RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 NUCB1Q02818 461 aa16.16■□□□□ 0.18
MDC1-209ENST00000613547 TTF1Q15361 905 aaPredicted RBP16.16■□□□□ 0.18
MDC1-209ENST00000613547 CFAP100Q494V2 611 aa16.16■□□□□ 0.18
MDC1-209ENST00000613547 ERICH6BQ5W0A0 696 aa16.16■□□□□ 0.18
MDC1-209ENST00000613547 CHADLQ6NUI6 762 aa16.16■□□□□ 0.18
MDC1-209ENST00000613547 ERICH6Q7L0X2 663 aa16.16■□□□□ 0.18
MDC1-209ENST00000613547 CHD1LQ86WJ1 897 aa16.16■□□□□ 0.18
MDC1-209ENST00000613547 MTMR14Q8NCE2 650 aa16.16■□□□□ 0.18
MDC1-209ENST00000613547 TTC41PQ6P2S7 1318 aa16.16■□□□□ 0.18
MDC1-209ENST00000613547 POTEIP0CG38 1075 aa16.15■□□□□ 0.18
MDC1-209ENST00000613547 POTEJP0CG39 1038 aa16.15■□□□□ 0.18
MDC1-209ENST00000613547 CRKP46108 304 aa16.15■□□□□ 0.18
MDC1-209ENST00000613547 GSTO1P78417 241 aa16.15■□□□□ 0.18
MDC1-209ENST00000613547 FSTL1Q12841 308 aa16.15■□□□□ 0.18
MDC1-209ENST00000613547 DCPSQ96C86 337 aaKnown RBP16.15■□□□□ 0.18
MDC1-209ENST00000613547 DNAJC2Q99543 621 aaKnown RBP16.15■□□□□ 0.18
MDC1-209ENST00000613547 MRIQ9BWK5 157 aa16.15■□□□□ 0.18
MDC1-209ENST00000613547 LNPKQ9C0E8 428 aa16.15■□□□□ 0.18
MDC1-209ENST00000613547 RAI14Q9P0K7 980 aa16.15■□□□□ 0.18
MDC1-209ENST00000613547 SPDYE2BA6NHP3 402 aa16.14■□□□□ 0.17
MDC1-209ENST00000613547 EGFRP00533 1210 aa16.14■□□□□ 0.17
MDC1-209ENST00000613547 CYP2E1P05181 493 aaPredicted RBP16.14■□□□□ 0.17
MDC1-209ENST00000613547 SPDYE6P0CI01 402 aa16.14■□□□□ 0.17
MDC1-209ENST00000613547 MX1P20591 662 aa16.14■□□□□ 0.17
MDC1-209ENST00000613547 HIRAP54198 1017 aaPredicted RBP16.14■□□□□ 0.17
MDC1-209ENST00000613547 GRIK5Q16478 980 aa16.14■□□□□ 0.17
MDC1-209ENST00000613547 HHIPL2Q6UWX4 724 aa16.14■□□□□ 0.17
MDC1-209ENST00000613547 TBC1D9Q6ZT07 1266 aa16.14■□□□□ 0.17
MDC1-209ENST00000613547 CCDC136Q96JN2 1154 aa16.14■□□□□ 0.17
MDC1-209ENST00000613547 ZNF646O15015 1829 aaPredicted RBP16.13■□□□□ 0.17
MDC1-209ENST00000613547 WNT10BO00744 389 aa16.13■□□□□ 0.17
MDC1-209ENST00000613547 LDHCP07864 332 aa16.13■□□□□ 0.17
MDC1-209ENST00000613547 BOLA2Q9H3K6 86 aa16.13■□□□□ 0.17
MDC1-209ENST00000613547 GGA3Q9NZ52 723 aa16.13■□□□□ 0.17
MDC1-209ENST00000613547 PGAP2Q9UHJ9 254 aa16.13■□□□□ 0.17
MDC1-209ENST00000613547 GOLIM4O00461 696 aa16.12■□□□□ 0.17
MDC1-209ENST00000613547 IDH1O75874 414 aaKnown RBP16.12■□□□□ 0.17
MDC1-209ENST00000613547 GLRX3O76003 335 aaKnown RBP16.12■□□□□ 0.17
MDC1-209ENST00000613547 MECOMQ03112 1051 aa16.12■□□□□ 0.17
MDC1-209ENST00000613547 MAP3K12Q12852 859 aa16.12■□□□□ 0.17
MDC1-209ENST00000613547 NBPF9Q3BBW0 867 aa16.12■□□□□ 0.17
MDC1-209ENST00000613547 ANGEL2Q5VTE6 544 aaKnown RBP16.12■□□□□ 0.17
MDC1-209ENST00000613547 TMED8Q6PL24 325 aaPredicted RBP16.12■□□□□ 0.17
MDC1-209ENST00000613547 CENPQQ7L2Z9 268 aaPredicted RBP16.12■□□□□ 0.17
MDC1-209ENST00000613547 SULF1Q8IWU6 871 aa16.12■□□□□ 0.17
MDC1-209ENST00000613547 ZBED3Q96IU2 234 aaPredicted RBP16.12■□□□□ 0.17
MDC1-209ENST00000613547 ZDHHC15Q96MV8 337 aa16.12■□□□□ 0.17
MDC1-209ENST00000613547 HAUS7Q99871 368 aa16.12■□□□□ 0.17
MDC1-209ENST00000613547 PAG1Q9NWQ8 432 aa16.12■□□□□ 0.17
MDC1-209ENST00000613547 PITPNM2Q9BZ72 1349 aa16.12■□□□□ 0.17
MDC1-209ENST00000613547 MYH13Q9UKX3 1938 aa16.11■□□□□ 0.17
MDC1-209ENST00000613547 DIXDC1Q155Q3 683 aa16.11■□□□□ 0.17
MDC1-209ENST00000613547 MAP1SQ66K74 1059 aaPredicted RBP16.11■□□□□ 0.17
MDC1-209ENST00000613547 CDC37L1Q7L3B6 337 aa16.11■□□□□ 0.17
MDC1-209ENST00000613547 CNTROBQ8N137 903 aa16.11■□□□□ 0.17
MDC1-209ENST00000613547 OTUD7AQ8TE49 926 aaPredicted RBP16.11■□□□□ 0.17
MDC1-209ENST00000613547 NOL10Q9BSC4 688 aaKnown RBP16.11■□□□□ 0.17
MDC1-209ENST00000613547 PIH1D3Q9NQM4 214 aaKnown RBP16.11■□□□□ 0.17
MDC1-209ENST00000613547 TMOD2Q9NZR1 351 aa16.11■□□□□ 0.17
MDC1-209ENST00000613547 NAA16Q6N069 864 aaPredicted RBP16.1■□□□□ 0.17
MDC1-209ENST00000613547 KRT26Q7Z3Y9 468 aa16.1■□□□□ 0.17
MDC1-209ENST00000613547 APOBEC3FQ8IUX4 373 aaKnown RBP16.1■□□□□ 0.17
MDC1-209ENST00000613547 NSUN4Q96CB9 384 aaKnown RBP16.1■□□□□ 0.17
MDC1-209ENST00000613547 PRMT6Q96LA8 375 aaPredicted RBP16.1■□□□□ 0.17
MDC1-209ENST00000613547 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.1■□□□□ 0.172e-7■□□□□ 10.3
MDC1-209ENST00000613547 STAP2Q9UGK3 403 aa16.1■□□□□ 0.17
MDC1-209ENST00000613547 NDUFB9Q9Y6M9 179 aa16.1■□□□□ 0.17
MDC1-209ENST00000613547 ADAMTSL1Q8N6G6 1762 aa16.09■□□□□ 0.17
MDC1-209ENST00000613547 PDE1AP54750 535 aa16.09■□□□□ 0.17
MDC1-209ENST00000613547 TNFAIP1Q13829 316 aa16.09■□□□□ 0.17
MDC1-209ENST00000613547 TSHZ3Q63HK5 1081 aa16.09■□□□□ 0.17
MDC1-209ENST00000613547 FAM163AQ96GL9 167 aaPredicted RBP16.09■□□□□ 0.17
MDC1-209ENST00000613547 ANTXR1Q9H6X2 564 aa16.09■□□□□ 0.17
MDC1-209ENST00000613547 VEZTQ9HBM0 779 aa16.09■□□□□ 0.17
MDC1-209ENST00000613547 DAGLAQ9Y4D2 1042 aa16.09■□□□□ 0.17
MDC1-209ENST00000613547 MROH7-TTC4A0A0A0MT08 1334 aa16.09■□□□□ 0.17
MDC1-209ENST00000613547 AOX1Q06278 1338 aa16.09■□□□□ 0.17
MDC1-209ENST00000613547 SALL3Q9BXA9 1300 aa16.09■□□□□ 0.17
MDC1-209ENST00000613547 CLRN2A0PK11 232 aa16.08■□□□□ 0.16
MDC1-209ENST00000613547 BAG3O95817 575 aa16.08■□□□□ 0.16
MDC1-209ENST00000613547 C1QTNF8P60827 252 aa16.08■□□□□ 0.16
MDC1-209ENST00000613547 LRRFIP1Q32MZ4 808 aaKnown RBP16.08■□□□□ 0.16
MDC1-209ENST00000613547 SPDYE2Q495Y8 402 aa16.08■□□□□ 0.16
MDC1-209ENST00000613547 ZSCAN25Q6NSZ9 544 aa16.08■□□□□ 0.16
MDC1-209ENST00000613547 PI4K2BQ8TCG2 481 aa16.08■□□□□ 0.16
MDC1-209ENST00000613547 GLIS2Q9BZE0 524 aaPredicted RBP16.08■□□□□ 0.16
MDC1-209ENST00000613547 TDRD3Q9H7E2 651 aaKnown RBP16.08■□□□□ 0.16
MDC1-209ENST00000613547 PPP4R2Q9NY27 417 aa16.08■□□□□ 0.16
MDC1-209ENST00000613547 ZNF70Q9UC06 446 aaPredicted RBP16.08■□□□□ 0.16
MDC1-209ENST00000613547 PCDHAC2Q9Y5I4 1007 aa16.08■□□□□ 0.16
MDC1-209ENST00000613547 GAKO14976 1311 aa16.08■□□□□ 0.16
MDC1-209ENST00000613547 ASTN2O75129 1339 aaPredicted RBP16.08■□□□□ 0.16
MDC1-209ENST00000613547 CYP7A1P22680 504 aa16.07■□□□□ 0.16
MDC1-209ENST00000613547 TNNI2P48788 182 aa16.07■□□□□ 0.16
MDC1-209ENST00000613547 SLC9C2Q5TAH2 1124 aa16.07■□□□□ 0.16
MDC1-209ENST00000613547 APOBEC3HQ6NTF7 200 aaKnown RBP16.07■□□□□ 0.16
MDC1-209ENST00000613547 USP48Q86UV5 1035 aa16.07■□□□□ 0.16
MDC1-209ENST00000613547 CERS3Q8IU89 383 aa16.07■□□□□ 0.16
MDC1-209ENST00000613547 EDC3Q96F86 508 aaKnown RBP16.07■□□□□ 0.16
MDC1-209ENST00000613547 MAP4K4O95819 1239 aaPredicted RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms