2Q8WXI2 1034 aa18.42■□□□□ 0.54
PRKN-211ENST00000615065 OPTNQ96CV9 577 aa18.42■□□□□ 0.54
PRKN-211ENST00000615065 GNL3LQ9NVN8 582 aaKnown RBP18.42■□□□□ 0.54
PRKN-211ENST00000615065 MYH2Q9UKX2 1941 aa18.41■□□□□ 0.54
PRKN-211ENST00000615065 FKTNO75072 461 aa18.41■□□□□ 0.54
PRKN-211ENST00000615065 MTX1Q13505 466 aa18.41■□□□□ 0.54
PRKN-211ENST00000615065 VGLL4Q14135 290 aa18.41■□□□□ 0.54
PRKN-211ENST00000615065 DIXDC1Q155Q3 683 aa18.41■□□□□ 0.54
PRKN-211ENST00000615065 FAM83AQ86UY5 434 aa18.41■□□□□ 0.54
PRKN-211ENST00000615065 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.41■□□□□ 0.54
PRKN-211ENST00000615065 CLUAP1Q96AJ1 413 aa18.41■□□□□ 0.54
PRKN-211ENST00000615065 DAGLAQ9Y4D2 1042 aa18.41■□□□□ 0.54
PRKN-211ENST00000615065 AK9Q5TCS8 1911 aa18.41■□□□□ 0.54
PRKN-211ENST00000615065 MAP3K9P80192 1104 aa18.4■□□□□ 0.54
PRKN-211ENST00000615065 HNRNPUQ00839 825 aaKnown RBP eCLIP18.4■□□□□ 0.54
PRKN-211ENST00000615065 MLLT1Q03111 559 aaPredicted RBP18.4■□□□□ 0.54
PRKN-211ENST00000615065 FKBP1CQ5VVH2 108 aa18.4■□□□□ 0.54
PRKN-211ENST00000615065 DENND2AQ9ULE3 1009 aa18.4■□□□□ 0.54
PRKN-211ENST00000615065 RPAP1Q9BWH6 1393 aaPredicted RBP18.4■□□□□ 0.54
PRKN-211ENST00000615065 LDHBP07195 334 aaKnown RBP18.39■□□□□ 0.53
PRKN-211ENST00000615065 TIMM10P62072 90 aa18.39■□□□□ 0.53
PRKN-211ENST00000615065 TFCP2Q12800 502 aa18.39■□□□□ 0.53
PRKN-211ENST00000615065 CCDC102BQ68D86 513 aa18.39■□□□□ 0.53
PRKN-211ENST00000615065 PTPN18Q99952 460 aa18.39■□□□□ 0.53
PRKN-211ENST00000615065 HPS5Q9UPZ3 1129 aa18.39■□□□□ 0.53
PRKN-211ENST00000615065 CSADQ9Y600 493 aa18.39■□□□□ 0.53
PRKN-211ENST00000615065 SALL1Q9NSC2 1324 aa18.39■□□□□ 0.53
PRKN-211ENST00000615065 TESPA1A2RU30 521 aaPredicted RBP18.38■□□□□ 0.53
PRKN-211ENST00000615065 SEMA3EO15041 775 aa18.38■□□□□ 0.53
PRKN-211ENST00000615065 SOX10P56693 466 aa18.38■□□□□ 0.53
PRKN-211ENST00000615065 PKN2Q16513 984 aaKnown RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms