RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 ABCF2Q9UG63 623 aa7.07□□□□□ -1.28
CPNE3-208ENST00000614678 CIAO1O76071 339 aa7.07□□□□□ -1.28
CPNE3-208ENST00000614678 RRP1P56182 461 aaKnown RBP7.07□□□□□ -1.28
CPNE3-208ENST00000614678 SLC4A8Q2Y0W8 1093 aa7.07□□□□□ -1.28
CPNE3-208ENST00000614678 NBPF12Q5TAG4 269 aaPredicted RBP7.07□□□□□ -1.28
CPNE3-208ENST00000614678 ADGRA1Q86SQ6 560 aa7.07□□□□□ -1.28
CPNE3-208ENST00000614678 OTUD7AQ8TE49 926 aaPredicted RBP7.07□□□□□ -1.28
CPNE3-208ENST00000614678 SPDYE2BA6NHP3 402 aa7.06□□□□□ -1.28
CPNE3-208ENST00000614678 SPDYE6P0CI01 402 aa7.06□□□□□ -1.28
CPNE3-208ENST00000614678 RPS12P25398 132 aaKnown RBP7.06□□□□□ -1.28
CPNE3-208ENST00000614678 EVX2Q03828 476 aa7.06□□□□□ -1.28
CPNE3-208ENST00000614678 CNKSR2Q8WXI2 1034 aa7.06□□□□□ -1.28
CPNE3-208ENST00000614678 CREBZFQ9NS37 354 aa7.06□□□□□ -1.28
CPNE3-208ENST00000614678 HMG20BQ9P0W2 317 aa7.06□□□□□ -1.28
CPNE3-208ENST00000614678 ZNF609O15014 1411 aa7.06□□□□□ -1.28
CPNE3-208ENST00000614678 TRPM7Q96QT4 1865 aa7.06□□□□□ -1.28
CPNE3-208ENST00000614678 AKAP11Q9UKA4 1901 aa7.06□□□□□ -1.28
CPNE3-208ENST00000614678 CRKP46108 304 aa7.06□□□□□ -1.28
CPNE3-208ENST00000614678 OS9Q13438 667 aaPredicted RBP7.06□□□□□ -1.28
CPNE3-208ENST00000614678 TNNI3KQ59H18 835 aa7.06□□□□□ -1.28
CPNE3-208ENST00000614678 CAVIN4Q5BKX8 364 aa7.06□□□□□ -1.28
CPNE3-208ENST00000614678 CDC37L1Q7L3B6 337 aa7.06□□□□□ -1.28
CPNE3-208ENST00000614678 OGFOD1Q8N543 542 aa7.06□□□□□ -1.28
CPNE3-208ENST00000614678 CLMNQ96JQ2 1002 aa7.06□□□□□ -1.28
CPNE3-208ENST00000614678 FPGT-TNNI3KV9GXZ4 949 aa7.06□□□□□ -1.28
CPNE3-208ENST00000614678 FAM205AQ6ZU69 1335 aa7.06□□□□□ -1.28
CPNE3-208ENST00000614678 IFIT1P09914 478 aaKnown RBP7.06□□□□□ -1.28
CPNE3-208ENST00000614678 SLC5A1P13866 664 aa7.06□□□□□ -1.28
CPNE3-208ENST00000614678 TCP10Q12799 353 aa7.06□□□□□ -1.28
CPNE3-208ENST00000614678 APOBEC3HQ6NTF7 200 aaKnown RBP7.06□□□□□ -1.28
CPNE3-208ENST00000614678 SKAP1Q86WV1 359 aa7.06□□□□□ -1.28
CPNE3-208ENST00000614678 DCPSQ96C86 337 aaKnown RBP7.06□□□□□ -1.28
CPNE3-208ENST00000614678 G3BP1Q13283 466 aaKnown RBP eCLIP7.06□□□□□ -1.28
CPNE3-208ENST00000614678 EXOC6Q8TAG9 804 aa7.06□□□□□ -1.28
CPNE3-208ENST00000614678 DEFB129Q9H1M3 183 aa7.06□□□□□ -1.28
CPNE3-208ENST00000614678 SMIM22K7EJ46 135 aa7.05□□□□□ -1.28
CPNE3-208ENST00000614678 DLGAP5Q15398 846 aa7.05□□□□□ -1.28
CPNE3-208ENST00000614678 COL13A1Q5TAT6 717 aaPredicted RBP7.05□□□□□ -1.28
CPNE3-208ENST00000614678 FAM196BA6NMK8 535 aa7.05□□□□□ -1.28
CPNE3-208ENST00000614678 ZAP70P43403 619 aa7.05□□□□□ -1.28
CPNE3-208ENST00000614678 HUNKP57058 714 aa7.05□□□□□ -1.28
CPNE3-208ENST00000614678 SULF1Q8IWU6 871 aa7.05□□□□□ -1.28
CPNE3-208ENST00000614678 DNAH12Q6ZR08 3092 aa7.05□□□□□ -1.28
CPNE3-208ENST00000614678 CYP2E1P05181 493 aaPredicted RBP7.05□□□□□ -1.28
CPNE3-208ENST00000614678 SHROOM1Q2M3G4 852 aaPredicted RBP7.05□□□□□ -1.28
CPNE3-208ENST00000614678 DEFB115Q30KQ5 88 aa7.05□□□□□ -1.28
CPNE3-208ENST00000614678 MIGA2Q7L4E1 593 aa7.05□□□□□ -1.28
CPNE3-208ENST00000614678 PIH1D3Q9NQM4 214 aaKnown RBP7.05□□□□□ -1.28
CPNE3-208ENST00000614678 ZNF70Q9UC06 446 aaPredicted RBP7.05□□□□□ -1.28
CPNE3-208ENST00000614678 CNTNAP1P78357 1384 aa7.05□□□□□ -1.28
CPNE3-208ENST00000614678 MYH2Q9UKX2 1941 aa7.04□□□□□ -1.28
CPNE3-208ENST00000614678 RASA3Q14644 834 aa7.04□□□□□ -1.28
CPNE3-208ENST00000614678 AACSQ86V21 672 aa7.04□□□□□ -1.28
CPNE3-208ENST00000614678 DDX4Q9NQI0 724 aaKnown RBP7.04□□□□□ -1.28
CPNE3-208ENST00000614678 DAGLAQ9Y4D2 1042 aa7.04□□□□□ -1.28
CPNE3-208ENST00000614678 ARAP2Q8WZ64 1704 aa7.04□□□□□ -1.28
CPNE3-208ENST00000614678 RHPN1Q8TCX5 695 aa7.04□□□□□ -1.28
CPNE3-208ENST00000614678 CAPNS2Q96L46 248 aa7.04□□□□□ -1.28
CPNE3-208ENST00000614678 TEPSINQ96N21 525 aa7.04□□□□□ -1.28
CPNE3-208ENST00000614678 DDX19BQ9UMR2 479 aa7.04□□□□□ -1.28
CPNE3-208ENST00000614678 NOP58Q9Y2X3 529 aaKnown RBP7.04□□□□□ -1.28
CPNE3-208ENST00000614678 FAM155AB1AL88 458 aaPredicted RBP7.04□□□□□ -1.28
CPNE3-208ENST00000614678 MAP4K4O95819 1239 aaPredicted RBP7.04□□□□□ -1.28
CPNE3-208ENST00000614678 CCDC84Q86UT8 332 aaPredicted RBP7.04□□□□□ -1.28
CPNE3-208ENST00000614678 ZC3H15Q8WU90 426 aaKnown RBP7.04□□□□□ -1.28
CPNE3-208ENST00000614678 TLL2Q9Y6L7 1015 aa7.04□□□□□ -1.28
CPNE3-208ENST00000614678 WDR33Q9C0J8 1336 aaKnown RBP7.04□□□□□ -1.28
CPNE3-208ENST00000614678 FOXN1O15353 648 aa7.03□□□□□ -1.28
CPNE3-208ENST00000614678 HSPA1AP0DMV8 641 aaKnown RBP7.03□□□□□ -1.28
CPNE3-208ENST00000614678 HSPA1BP0DMV9 641 aaKnown RBP7.03□□□□□ -1.28
CPNE3-208ENST00000614678 MECOMQ03112 1051 aa7.03□□□□□ -1.28
CPNE3-208ENST00000614678 SPATA5Q8NB90 893 aa7.03□□□□□ -1.28
CPNE3-208ENST00000614678 GBA2Q9HCG7 927 aaPredicted RBP7.03□□□□□ -1.28
CPNE3-208ENST00000614678 LAMA2P24043 3122 aaKnown RBP7.03□□□□□ -1.28
CPNE3-208ENST00000614678 RASSF10A6NK89 507 aa7.03□□□□□ -1.28
CPNE3-208ENST00000614678 ECM2O94769 699 aaPredicted RBP7.03□□□□□ -1.28
CPNE3-208ENST00000614678 CDC42EP5Q6NZY7 148 aa7.03□□□□□ -1.28
CPNE3-208ENST00000614678 SH3BP5LQ7L8J4 393 aa7.03□□□□□ -1.28
CPNE3-208ENST00000614678 LAMA3Q16787 3333 aa7.03□□□□□ -1.28
CPNE3-208ENST00000614678 CASP8AP2Q9UKL3 1982 aa7.03□□□□□ -1.28
CPNE3-208ENST00000614678 IGHDP01880 384 aa7.03□□□□□ -1.28
CPNE3-208ENST00000614678 RANBP2P49792 3224 aaKnown RBP7.03□□□□□ -1.28
CPNE3-208ENST00000614678 R3HDMLQ9H3Y0 253 aa7.03□□□□□ -1.28
CPNE3-208ENST00000614678 AK9Q5TCS8 1911 aa7.03□□□□□ -1.28
CPNE3-208ENST00000614678 GJA5P36382 358 aa7.03□□□□□ -1.28
CPNE3-208ENST00000614678 DYNLL1P63167 89 aaKnown RBP7.03□□□□□ -1.28
CPNE3-208ENST00000614678 PICALMQ13492 652 aa7.03□□□□□ -1.28
CPNE3-208ENST00000614678 TTLL12Q14166 644 aaPredicted RBP7.03□□□□□ -1.28
CPNE3-208ENST00000614678 SPDYE2Q495Y8 402 aa7.03□□□□□ -1.28
CPNE3-208ENST00000614678 GORABQ5T7V8 394 aa7.03□□□□□ -1.28
CPNE3-208ENST00000614678 FAM198AQ9UFP1 575 aa7.03□□□□□ -1.28
CPNE3-208ENST00000614678 PDE3AQ14432 1141 aa7.02□□□□□ -1.29
CPNE3-208ENST00000614678 JMYQ8N9B5 988 aa7.02□□□□□ -1.29
CPNE3-208ENST00000614678 MIGA1Q8NAN2 632 aa7.02□□□□□ -1.29
CPNE3-208ENST00000614678 ZKSCAN4Q969J2 545 aaPredicted RBP7.02□□□□□ -1.29
CPNE3-208ENST00000614678 ANGEL1Q9UNK9 670 aaKnown RBP7.02□□□□□ -1.29
CPNE3-208ENST00000614678 DGKZQ13574 1117 aa7.02□□□□□ -1.29
CPNE3-208ENST00000614678 BOLA2Q9H3K6 86 aa7.02□□□□□ -1.29
CPNE3-208ENST00000614678 ECM29Q5VYK3 1845 aa7.02□□□□□ -1.29
CPNE3-208ENST00000614678 LDHBP07195 334 aaKnown RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms