RNA–Protein interactions for RNA: ENST00000614402.4

PMPCA-208, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 2

Gene PMPCA, Length 505 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-208ENST00000614402 KIF16BQ96L93 1317 aa25.58■■□□□ 1.69
PMPCA-208ENST00000614402 FGFR2P21802 821 aa25.57■■□□□ 1.68
PMPCA-208ENST00000614402 IREB2P48200 963 aaKnown RBP25.57■■□□□ 1.68
PMPCA-208ENST00000614402 INHBEP58166 350 aa25.57■■□□□ 1.68
PMPCA-208ENST00000614402 CAVIN4Q5BKX8 364 aa25.57■■□□□ 1.68
PMPCA-208ENST00000614402 IFNL1Q8IU54 200 aa25.57■■□□□ 1.68
PMPCA-208ENST00000614402 HPS5Q9UPZ3 1129 aa25.57■■□□□ 1.68
PMPCA-208ENST00000614402 ALDH1A1P00352 501 aa25.56■■□□□ 1.68
PMPCA-208ENST00000614402 GJA5P36382 358 aa25.56■■□□□ 1.68
PMPCA-208ENST00000614402 HDLBPQ00341 1268 aaKnown RBP25.56■■□□□ 1.68
PMPCA-208ENST00000614402 CDAN1Q8IWY9 1227 aa25.56■■□□□ 1.68
PMPCA-208ENST00000614402 TBC1D22AQ8WUA7 517 aa25.56■■□□□ 1.68
PMPCA-208ENST00000614402 TNRC18O15417 2968 aaPredicted RBP25.55■■□□□ 1.68
PMPCA-208ENST00000614402 BCAMP50895 628 aa25.55■■□□□ 1.68
PMPCA-208ENST00000614402 CHAF1AQ13111 956 aaPredicted RBP25.55■■□□□ 1.68
PMPCA-208ENST00000614402 PUM3Q15397 648 aaKnown RBP25.55■■□□□ 1.68
PMPCA-208ENST00000614402 ANKRD13AQ8IZ07 590 aa25.55■■□□□ 1.68
PMPCA-208ENST00000614402 SMC4Q9NTJ3 1288 aa25.55■■□□□ 1.68
PMPCA-208ENST00000614402 IGF2BP3O00425 579 aaKnown RBP eCLIP25.54■■□□□ 1.68
PMPCA-208ENST00000614402 SOX10P56693 466 aa25.54■■□□□ 1.68
PMPCA-208ENST00000614402 FKTNO75072 461 aa25.53■■□□□ 1.68
PMPCA-208ENST00000614402 TCP10L2B9ZVM9 353 aa25.52■■□□□ 1.68
PMPCA-208ENST00000614402 EYA2O00167 538 aa25.52■■□□□ 1.68
PMPCA-208ENST00000614402 CT47B1P0C2W7 299 aaPredicted RBP25.52■■□□□ 1.68
PMPCA-208ENST00000614402 TMEM39BQ9GZU3 492 aa25.52■■□□□ 1.68
PMPCA-208ENST00000614402 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.52■■□□□ 1.68
PMPCA-208ENST00000614402 FRAT2O75474 233 aaPredicted RBP25.51■■□□□ 1.67
PMPCA-208ENST00000614402 IFIT1P09914 478 aaKnown RBP25.51■■□□□ 1.67
PMPCA-208ENST00000614402 ATG9AQ7Z3C6 839 aa25.51■■□□□ 1.67
PMPCA-208ENST00000614402 TEKT1Q969V4 418 aa25.51■■□□□ 1.67
PMPCA-208ENST00000614402 ZDHHC15Q96MV8 337 aa25.51■■□□□ 1.67
PMPCA-208ENST00000614402 MRIQ9BWK5 157 aa25.51■■□□□ 1.67
PMPCA-208ENST00000614402 SUGT1Q9Y2Z0 365 aa25.51■■□□□ 1.67
PMPCA-208ENST00000614402 TESPA1A2RU30 521 aaPredicted RBP25.5■■□□□ 1.67
PMPCA-208ENST00000614402 TNNI2P48788 182 aa25.5■■□□□ 1.67
PMPCA-208ENST00000614402 FBXO46Q6PJ61 603 aaPredicted RBP25.5■■□□□ 1.67
PMPCA-208ENST00000614402 MYH13Q9UKX3 1938 aa25.49■■□□□ 1.67
PMPCA-208ENST00000614402 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.49■■□□□ 1.67
PMPCA-208ENST00000614402 LPIN2Q92539 896 aa25.49■■□□□ 1.67
PMPCA-208ENST00000614402 MAST3O60307 1309 aa25.48■■□□□ 1.67
PMPCA-208ENST00000614402 APOBEC3HQ6NTF7 200 aaKnown RBP25.48■■□□□ 1.67
PMPCA-208ENST00000614402 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.48■■□□□ 1.67
PMPCA-208ENST00000614402 OPTNQ96CV9 577 aa25.48■■□□□ 1.67
PMPCA-208ENST00000614402 PTPN18Q99952 460 aa25.48■■□□□ 1.67
PMPCA-208ENST00000614402 ELP3Q9H9T3 547 aa25.48■■□□□ 1.67
PMPCA-208ENST00000614402 NOB1Q9ULX3 412 aaKnown RBP25.48■■□□□ 1.67
PMPCA-208ENST00000614402 HTTP42858 3142 aa25.48■■□□□ 1.67
PMPCA-208ENST00000614402 UBTFL1P0CB47 393 aaPredicted RBP25.47■■□□□ 1.67
PMPCA-208ENST00000614402 SLC5A1P13866 664 aa25.47■■□□□ 1.67
PMPCA-208ENST00000614402 CACNB3P54284 484 aa25.47■■□□□ 1.67
PMPCA-208ENST00000614402 MS4A4AQ96JQ5 239 aa25.47■■□□□ 1.67
PMPCA-208ENST00000614402 FBXO3Q9UK99 471 aa25.47■■□□□ 1.67
PMPCA-208ENST00000614402 CIAO1O76071 339 aa25.46■■□□□ 1.67
PMPCA-208ENST00000614402 VGLL4Q14135 290 aa25.46■■□□□ 1.67
PMPCA-208ENST00000614402 FKBP1CQ5VVH2 108 aa25.46■■□□□ 1.67
PMPCA-208ENST00000614402 HHIPL2Q6UWX4 724 aa25.46■■□□□ 1.67
PMPCA-208ENST00000614402 CRHR2Q13324 411 aa25.45■■□□□ 1.66
PMPCA-208ENST00000614402 FAM83AQ86UY5 434 aa25.45■■□□□ 1.66
PMPCA-208ENST00000614402 CNKSR2Q8WXI2 1034 aa25.45■■□□□ 1.66
PMPCA-208ENST00000614402 API5Q9BZZ5 524 aaKnown RBP25.45■■□□□ 1.66
PMPCA-208ENST00000614402 RPAP1Q9BWH6 1393 aaPredicted RBP25.44■■□□□ 1.66
PMPCA-208ENST00000614402 CCER2I3L3R5 266 aa25.44■■□□□ 1.66
PMPCA-208ENST00000614402 MAP3K9P80192 1104 aa25.44■■□□□ 1.66
PMPCA-208ENST00000614402 OTUD7BQ6GQQ9 843 aa25.44■■□□□ 1.66
PMPCA-208ENST00000614402 WDR66Q8TBY9 1149 aa25.44■■□□□ 1.66
PMPCA-208ENST00000614402 SIL1Q9H173 461 aa25.43■■□□□ 1.66
PMPCA-208ENST00000614402 LRRFIP2Q9Y608 721 aaKnown RBP25.43■■□□□ 1.66
PMPCA-208ENST00000614402 OTOP1Q7RTM1 612 aa25.42■■□□□ 1.66
PMPCA-208ENST00000614402 TMOD2Q9NZR1 351 aa25.42■■□□□ 1.66
PMPCA-208ENST00000614402 RARSP54136 660 aaKnown RBP25.41■■□□□ 1.66
PMPCA-208ENST00000614402 ATP2B3Q16720 1220 aa25.41■■□□□ 1.66
PMPCA-208ENST00000614402 BRI3BPQ8WY22 251 aa25.41■■□□□ 1.66
PMPCA-208ENST00000614402 MEIS3Q99687 375 aa25.41■■□□□ 1.66
PMPCA-208ENST00000614402 TRIM17Q9Y577 477 aa25.41■■□□□ 1.66
PMPCA-208ENST00000614402 CSADQ9Y600 493 aa25.41■■□□□ 1.66
PMPCA-208ENST00000614402 SNCAIPQ9Y6H5 919 aa25.41■■□□□ 1.66
PMPCA-208ENST00000614402 PDE4DIPQ5VU43 2346 aa25.4■■□□□ 1.66
PMPCA-208ENST00000614402 SPDYE5A6NIY4 337 aa25.4■■□□□ 1.66
PMPCA-208ENST00000614402 CEP126Q9P2H0 1117 aa25.4■■□□□ 1.66
PMPCA-208ENST00000614402 ZBTB22O15209 634 aa25.39■■□□□ 1.66
PMPCA-208ENST00000614402 IL15P40933 162 aaPredicted RBP25.39■■□□□ 1.66
PMPCA-208ENST00000614402 GTF2A2P52657 109 aa25.39■■□□□ 1.66
PMPCA-208ENST00000614402 OTUD5Q96G74 571 aa25.39■■□□□ 1.66
PMPCA-208ENST00000614402 ERO1AQ96HE7 468 aa25.39■■□□□ 1.66
PMPCA-208ENST00000614402 COPRSQ9NQ92 184 aa25.39■■□□□ 1.66
PMPCA-208ENST00000614402 PA2G4Q9UQ80 394 aaKnown RBP25.39■■□□□ 1.66
PMPCA-208ENST00000614402 HDAC5Q9UQL6 1122 aa25.39■■□□□ 1.66
PMPCA-208ENST00000614402 DAGLAQ9Y4D2 1042 aa25.39■■□□□ 1.66
PMPCA-208ENST00000614402 SALL1Q9NSC2 1324 aa25.38■■□□□ 1.65
PMPCA-208ENST00000614402 CCL15-CCL14A0A0B4J2E2 113 aa25.38■■□□□ 1.65
PMPCA-208ENST00000614402 PRDX5P30044 214 aa25.38■■□□□ 1.65
PMPCA-208ENST00000614402 CAP1Q01518 475 aa25.38■■□□□ 1.65
PMPCA-208ENST00000614402 CCL15Q16663 113 aa25.38■■□□□ 1.65
PMPCA-208ENST00000614402 CD99L2Q8TCZ2 262 aa25.38■■□□□ 1.65
PMPCA-208ENST00000614402 ARHGAP45Q92619 1136 aa25.38■■□□□ 1.65
PMPCA-208ENST00000614402 HOOK2Q96ED9 719 aa25.38■■□□□ 1.65
PMPCA-208ENST00000614402 WRNIP1Q96S55 665 aa25.38■■□□□ 1.65
PMPCA-208ENST00000614402 DIXDC1Q155Q3 683 aa25.37■■□□□ 1.65
PMPCA-208ENST00000614402 INTS3Q68E01 1043 aaKnown RBP25.37■■□□□ 1.65
PMPCA-208ENST00000614402 SEMA3EO15041 775 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms