RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 ABCF2Q9UG63 623 aa20.33■□□□□ 0.85
IRF1-211ENST00000613424 SERPINA10Q9UK55 444 aa20.33■□□□□ 0.85
IRF1-211ENST00000613424 ITGBL1O95965 494 aaPredicted RBP20.32■□□□□ 0.84
IRF1-211ENST00000613424 CRKP46108 304 aa20.32■□□□□ 0.84
IRF1-211ENST00000613424 HDLBPQ00341 1268 aaKnown RBP20.32■□□□□ 0.84
IRF1-211ENST00000613424 ANKRD45Q5TZF3 282 aa20.32■□□□□ 0.84
IRF1-211ENST00000613424 TBC1D9Q6ZT07 1266 aa20.32■□□□□ 0.84
IRF1-211ENST00000613424 PRMT6Q96LA8 375 aaPredicted RBP20.32■□□□□ 0.84
IRF1-211ENST00000613424 AKAP11Q9UKA4 1901 aa20.31■□□□□ 0.84
IRF1-211ENST00000613424 ZAP70P43403 619 aa20.31■□□□□ 0.84
IRF1-211ENST00000613424 ANGEL2Q5VTE6 544 aaKnown RBP20.31■□□□□ 0.84
IRF1-211ENST00000613424 SPTY2D1Q68D10 685 aaPredicted RBP20.31■□□□□ 0.84
IRF1-211ENST00000613424 MAST3O60307 1309 aa20.3■□□□□ 0.84
IRF1-211ENST00000613424 SPDYE2BA6NHP3 402 aa20.3■□□□□ 0.84
IRF1-211ENST00000613424 CYP2E1P05181 493 aaPredicted RBP20.3■□□□□ 0.84
IRF1-211ENST00000613424 SPDYE6P0CI01 402 aa20.3■□□□□ 0.84
IRF1-211ENST00000613424 ERICH6Q7L0X2 663 aa20.3■□□□□ 0.84
IRF1-211ENST00000613424 SMC5Q8IY18 1101 aa20.3■□□□□ 0.84
IRF1-211ENST00000613424 TEKT1Q969V4 418 aa20.3■□□□□ 0.84
IRF1-211ENST00000613424 DCPSQ96C86 337 aaKnown RBP20.3■□□□□ 0.84
IRF1-211ENST00000613424 GGA3Q9NZ52 723 aa20.3■□□□□ 0.84
IRF1-211ENST00000613424 POLR2AP24928 1970 aaKnown RBP20.29■□□□□ 0.84
IRF1-211ENST00000613424 HHIPL2Q6UWX4 724 aa20.29■□□□□ 0.84
IRF1-211ENST00000613424 CDC37L1Q7L3B6 337 aa20.29■□□□□ 0.84
IRF1-211ENST00000613424 USP48Q86UV5 1035 aa20.29■□□□□ 0.84
IRF1-211ENST00000613424 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.29■□□□□ 0.84
IRF1-211ENST00000613424 GLIS2Q9BZE0 524 aaPredicted RBP20.29■□□□□ 0.84
IRF1-211ENST00000613424 NDUFB9Q9Y6M9 179 aa20.29■□□□□ 0.84
IRF1-211ENST00000613424 ATP5JP18859 108 aa20.28■□□□□ 0.84
IRF1-211ENST00000613424 DIXDC1Q155Q3 683 aa20.28■□□□□ 0.84
IRF1-211ENST00000613424 LRP2BPQ9P2M1 347 aa20.28■□□□□ 0.84
IRF1-211ENST00000613424 ZBTB47Q9UFB7 747 aaPredicted RBP20.28■□□□□ 0.84
IRF1-211ENST00000613424 AOX1Q06278 1338 aa20.27■□□□□ 0.84
IRF1-211ENST00000613424 PASKQ96RG2 1323 aa20.27■□□□□ 0.84
IRF1-211ENST00000613424 B4GALNT3Q6L9W6 998 aa20.27■□□□□ 0.84
IRF1-211ENST00000613424 KRT26Q7Z3Y9 468 aa20.27■□□□□ 0.84
IRF1-211ENST00000613424 ZDHHC15Q96MV8 337 aa20.27■□□□□ 0.84
IRF1-211ENST00000613424 SCAF8Q9UPN6 1271 aaKnown RBP20.27■□□□□ 0.84
IRF1-211ENST00000613424 PITPNM2Q9BZ72 1349 aa20.27■□□□□ 0.83
IRF1-211ENST00000613424 TRAF5O00463 557 aa20.26■□□□□ 0.83
IRF1-211ENST00000613424 MYO1BO43795 1136 aa20.26■□□□□ 0.83
IRF1-211ENST00000613424 MECOMQ03112 1051 aa20.26■□□□□ 0.83
IRF1-211ENST00000613424 FMR1Q06787 632 aaKnown RBP eCLIP20.26■□□□□ 0.83
IRF1-211ENST00000613424 APOBEC3HQ6NTF7 200 aaKnown RBP20.26■□□□□ 0.83
IRF1-211ENST00000613424 DLK2Q6UY11 383 aa20.26■□□□□ 0.83
IRF1-211ENST00000613424 DZIP1Q86YF9 867 aaKnown RBP20.26■□□□□ 0.83
IRF1-211ENST00000613424 SULF1Q8IWU6 871 aa20.26■□□□□ 0.83
IRF1-211ENST00000613424 NSUN4Q96CB9 384 aaKnown RBP20.26■□□□□ 0.83
IRF1-211ENST00000613424 BOLA2Q9H3K6 86 aa20.26■□□□□ 0.83
IRF1-211ENST00000613424 ANTXR1Q9H6X2 564 aa20.26■□□□□ 0.83
IRF1-211ENST00000613424 TDRD3Q9H7E2 651 aaKnown RBP20.26■□□□□ 0.83
IRF1-211ENST00000613424 PIH1D3Q9NQM4 214 aaKnown RBP20.26■□□□□ 0.83
IRF1-211ENST00000613424 ECHDC1Q9NTX5 307 aa20.26■□□□□ 0.83
IRF1-211ENST00000613424 RAI14Q9P0K7 980 aa20.26■□□□□ 0.83
IRF1-211ENST00000613424 CLRN2A0PK11 232 aa20.25■□□□□ 0.83
IRF1-211ENST00000613424 ADM5C9JUS6 153 aa20.25■□□□□ 0.83
IRF1-211ENST00000613424 OTUD7AQ8TE49 926 aaPredicted RBP20.25■□□□□ 0.83
IRF1-211ENST00000613424 ZNF384Q8TF68 577 aa20.25■□□□□ 0.83
IRF1-211ENST00000613424 DNAJC2Q99543 621 aaKnown RBP20.25■□□□□ 0.83
IRF1-211ENST00000613424 DAGLAQ9Y4D2 1042 aa20.25■□□□□ 0.83
IRF1-211ENST00000613424 NUCB1Q02818 461 aa20.24■□□□□ 0.83
IRF1-211ENST00000613424 SPDYE2Q495Y8 402 aa20.24■□□□□ 0.83
IRF1-211ENST00000613424 SLF2Q8IX21 1173 aa20.24■□□□□ 0.83
IRF1-211ENST00000613424 FAM163AQ96GL9 167 aaPredicted RBP20.24■□□□□ 0.83
IRF1-211ENST00000613424 GPATCH3Q96I76 525 aa20.24■□□□□ 0.83
IRF1-211ENST00000613424 ZNF70Q9UC06 446 aaPredicted RBP20.24■□□□□ 0.83
IRF1-211ENST00000613424 HSPA6P17066 643 aa20.23■□□□□ 0.83
IRF1-211ENST00000613424 APLP1P51693 650 aa20.23■□□□□ 0.83
IRF1-211ENST00000613424 TSHZ3Q63HK5 1081 aa20.23■□□□□ 0.83
IRF1-211ENST00000613424 APOBEC3FQ8IUX4 373 aaKnown RBP20.23■□□□□ 0.83
IRF1-211ENST00000613424 HAUS7Q99871 368 aa20.23■□□□□ 0.83
IRF1-211ENST00000613424 LNPKQ9C0E8 428 aa20.23■□□□□ 0.83
IRF1-211ENST00000613424 VEZTQ9HBM0 779 aa20.23■□□□□ 0.83
IRF1-211ENST00000613424 MYH2Q9UKX2 1941 aa20.22■□□□□ 0.83
IRF1-211ENST00000613424 GOLIM4O00461 696 aa20.22■□□□□ 0.83
IRF1-211ENST00000613424 NEFLP07196 543 aa20.22■□□□□ 0.83
IRF1-211ENST00000613424 LDHCP07864 332 aa20.22■□□□□ 0.83
IRF1-211ENST00000613424 GSTO1P78417 241 aa20.22■□□□□ 0.83
IRF1-211ENST00000613424 TTF1Q15361 905 aaPredicted RBP20.22■□□□□ 0.83
IRF1-211ENST00000613424 CHD1LQ86WJ1 897 aa20.22■□□□□ 0.83
IRF1-211ENST00000613424 EDC3Q96F86 508 aaKnown RBP20.22■□□□□ 0.83
IRF1-211ENST00000613424 GAKO14976 1311 aa20.22■□□□□ 0.83
IRF1-211ENST00000613424 TTC41PQ6P2S7 1318 aa20.22■□□□□ 0.83
IRF1-211ENST00000613424 SALL3Q9BXA9 1300 aa20.22■□□□□ 0.83
IRF1-211ENST00000613424 MYO5AQ9Y4I1 1855 aaKnown RBP20.22■□□□□ 0.83
IRF1-211ENST00000613424 ECM29Q5VYK3 1845 aa20.21■□□□□ 0.83
IRF1-211ENST00000613424 IGSF3O75054 1194 aa20.21■□□□□ 0.83
IRF1-211ENST00000613424 IDH1O75874 414 aaKnown RBP20.21■□□□□ 0.83
IRF1-211ENST00000613424 MX1P20591 662 aa20.21■□□□□ 0.83
IRF1-211ENST00000613424 PAG1Q9NWQ8 432 aa20.21■□□□□ 0.83
IRF1-211ENST00000613424 MROH7-TTC4A0A0A0MT08 1334 aa20.21■□□□□ 0.83
IRF1-211ENST00000613424 PRAMEF18Q5VWM3 479 aa20.2■□□□□ 0.82
IRF1-211ENST00000613424 CST9Q5W186 159 aa20.2■□□□□ 0.82
IRF1-211ENST00000613424 NAA16Q6N069 864 aaPredicted RBP20.2■□□□□ 0.82
IRF1-211ENST00000613424 CDC42EP5Q6NZY7 148 aa20.2■□□□□ 0.82
IRF1-211ENST00000613424 DEFB129Q9H1M3 183 aa20.2■□□□□ 0.82
IRF1-211ENST00000613424 GPR75-ASB3A0A0A6YYF3 556 aa20.19■□□□□ 0.82
IRF1-211ENST00000613424 TCP10L2B9ZVM9 353 aa20.19■□□□□ 0.82
IRF1-211ENST00000613424 ERC2O15083 957 aa20.19■□□□□ 0.82
IRF1-211ENST00000613424 CELF2O95319 508 aaKnown RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms