RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 ASAP1Q9ULH1 1129 aa16.29■□□□□ 0.2
COL6A1-207ENST00000612273 FOXN1O15353 648 aa16.29■□□□□ 0.2
COL6A1-207ENST00000612273 SYKP43405 635 aa16.29■□□□□ 0.2
COL6A1-207ENST00000612273 METAP2P50579 478 aaKnown RBP eCLIP16.29■□□□□ 0.2
COL6A1-207ENST00000612273 DMTNQ08495 405 aa16.29■□□□□ 0.2
COL6A1-207ENST00000612273 MROH7-TTC4A0A0A0MT08 1334 aa16.29■□□□□ 0.2
COL6A1-207ENST00000612273 CYB5R4Q7L1T6 521 aa16.29■□□□□ 0.2
COL6A1-207ENST00000612273 VPS37DQ86XT2 251 aa16.29■□□□□ 0.2
COL6A1-207ENST00000612273 TBC1D10CQ8IV04 446 aa16.29■□□□□ 0.2
COL6A1-207ENST00000612273 CCDC191Q8NCU4 936 aa16.29■□□□□ 0.2
COL6A1-207ENST00000612273 GREM2Q9H772 168 aa16.29■□□□□ 0.2
COL6A1-207ENST00000612273 DHX16O60231 1041 aaKnown RBP16.28■□□□□ 0.2
COL6A1-207ENST00000612273 MCAMP43121 646 aa16.28■□□□□ 0.2
COL6A1-207ENST00000612273 CTDSPL2Q05D32 466 aa16.28■□□□□ 0.2
COL6A1-207ENST00000612273 KMT5BQ4FZB7 885 aa16.28■□□□□ 0.2
COL6A1-207ENST00000612273 SALL1Q9NSC2 1324 aa16.28■□□□□ 0.2
COL6A1-207ENST00000612273 CDC27P30260 824 aa16.28■□□□□ 0.2
COL6A1-207ENST00000612273 EVA1CP58658 441 aa16.28■□□□□ 0.2
COL6A1-207ENST00000612273 E4F1Q66K89 784 aaPredicted RBP16.28■□□□□ 0.2
COL6A1-207ENST00000612273 SARM1Q6SZW1 724 aa16.28■□□□□ 0.2
COL6A1-207ENST00000612273 KCNG4Q8TDN1 519 aa16.28■□□□□ 0.2
COL6A1-207ENST00000612273 SLC26A6Q9BXS9 759 aa16.28■□□□□ 0.2
COL6A1-207ENST00000612273 DNAI1Q9UI46 699 aa16.28■□□□□ 0.2
COL6A1-207ENST00000612273 CRYBG1Q9Y4K1 1723 aa16.28■□□□□ 0.2
COL6A1-207ENST00000612273 CAVIN2O95810 425 aa16.27■□□□□ 0.2
COL6A1-207ENST00000612273 KIF23Q02241 960 aaPredicted RBP16.27■□□□□ 0.2
COL6A1-207ENST00000612273 HLFQ16534 295 aa16.27■□□□□ 0.2
COL6A1-207ENST00000612273 hCG_1642624A0A1W2PR95 340 aa16.27■□□□□ 0.2
COL6A1-207ENST00000612273 KRT40Q6A162 431 aa16.27■□□□□ 0.2
COL6A1-207ENST00000612273 FBXO38Q6PIJ6 1188 aa16.27■□□□□ 0.2
COL6A1-207ENST00000612273 APPBP2Q92624 585 aa16.27■□□□□ 0.2
COL6A1-207ENST00000612273 EPC1Q9H2F5 836 aa16.27■□□□□ 0.2
COL6A1-207ENST00000612273 KCNJ14Q9UNX9 436 aa16.27■□□□□ 0.2
COL6A1-207ENST00000612273 TBC1D2BQ9UPU7 963 aa16.27■□□□□ 0.2
COL6A1-207ENST00000612273 TMEM232C9JQI7 657 aa16.27■□□□□ 0.19
COL6A1-207ENST00000612273 ITGA6P23229 1130 aa16.27■□□□□ 0.19
COL6A1-207ENST00000612273 FANCCQ00597 558 aa16.27■□□□□ 0.19
COL6A1-207ENST00000612273 MB21D2Q8IYB1 491 aaPredicted RBP16.27■□□□□ 0.19
COL6A1-207ENST00000612273 UTP14AQ9BVJ6 771 aaKnown RBP16.27■□□□□ 0.19
COL6A1-207ENST00000612273 AGXT2Q9BYV1 514 aa16.27■□□□□ 0.19
COL6A1-207ENST00000612273 ERICH4A6NGS2 130 aa16.26■□□□□ 0.19
COL6A1-207ENST00000612273 CREBRFQ8IUR6 639 aa16.26■□□□□ 0.19
COL6A1-207ENST00000612273 TRMT44Q8IYL2 757 aaKnown RBP16.26■□□□□ 0.19
COL6A1-207ENST00000612273 GRAMD1CQ8IYS0 662 aa16.26■□□□□ 0.19
COL6A1-207ENST00000612273 NUP133Q8WUM0 1156 aa16.26■□□□□ 0.19
COL6A1-207ENST00000612273 WWC3Q9ULE0 1092 aa16.26■□□□□ 0.19
COL6A1-207ENST00000612273 PHKA1P46020 1223 aa16.26■□□□□ 0.19
COL6A1-207ENST00000612273 UBASH3AP57075 661 aa16.26■□□□□ 0.19
COL6A1-207ENST00000612273 LMO7Q8WWI1 1683 aa16.25■□□□□ 0.19
COL6A1-207ENST00000612273 PIH1D3Q9NQM4 214 aaKnown RBP16.25■□□□□ 0.19
COL6A1-207ENST00000612273 C1orf167Q5SNV9 1468 aa16.25■□□□□ 0.19
COL6A1-207ENST00000612273 CDC25BP30305 580 aa16.25■□□□□ 0.19
COL6A1-207ENST00000612273 HSPA2P54652 639 aa16.25■□□□□ 0.19
COL6A1-207ENST00000612273 TPM4P67936 248 aa16.25■□□□□ 0.19
COL6A1-207ENST00000612273 PPP1R13BQ96KQ4 1090 aa16.25■□□□□ 0.19
COL6A1-207ENST00000612273 AKAP2Q9Y2D5 859 aa16.25■□□□□ 0.19
COL6A1-207ENST00000612273 ZNF532Q9HCE3 1301 aa16.25■□□□□ 0.19
COL6A1-207ENST00000612273 URI1O94763 535 aaPredicted RBP16.25■□□□□ 0.19
COL6A1-207ENST00000612273 TMEM67Q5HYA8 995 aa16.25■□□□□ 0.19
COL6A1-207ENST00000612273 AIDAQ96BJ3 306 aa16.25■□□□□ 0.19
COL6A1-207ENST00000612273 CGNQ9P2M7 1197 aaKnown RBP16.25■□□□□ 0.19
COL6A1-207ENST00000612273 TRMT112Q9UI30 125 aaKnown RBP16.25■□□□□ 0.19
COL6A1-207ENST00000612273 GOLGA8AA7E2F4 631 aa16.24■□□□□ 0.19
COL6A1-207ENST00000612273 GRIN1Q05586 938 aa16.24■□□□□ 0.19
COL6A1-207ENST00000612273 TCIRG1Q13488 830 aa16.24■□□□□ 0.19
COL6A1-207ENST00000612273 TRIM29Q14134 588 aa16.24■□□□□ 0.19
COL6A1-207ENST00000612273 AXDND1Q5T1B0 1012 aaPredicted RBP16.24■□□□□ 0.19
COL6A1-207ENST00000612273 NYAP1Q6ZVC0 841 aa16.24■□□□□ 0.19
COL6A1-207ENST00000612273 MIGA1Q8NAN2 632 aa16.24■□□□□ 0.19
COL6A1-207ENST00000612273 FANCLQ9NW38 375 aa16.24■□□□□ 0.19
COL6A1-207ENST00000612273 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.24■□□□□ 0.19
COL6A1-207ENST00000612273 FER1L4A9Z1Z3 1794 aa16.24■□□□□ 0.19
COL6A1-207ENST00000612273 RGPD5Q99666 1765 aa16.24■□□□□ 0.19
COL6A1-207ENST00000612273 CDK11BP21127 795 aaKnown RBP16.24■□□□□ 0.19
COL6A1-207ENST00000612273 IARSP41252 1262 aaKnown RBP16.24■□□□□ 0.19
COL6A1-207ENST00000612273 RBM6P78332 1123 aaKnown RBP16.24■□□□□ 0.19
COL6A1-207ENST00000612273 LONRF3Q496Y0 759 aa16.24■□□□□ 0.19
COL6A1-207ENST00000612273 SHC4Q6S5L8 630 aa16.24■□□□□ 0.19
COL6A1-207ENST00000612273 KIF6Q6ZMV9 814 aa16.24■□□□□ 0.19
COL6A1-207ENST00000612273 CNNM3Q8NE01 707 aa16.24■□□□□ 0.19
COL6A1-207ENST00000612273 TMOD3Q9NYL9 352 aa16.24■□□□□ 0.19
COL6A1-207ENST00000612273 ANGEL1Q9UNK9 670 aaKnown RBP16.24■□□□□ 0.19
COL6A1-207ENST00000612273 TMEM94Q12767 1356 aa16.24■□□□□ 0.19
COL6A1-207ENST00000612273 BTBD18B2RXH4 712 aa16.23■□□□□ 0.19
COL6A1-207ENST00000612273 IFIT3O14879 490 aaKnown RBP16.23■□□□□ 0.19
COL6A1-207ENST00000612273 COBLO75128 1261 aa16.23■□□□□ 0.19
COL6A1-207ENST00000612273 GUCY1A2P33402 732 aa16.23■□□□□ 0.19
COL6A1-207ENST00000612273 NBPF3Q9H094 633 aa16.23■□□□□ 0.19
COL6A1-207ENST00000612273 N4BP2Q86UW6 1770 aaPredicted RBP16.23■□□□□ 0.19
COL6A1-207ENST00000612273 PRKAB2O43741 272 aa16.23■□□□□ 0.19
COL6A1-207ENST00000612273 NEMFO60524 1076 aa16.23■□□□□ 0.19
COL6A1-207ENST00000612273 SLU7O95391 586 aaKnown RBP16.23■□□□□ 0.19
COL6A1-207ENST00000612273 NLRP12P59046 1061 aa16.23■□□□□ 0.19
COL6A1-207ENST00000612273 KLHL10Q6JEL2 608 aa16.23■□□□□ 0.19
COL6A1-207ENST00000612273 ZSWIM4Q9H7M6 989 aa16.23■□□□□ 0.19
COL6A1-207ENST00000612273 ARMT1Q9H993 441 aa16.23■□□□□ 0.19
COL6A1-207ENST00000612273 POLR3EQ9NVU0 708 aa16.23■□□□□ 0.19
COL6A1-207ENST00000612273 ZBTB43O43298 467 aa16.23■□□□□ 0.19
COL6A1-207ENST00000612273 LRRFIP1Q32MZ4 808 aaKnown RBP16.23■□□□□ 0.19
COL6A1-207ENST00000612273 APOA5Q6Q788 366 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms