RNA–Protein interactions for RNA: ENST00000614377.1

CBWD3-209, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,994 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-209ENST00000614377 H7C1W4 665 aa3.55□□□□□ -1.84
CBWD3-209ENST00000614377 ENPP3O14638 875 aa3.55□□□□□ -1.84
CBWD3-209ENST00000614377 TRIM37O94972 964 aa3.55□□□□□ -1.84
CBWD3-209ENST00000614377 REC8O95072 547 aa3.55□□□□□ -1.84
CBWD3-209ENST00000614377 CCDC159P0C7I6 412 aa3.55□□□□□ -1.84
CBWD3-209ENST00000614377 TNNT1P13805 278 aa3.55□□□□□ -1.84
CBWD3-209ENST00000614377 XBP1P17861 261 aa3.55□□□□□ -1.84
CBWD3-209ENST00000614377 RPL17P18621 184 aaKnown RBP3.55□□□□□ -1.84
CBWD3-209ENST00000614377 MCM5P33992 734 aa3.55□□□□□ -1.84
CBWD3-209ENST00000614377 TBC1D8BQ0IIM8 1120 aa3.55□□□□□ -1.84
CBWD3-209ENST00000614377 TMED1Q13445 227 aa3.55□□□□□ -1.84
CBWD3-209ENST00000614377 HLTFQ14527 1009 aaKnown RBP eCLIP3.55□□□□□ -1.84
CBWD3-209ENST00000614377 FXNQ16595 210 aa3.55□□□□□ -1.84
CBWD3-209ENST00000614377 JAZF1Q86VZ6 243 aa3.55□□□□□ -1.84
CBWD3-209ENST00000614377 VWA5B2Q8N398 1253 aa3.55□□□□□ -1.84
CBWD3-209ENST00000614377 NBPF15Q8N660 670 aa3.55□□□□□ -1.84
CBWD3-209ENST00000614377 CCDC155Q8N6L0 562 aa3.55□□□□□ -1.84
CBWD3-209ENST00000614377 CHMP7Q8WUX9 453 aaPredicted RBP3.55□□□□□ -1.84
CBWD3-209ENST00000614377 SLC39A13Q96H72 371 aa3.55□□□□□ -1.84
CBWD3-209ENST00000614377 DHRS1Q96LJ7 313 aa3.55□□□□□ -1.84
CBWD3-209ENST00000614377 CDK15Q96Q40 435 aa3.55□□□□□ -1.84
CBWD3-209ENST00000614377 ZNF700Q9H0M5 742 aa3.55□□□□□ -1.84
CBWD3-209ENST00000614377 ZNF446Q9NWS9 450 aa3.55□□□□□ -1.84
CBWD3-209ENST00000614377 MKS1Q9NXB0 559 aa3.55□□□□□ -1.84
CBWD3-209ENST00000614377 QPCTLQ9NXS2 382 aa3.55□□□□□ -1.84
CBWD3-209ENST00000614377 POLKQ9UBT6 870 aa3.55□□□□□ -1.84
CBWD3-209ENST00000614377 POLG2Q9UHN1 485 aa3.55□□□□□ -1.84
CBWD3-209ENST00000614377 SCAPERQ9BY12 1400 aa3.55□□□□□ -1.84
CBWD3-209ENST00000614377 SHTN1A0MZ66 631 aa3.55□□□□□ -1.84
CBWD3-209ENST00000614377 A6NJY4 79 aa3.55□□□□□ -1.84
CBWD3-209ENST00000614377 POM121CA8CG34 1229 aa3.55□□□□□ -1.84
CBWD3-209ENST00000614377 CHL1O00533 1208 aa3.55□□□□□ -1.84
CBWD3-209ENST00000614377 SPTLC1O15269 473 aa3.55□□□□□ -1.84
CBWD3-209ENST00000614377 MMEP08473 750 aa3.55□□□□□ -1.84
CBWD3-209ENST00000614377 GRM5P41594 1212 aa3.55□□□□□ -1.84
CBWD3-209ENST00000614377 ALDH1L2Q3SY69 923 aa3.55□□□□□ -1.84
CBWD3-209ENST00000614377 SFMBT2Q5VUG0 894 aa3.55□□□□□ -1.84
CBWD3-209ENST00000614377 KANK3Q6NY19 840 aa3.55□□□□□ -1.84
CBWD3-209ENST00000614377 MYLK4Q86YV6 388 aaPredicted RBP3.55□□□□□ -1.84
CBWD3-209ENST00000614377 NDUFAF2Q8N183 169 aa3.55□□□□□ -1.84
CBWD3-209ENST00000614377 STK11IPQ8N1F8 1099 aa3.55□□□□□ -1.84
CBWD3-209ENST00000614377 CHCHD4Q8N4Q1 142 aa3.55□□□□□ -1.84
CBWD3-209ENST00000614377 THOC1Q96FV9 657 aaKnown RBP3.55□□□□□ -1.84
CBWD3-209ENST00000614377 CDHR1Q96JP9 859 aa3.55□□□□□ -1.84
CBWD3-209ENST00000614377 OSBPL2Q9H1P3 480 aa3.55□□□□□ -1.84
CBWD3-209ENST00000614377 TRAK1Q9UPV9 953 aa3.55□□□□□ -1.84
CBWD3-209ENST00000614377 DIS3Q9Y2L1 958 aaKnown RBP3.55□□□□□ -1.84
CBWD3-209ENST00000614377 N6AMT1Q9Y5N5 214 aa3.55□□□□□ -1.84
CBWD3-209ENST00000614377 GOLGA6L22H0YM25 854 aa3.54□□□□□ -1.84
CBWD3-209ENST00000614377 NPHP1O15259 732 aa3.54□□□□□ -1.84
CBWD3-209ENST00000614377 CCDC175P0C221 793 aa3.54□□□□□ -1.84
CBWD3-209ENST00000614377 HARSP12081 509 aaKnown RBP3.54□□□□□ -1.84
CBWD3-209ENST00000614377 CYP2C19P33261 490 aa3.54□□□□□ -1.84
CBWD3-209ENST00000614377 TRAPPC10P48553 1259 aa3.54□□□□□ -1.84
CBWD3-209ENST00000614377 FOXK2Q01167 660 aa3.54□□□□□ -1.84
CBWD3-209ENST00000614377 WASHC5Q12768 1159 aa3.54□□□□□ -1.84
CBWD3-209ENST00000614377 MTMR2Q13614 643 aa3.54□□□□□ -1.84
CBWD3-209ENST00000614377 GNL2Q13823 731 aaKnown RBP3.54□□□□□ -1.84
CBWD3-209ENST00000614377 TTLL12Q14166 644 aaPredicted RBP3.54□□□□□ -1.84
CBWD3-209ENST00000614377 TMEM95Q3KNT9 176 aa3.54□□□□□ -1.84
CBWD3-209ENST00000614377 C4orf48Q5BLP8 95 aa3.54□□□□□ -1.84
CBWD3-209ENST00000614377 TAX1BP1Q86VP1 789 aa3.54□□□□□ -1.84
CBWD3-209ENST00000614377 CLASRPQ8N2M8 674 aaKnown RBP3.54□□□□□ -1.84
CBWD3-209ENST00000614377 TSC1Q92574 1164 aa3.54□□□□□ -1.84
CBWD3-209ENST00000614377 SMARCC1Q92922 1105 aaPredicted RBP3.54□□□□□ -1.84
CBWD3-209ENST00000614377 SCARF2Q96GP6 870 aaPredicted RBP3.54□□□□□ -1.84
CBWD3-209ENST00000614377 PRIMPOLQ96LW4 560 aa3.54□□□□□ -1.84
CBWD3-209ENST00000614377 SH3GL3Q99963 347 aa3.54□□□□□ -1.84
CBWD3-209ENST00000614377 TSEN34Q9BSV6 310 aaKnown RBP3.54□□□□□ -1.84
CBWD3-209ENST00000614377 PPP1R12CQ9BZL4 782 aa3.54□□□□□ -1.84
CBWD3-209ENST00000614377 TRIM7Q9C029 511 aa3.54□□□□□ -1.84
CBWD3-209ENST00000614377 GRPEL1Q9HAV7 217 aa3.54□□□□□ -1.84
CBWD3-209ENST00000614377 SNRKQ9NRH2 765 aa3.54□□□□□ -1.84
CBWD3-209ENST00000614377 LMCD1Q9NZU5 365 aa3.54□□□□□ -1.84
CBWD3-209ENST00000614377 CWC15Q9P013 229 aaKnown RBP3.54□□□□□ -1.84
CBWD3-209ENST00000614377 TBC1D7Q9P0N9 293 aa3.54□□□□□ -1.84
CBWD3-209ENST00000614377 SLAIN2Q9P270 581 aa3.54□□□□□ -1.84
CBWD3-209ENST00000614377 TBX3O15119 743 aa3.54□□□□□ -1.84
CBWD3-209ENST00000614377 ADAM23O75077 832 aa3.54□□□□□ -1.84
CBWD3-209ENST00000614377 ARHGEF15O94989 841 aa3.54□□□□□ -1.84
CBWD3-209ENST00000614377 SMARCA1P28370 1054 aa3.54□□□□□ -1.84
CBWD3-209ENST00000614377 GNALP38405 381 aa3.54□□□□□ -1.84
CBWD3-209ENST00000614377 DEUP1Q05D60 604 aa3.54□□□□□ -1.84
CBWD3-209ENST00000614377 NSUN2Q08J23 767 aaKnown RBP eCLIP3.54□□□□□ -1.84
CBWD3-209ENST00000614377 CCDC173Q0VFZ6 552 aa3.54□□□□□ -1.84
CBWD3-209ENST00000614377 ENOX2Q16206 610 aaKnown RBP3.54□□□□□ -1.84
CBWD3-209ENST00000614377 TMEM259Q4ZIN3 620 aa3.54□□□□□ -1.84
CBWD3-209ENST00000614377 ODR4Q5SWX8 454 aa3.54□□□□□ -1.84
CBWD3-209ENST00000614377 ACBD5Q5T8D3 534 aaPredicted RBP3.54□□□□□ -1.84
CBWD3-209ENST00000614377 MYSM1Q5VVJ2 828 aa3.54□□□□□ -1.84
CBWD3-209ENST00000614377 TTC19Q6DKK2 380 aaPredicted RBP3.54□□□□□ -1.84
CBWD3-209ENST00000614377 SYNE3Q6ZMZ3 975 aa3.54□□□□□ -1.84
CBWD3-209ENST00000614377 ZNF483Q8TF39 744 aaPredicted RBP3.54□□□□□ -1.84
CBWD3-209ENST00000614377 TBC1D5Q92609 795 aa3.54□□□□□ -1.84
CBWD3-209ENST00000614377 SYAP1Q96A49 352 aaPredicted RBP3.54□□□□□ -1.84
CBWD3-209ENST00000614377 RMDN2Q96LZ7 410 aa3.54□□□□□ -1.84
CBWD3-209ENST00000614377 ALDH8A1Q9H2A2 487 aaPredicted RBP3.54□□□□□ -1.84
CBWD3-209ENST00000614377 GDPD2Q9HCC8 539 aa3.54□□□□□ -1.84
CBWD3-209ENST00000614377 ITM2BQ9Y287 266 aa3.54□□□□□ -1.84
CBWD3-209ENST00000614377 SLC30A1Q9Y6M5 507 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms