RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 SLF2Q8IX21 1173 aa17.77■□□□□ 0.44
CD48-203ENST00000613788 DPF2Q92785 391 aa17.77■□□□□ 0.44
CD48-203ENST00000613788 GMLQ99445 158 aa17.77■□□□□ 0.44
CD48-203ENST00000613788 TTF2Q9UNY4 1162 aaKnown RBP17.77■□□□□ 0.44
CD48-203ENST00000613788 ZBTB12Q9Y330 459 aaPredicted RBP17.77■□□□□ 0.44
CD48-203ENST00000613788 LDHCP07864 332 aa17.77■□□□□ 0.43
CD48-203ENST00000613788 MECOMQ03112 1051 aa17.77■□□□□ 0.43
CD48-203ENST00000613788 GRIK5Q16478 980 aa17.77■□□□□ 0.43
CD48-203ENST00000613788 NAA16Q6N069 864 aaPredicted RBP17.77■□□□□ 0.43
CD48-203ENST00000613788 OGFOD1Q8N543 542 aa17.77■□□□□ 0.43
CD48-203ENST00000613788 NSUN4Q96CB9 384 aaKnown RBP17.77■□□□□ 0.43
CD48-203ENST00000613788 MRIQ9BWK5 157 aa17.77■□□□□ 0.43
CD48-203ENST00000613788 HDAC9Q9UKV0 1011 aa17.77■□□□□ 0.43
CD48-203ENST00000613788 RFX7Q2KHR2 1363 aa17.76■□□□□ 0.43
CD48-203ENST00000613788 F8W031 263 aaPredicted RBP17.76■□□□□ 0.43
CD48-203ENST00000613788 RNF113AO15541 343 aaKnown RBP17.76■□□□□ 0.43
CD48-203ENST00000613788 USP17L8P0C7I0 530 aa17.76■□□□□ 0.43
CD48-203ENST00000613788 PDE6AP16499 860 aa17.76■□□□□ 0.43
CD48-203ENST00000613788 ADD2P35612 726 aa17.76■□□□□ 0.43
CD48-203ENST00000613788 UBE3CQ15386 1083 aa17.76■□□□□ 0.43
CD48-203ENST00000613788 MAGEB6Q8N7X4 407 aa17.76■□□□□ 0.43
CD48-203ENST00000613788 GMPSP49915 693 aaPredicted RBP17.75■□□□□ 0.43
CD48-203ENST00000613788 HDLBPQ00341 1268 aaKnown RBP17.75■□□□□ 0.43
CD48-203ENST00000613788 DIAPH3Q9NSV4 1193 aa17.75■□□□□ 0.43
CD48-203ENST00000613788 PSME4Q14997 1843 aa17.75■□□□□ 0.43
CD48-203ENST00000613788 GLTPD2A6NH11 291 aa17.74■□□□□ 0.43
CD48-203ENST00000613788 DDNO94850 711 aaPredicted RBP17.74■□□□□ 0.43
CD48-203ENST00000613788 CYP7A1P22680 504 aa17.74■□□□□ 0.43
CD48-203ENST00000613788 CASC1Q6TDU7 716 aa17.74■□□□□ 0.43
CD48-203ENST00000613788 TEKT1Q969V4 418 aa17.74■□□□□ 0.43
CD48-203ENST00000613788 FAM163AQ96GL9 167 aaPredicted RBP17.74■□□□□ 0.43
CD48-203ENST00000613788 ZNF532Q9HCE3 1301 aa17.74■□□□□ 0.43
CD48-203ENST00000613788 CDC45O75419 566 aa17.73■□□□□ 0.43
CD48-203ENST00000613788 HHIPL2Q6UWX4 724 aa17.73■□□□□ 0.43
CD48-203ENST00000613788 SERPINA10Q9UK55 444 aa17.73■□□□□ 0.43
CD48-203ENST00000613788 TIAM2Q8IVF5 1701 aa17.73■□□□□ 0.43
CD48-203ENST00000613788 TCRBV5S4A2TA0A5A2 114 aa17.72■□□□□ 0.43
CD48-203ENST00000613788 H7C1D1 291 aa17.72■□□□□ 0.43
CD48-203ENST00000613788 CHMLP26374 656 aa17.72■□□□□ 0.43
CD48-203ENST00000613788 SCNN1DP51172 638 aa17.72■□□□□ 0.43
CD48-203ENST00000613788 RUFY2Q8WXA3 655 aa17.72■□□□□ 0.43
CD48-203ENST00000613788 APPBP2Q92624 585 aa17.72■□□□□ 0.43
CD48-203ENST00000613788 NOL10Q9BSC4 688 aaKnown RBP17.72■□□□□ 0.43
CD48-203ENST00000613788 CNOT7Q9UIV1 285 aaKnown RBP17.72■□□□□ 0.43
CD48-203ENST00000613788 LMOD1P29536 600 aaPredicted RBP17.72■□□□□ 0.43
CD48-203ENST00000613788 CRKP46108 304 aa17.72■□□□□ 0.43
CD48-203ENST00000613788 RBM5P52756 815 aaKnown RBP eCLIP17.72■□□□□ 0.43
CD48-203ENST00000613788 DIXDC1Q155Q3 683 aa17.72■□□□□ 0.43
CD48-203ENST00000613788 ZMYM1Q5SVZ6 1142 aa17.72■□□□□ 0.43
CD48-203ENST00000613788 ZNF384Q8TF68 577 aa17.72■□□□□ 0.43
CD48-203ENST00000613788 HELLSQ9NRZ9 838 aa17.72■□□□□ 0.43
CD48-203ENST00000613788 GPRC5DQ9NZD1 345 aa17.72■□□□□ 0.43
CD48-203ENST00000613788 BAG3O95817 575 aa17.71■□□□□ 0.43
CD48-203ENST00000613788 ZNF280AP59817 542 aaPredicted RBP17.71■□□□□ 0.43
CD48-203ENST00000613788 CERS3Q8IU89 383 aa17.71■□□□□ 0.43
CD48-203ENST00000613788 MICALL2Q8IY33 904 aa17.71■□□□□ 0.43
CD48-203ENST00000613788 MROH7-TTC4A0A0A0MT08 1334 aa17.71■□□□□ 0.43
CD48-203ENST00000613788 DOCK2Q92608 1830 aa17.7■□□□□ 0.42
CD48-203ENST00000613788 NMIQ13287 307 aaPredicted RBP17.7■□□□□ 0.42
CD48-203ENST00000613788 DLGAP5Q15398 846 aa17.7■□□□□ 0.42
CD48-203ENST00000613788 MCMDC2Q4G0Z9 681 aa17.7■□□□□ 0.42
CD48-203ENST00000613788 CWC27Q6UX04 472 aaKnown RBP17.7■□□□□ 0.42
CD48-203ENST00000613788 L3MBTL3Q96JM7 780 aaPredicted RBP17.7■□□□□ 0.42
CD48-203ENST00000613788 ZDHHC15Q96MV8 337 aa17.7■□□□□ 0.42
CD48-203ENST00000613788 GAKO14976 1311 aa17.7■□□□□ 0.42
CD48-203ENST00000613788 ZNF646O15015 1829 aaPredicted RBP17.7■□□□□ 0.42
CD48-203ENST00000613788 GPR75-ASB3A0A0A6YYF3 556 aa17.69■□□□□ 0.42
CD48-203ENST00000613788 CHGBP05060 677 aa17.69■□□□□ 0.42
CD48-203ENST00000613788 CFAP100Q494V2 611 aa17.69■□□□□ 0.42
CD48-203ENST00000613788 SLFNL1Q499Z3 407 aa17.69■□□□□ 0.42
CD48-203ENST00000613788 MTMR14Q8NCE2 650 aa17.69■□□□□ 0.42
CD48-203ENST00000613788 OSBP2Q969R2 916 aa17.69■□□□□ 0.42
CD48-203ENST00000613788 FAM227BQ96M60 508 aa17.69■□□□□ 0.42
CD48-203ENST00000613788 MYOZ2Q9NPC6 264 aa17.69■□□□□ 0.42
CD48-203ENST00000613788 MAGEB6P1A0A0J9YX57 407 aa17.68■□□□□ 0.42
CD48-203ENST00000613788 MFAP1P55081 439 aaKnown RBP17.68■□□□□ 0.42
CD48-203ENST00000613788 PPP4CP60510 307 aa17.68■□□□□ 0.42
CD48-203ENST00000613788 ADGRA1Q86SQ6 560 aa17.68■□□□□ 0.42
CD48-203ENST00000613788 AIDAQ96BJ3 306 aa17.68■□□□□ 0.42
CD48-203ENST00000613788 PUS7LQ9H0K6 701 aaKnown RBP17.68■□□□□ 0.42
CD48-203ENST00000613788 DAGLAQ9Y4D2 1042 aa17.68■□□□□ 0.42
CD48-203ENST00000613788 AK9Q5TCS8 1911 aa17.68■□□□□ 0.42
CD48-203ENST00000613788 MYO5AQ9Y4I1 1855 aaKnown RBP17.68■□□□□ 0.42
CD48-203ENST00000613788 A0A0D9SFI3 127 aa17.67■□□□□ 0.42
CD48-203ENST00000613788 IQCA1LA6NCM1 817 aa17.67■□□□□ 0.42
CD48-203ENST00000613788 PLCG2P16885 1265 aa17.67■□□□□ 0.42
CD48-203ENST00000613788 BTDP43251 543 aa17.67■□□□□ 0.42
CD48-203ENST00000613788 MIGA1Q8NAN2 632 aa17.67■□□□□ 0.42
CD48-203ENST00000613788 AATFQ9NY61 560 aaKnown RBP eCLIP17.67■□□□□ 0.42
CD48-203ENST00000613788 RAD50Q92878 1312 aa17.67■□□□□ 0.42
CD48-203ENST00000613788 EIF5BO60841 1220 aaKnown RBP17.67■□□□□ 0.42
CD48-203ENST00000613788 EPS15P42566 896 aa17.67■□□□□ 0.42
CD48-203ENST00000613788 APOBEC3HQ6NTF7 200 aaKnown RBP17.67■□□□□ 0.42
CD48-203ENST00000613788 SEC62Q99442 399 aaKnown RBP17.67■□□□□ 0.42
CD48-203ENST00000613788 ADARB2Q9NS39 739 aaKnown RBP17.67■□□□□ 0.42
CD48-203ENST00000613788 HACL1Q9UJ83 578 aa17.67■□□□□ 0.42
CD48-203ENST00000613788 MAST2Q6P0Q8 1798 aa17.66■□□□□ 0.42
CD48-203ENST00000613788 SHTN1A0MZ66 631 aa17.66■□□□□ 0.42
CD48-203ENST00000613788 SPDYE2BA6NHP3 402 aa17.66■□□□□ 0.42
CD48-203ENST00000613788 MYO1BO43795 1136 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms