RNA–Protein interactions for RNA: ENST00000613988.4

CBWD1-223, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-223ENST00000613988 CRKP46108 304 aa27.12■■□□□ 1.93
CBWD1-223ENST00000613988 TNFAIP1Q13829 316 aa27.12■■□□□ 1.93
CBWD1-223ENST00000613988 SPDYE2Q495Y8 402 aa27.12■■□□□ 1.93
CBWD1-223ENST00000613988 SPRYD7Q5W111 196 aa27.12■■□□□ 1.93
CBWD1-223ENST00000613988 SSC5DA1L4H1 1573 aa27.11■■□□□ 1.93
CBWD1-223ENST00000613988 ARAP2Q8WZ64 1704 aa27.11■■□□□ 1.93
CBWD1-223ENST00000613988 FGFR2P21802 821 aa27.1■■□□□ 1.93
CBWD1-223ENST00000613988 GRIK5Q16478 980 aa27.1■■□□□ 1.93
CBWD1-223ENST00000613988 UNCXA6NJT0 531 aa27.09■■□□□ 1.93
CBWD1-223ENST00000613988 HDAC5Q9UQL6 1122 aa27.09■■□□□ 1.93
CBWD1-223ENST00000613988 KIF16BQ96L93 1317 aa27.09■■□□□ 1.93
CBWD1-223ENST00000613988 SLC5A1P13866 664 aa27.09■■□□□ 1.93
CBWD1-223ENST00000613988 IREB2P48200 963 aaKnown RBP27.09■■□□□ 1.93
CBWD1-223ENST00000613988 RARSP54136 660 aaKnown RBP27.09■■□□□ 1.93
CBWD1-223ENST00000613988 LPIN2Q92539 896 aa27.09■■□□□ 1.93
CBWD1-223ENST00000613988 CLMNQ96JQ2 1002 aa27.09■■□□□ 1.93
CBWD1-223ENST00000613988 USP2O75604 605 aaPredicted RBP27.08■■□□□ 1.93
CBWD1-223ENST00000613988 HDLBPQ00341 1268 aaKnown RBP27.08■■□□□ 1.93
CBWD1-223ENST00000613988 ATG9AQ7Z3C6 839 aa27.08■■□□□ 1.93
CBWD1-223ENST00000613988 CTU1Q7Z7A3 348 aaKnown RBP27.08■■□□□ 1.93
CBWD1-223ENST00000613988 SIL1Q9H173 461 aa27.08■■□□□ 1.93
CBWD1-223ENST00000613988 TCP10L2B9ZVM9 353 aa27.07■■□□□ 1.92
CBWD1-223ENST00000613988 TNNI2P48788 182 aa27.07■■□□□ 1.92
CBWD1-223ENST00000613988 TEKT1Q969V4 418 aa27.07■■□□□ 1.92
CBWD1-223ENST00000613988 LRRFIP2Q9Y608 721 aaKnown RBP27.07■■□□□ 1.92
CBWD1-223ENST00000613988 MANSC4A6NHS7 340 aaPredicted RBP27.06■■□□□ 1.92
CBWD1-223ENST00000613988 ZBTB48P10074 688 aaPredicted RBP27.06■■□□□ 1.92
CBWD1-223ENST00000613988 INHBEP58166 350 aa27.06■■□□□ 1.92
CBWD1-223ENST00000613988 ZNF296Q8WUU4 475 aaPredicted RBP27.06■■□□□ 1.92
CBWD1-223ENST00000613988 WNK4Q96J92 1243 aa27.06■■□□□ 1.92
CBWD1-223ENST00000613988 FBXO3Q9UK99 471 aa27.06■■□□□ 1.92
CBWD1-223ENST00000613988 CIAO1O76071 339 aa27.05■■□□□ 1.92
CBWD1-223ENST00000613988 ANKRD13AQ8IZ07 590 aa27.05■■□□□ 1.92
CBWD1-223ENST00000613988 MRIQ9BWK5 157 aa27.05■■□□□ 1.92
CBWD1-223ENST00000613988 GPR25O00155 361 aa27.04■■□□□ 1.92
CBWD1-223ENST00000613988 ALDH1A1P00352 501 aa27.04■■□□□ 1.92
CBWD1-223ENST00000613988 RGS19P49795 217 aa27.04■■□□□ 1.92
CBWD1-223ENST00000613988 ARHGAP45Q92619 1136 aa27.04■■□□□ 1.92
CBWD1-223ENST00000613988 CEP126Q9P2H0 1117 aa27.04■■□□□ 1.92
CBWD1-223ENST00000613988 SUGT1Q9Y2Z0 365 aa27.04■■□□□ 1.92
CBWD1-223ENST00000613988 ZDHHC15Q96MV8 337 aa27.03■■□□□ 1.92
CBWD1-223ENST00000613988 TEPSINQ96N21 525 aa27.03■■□□□ 1.92
CBWD1-223ENST00000613988 MEIS3Q99687 375 aa27.03■■□□□ 1.92
CBWD1-223ENST00000613988 TMEM39BQ9GZU3 492 aa27.03■■□□□ 1.92
CBWD1-223ENST00000613988 MAST3O60307 1309 aa27.03■■□□□ 1.92
CBWD1-223ENST00000613988 NOM1Q5C9Z4 860 aaKnown RBP27.02■■□□□ 1.92
CBWD1-223ENST00000613988 CDAN1Q8IWY9 1227 aa27.02■■□□□ 1.92
CBWD1-223ENST00000613988 WDR66Q8TBY9 1149 aa27.02■■□□□ 1.92
CBWD1-223ENST00000613988 CFHR5Q9BXR6 569 aa27.02■■□□□ 1.92
CBWD1-223ENST00000613988 IL15P40933 162 aaPredicted RBP27.01■■□□□ 1.91
CBWD1-223ENST00000613988 MLLT1Q03111 559 aaPredicted RBP27.01■■□□□ 1.91
CBWD1-223ENST00000613988 ATP2B3Q16720 1220 aa27.01■■□□□ 1.91
CBWD1-223ENST00000613988 IFNL1Q8IU54 200 aa27.01■■□□□ 1.91
CBWD1-223ENST00000613988 CACNB3P54284 484 aa27■■□□□ 1.91
CBWD1-223ENST00000613988 INTS3Q68E01 1043 aaKnown RBP27■■□□□ 1.91
CBWD1-223ENST00000613988 R3HDMLQ9H3Y0 253 aa27■■□□□ 1.91
CBWD1-223ENST00000613988 TMOD2Q9NZR1 351 aa27■■□□□ 1.91
CBWD1-223ENST00000613988 PA2G4Q9UQ80 394 aaKnown RBP27■■□□□ 1.91
CBWD1-223ENST00000613988 ELP3Q9H9T3 547 aa26.99■■□□□ 1.91
CBWD1-223ENST00000613988 GNL3LQ9NVN8 582 aaKnown RBP26.99■■□□□ 1.91
CBWD1-223ENST00000613988 MYH13Q9UKX3 1938 aa26.99■■□□□ 1.91
CBWD1-223ENST00000613988 IPO8O15397 1037 aaKnown RBP26.98■■□□□ 1.91
CBWD1-223ENST00000613988 FKTNO75072 461 aa26.98■■□□□ 1.91
CBWD1-223ENST00000613988 GNAI3P08754 354 aa26.98■■□□□ 1.91
CBWD1-223ENST00000613988 PKN2Q16513 984 aaKnown RBP26.98■■□□□ 1.91
CBWD1-223ENST00000613988 ERICH6BQ5W0A0 696 aa26.98■■□□□ 1.91
CBWD1-223ENST00000613988 APOBEC3HQ6NTF7 200 aaKnown RBP26.98■■□□□ 1.91
CBWD1-223ENST00000613988 HHIPL2Q6UWX4 724 aa26.98■■□□□ 1.91
CBWD1-223ENST00000613988 COPRSQ9NQ92 184 aa26.98■■□□□ 1.91
CBWD1-223ENST00000613988 GJA5P36382 358 aa26.97■■□□□ 1.91
CBWD1-223ENST00000613988 RRP1P56182 461 aaKnown RBP26.97■■□□□ 1.91
CBWD1-223ENST00000613988 IGF2BP3O00425 579 aaKnown RBP eCLIP26.97■■□□□ 1.91
CBWD1-223ENST00000613988 MAP3K9P80192 1104 aa26.97■■□□□ 1.91
CBWD1-223ENST00000613988 OTUD7BQ6GQQ9 843 aa26.97■■□□□ 1.91
CBWD1-223ENST00000613988 OPTNQ96CV9 577 aa26.97■■□□□ 1.91
CBWD1-223ENST00000613988 FKBP1CQ5VVH2 108 aa26.96■■□□□ 1.91
CBWD1-223ENST00000613988 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.96■■□□□ 1.91
CBWD1-223ENST00000613988 FAM83AQ86UY5 434 aa26.96■■□□□ 1.91
CBWD1-223ENST00000613988 FRAT1Q92837 279 aaPredicted RBP26.96■■□□□ 1.91
CBWD1-223ENST00000613988 OTOFQ9HC10 1997 aa26.95■■□□□ 1.9
CBWD1-223ENST00000613988 SRGAP3O43295 1099 aa26.94■■□□□ 1.9
CBWD1-223ENST00000613988 BCAR3O75815 825 aa26.94■■□□□ 1.9
CBWD1-223ENST00000613988 VGLL4Q14135 290 aa26.94■■□□□ 1.9
CBWD1-223ENST00000613988 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.94■■□□□ 1.9
CBWD1-223ENST00000613988 DENND2AQ9ULE3 1009 aa26.94■■□□□ 1.9
CBWD1-223ENST00000613988 HPS5Q9UPZ3 1129 aa26.94■■□□□ 1.9
CBWD1-223ENST00000613988 CSADQ9Y600 493 aa26.94■■□□□ 1.9
CBWD1-223ENST00000613988 LAMB1P07942 1786 aa26.93■■□□□ 1.9
CBWD1-223ENST00000613988 TRIM27P14373 513 aa26.93■■□□□ 1.9
CBWD1-223ENST00000613988 PHKA1P46020 1223 aa26.93■■□□□ 1.9
CBWD1-223ENST00000613988 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.93■■□□□ 1.9
CBWD1-223ENST00000613988 HOOK2Q96ED9 719 aa26.93■■□□□ 1.9
CBWD1-223ENST00000613988 TESPA1A2RU30 521 aaPredicted RBP26.92■■□□□ 1.9
CBWD1-223ENST00000613988 SEMA3EO15041 775 aa26.92■■□□□ 1.9
CBWD1-223ENST00000613988 LDHBP07195 334 aaKnown RBP26.92■■□□□ 1.9
CBWD1-223ENST00000613988 PRDX5P30044 214 aa26.92■■□□□ 1.9
CBWD1-223ENST00000613988 ATF7IPQ6VMQ6 1270 aa26.92■■□□□ 1.9
CBWD1-223ENST00000613988 PTPN18Q99952 460 aa26.92■■□□□ 1.9
CBWD1-223ENST00000613988 ADORA1P30542 326 aa26.91■■□□□ 1.9
CBWD1-223ENST00000613988 SOX10P56693 466 aa26.91■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms