RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 ZBTB7BO15156 539 aaPredicted RBP15.21■□□□□ 0.03
CBWD3-208ENST00000612050 ZNF157P51786 506 aaPredicted RBP15.21■□□□□ 0.03
CBWD3-208ENST00000612050 ATP8B2P98198 1209 aa15.21■□□□□ 0.03
CBWD3-208ENST00000612050 NOGQ13253 232 aa15.21■□□□□ 0.03
CBWD3-208ENST00000612050 SUPT20HL1Q3ZLR7 823 aa15.21■□□□□ 0.03
CBWD3-208ENST00000612050 RGMBQ6NW40 437 aa15.21■□□□□ 0.03
CBWD3-208ENST00000612050 PAPPA2Q9BXP8 1791 aa15.21■□□□□ 0.02
CBWD3-208ENST00000612050 PNMA6EA0A0J9YXQ4 647 aa15.2■□□□□ 0.02
CBWD3-208ENST00000612050 ZBTB22O15209 634 aa15.2■□□□□ 0.02
CBWD3-208ENST00000612050 HMMRO75330 724 aa15.2■□□□□ 0.02
CBWD3-208ENST00000612050 SURF6O75683 361 aaKnown RBP15.2■□□□□ 0.02
CBWD3-208ENST00000612050 CRKP46108 304 aa15.2■□□□□ 0.02
CBWD3-208ENST00000612050 TFCP2Q12800 502 aa15.2■□□□□ 0.02
CBWD3-208ENST00000612050 SLF2Q8IX21 1173 aa15.2■□□□□ 0.02
CBWD3-208ENST00000612050 PANK1Q8TE04 598 aa15.2■□□□□ 0.02
CBWD3-208ENST00000612050 CLRN2A0PK11 232 aa15.19■□□□□ 0.02
CBWD3-208ENST00000612050 PPP1R12BO60237 982 aaPredicted RBP15.19■□□□□ 0.02
CBWD3-208ENST00000612050 LDHBP07195 334 aaKnown RBP15.19■□□□□ 0.02
CBWD3-208ENST00000612050 RLBP1P12271 317 aa15.19■□□□□ 0.02
CBWD3-208ENST00000612050 HSP90AB4PQ58FF6 505 aa15.19■□□□□ 0.02
CBWD3-208ENST00000612050 SPTY2D1Q68D10 685 aaPredicted RBP15.19■□□□□ 0.02
CBWD3-208ENST00000612050 CCDC102BQ68D86 513 aa15.19■□□□□ 0.02
CBWD3-208ENST00000612050 ERC1Q8IUD2 1116 aa15.19■□□□□ 0.02
CBWD3-208ENST00000612050 DEFB129Q9H1M3 183 aa15.19■□□□□ 0.02
CBWD3-208ENST00000612050 C1orf115Q9H7X2 142 aa15.19■□□□□ 0.02
CBWD3-208ENST00000612050 CTCFP49711 727 aaPredicted RBP15.18■□□□□ 0.02
CBWD3-208ENST00000612050 TIMM10P62072 90 aa15.18■□□□□ 0.02
CBWD3-208ENST00000612050 SSH3Q8TE77 659 aa15.18■□□□□ 0.02
CBWD3-208ENST00000612050 XAGE2Q96GT9 111 aa15.18■□□□□ 0.02
CBWD3-208ENST00000612050 ZBED3Q96IU2 234 aaPredicted RBP15.18■□□□□ 0.02
CBWD3-208ENST00000612050 PRMT6Q96LA8 375 aaPredicted RBP15.18■□□□□ 0.02
CBWD3-208ENST00000612050 MRIQ9BWK5 157 aa15.18■□□□□ 0.02
CBWD3-208ENST00000612050 CA12O43570 354 aa15.17■□□□□ 0.02
CBWD3-208ENST00000612050 UQCRFS1P1P0C7P4 283 aa15.17■□□□□ 0.02
CBWD3-208ENST00000612050 PHKA1P46020 1223 aa15.17■□□□□ 0.02
CBWD3-208ENST00000612050 POLA2Q14181 598 aa15.17■□□□□ 0.02
CBWD3-208ENST00000612050 CCDC158Q5M9N0 1113 aa15.17■□□□□ 0.02
CBWD3-208ENST00000612050 REM2Q8IYK8 340 aaPredicted RBP15.17■□□□□ 0.02
CBWD3-208ENST00000612050 HOOK2Q96ED9 719 aa15.17■□□□□ 0.02
CBWD3-208ENST00000612050 PDE3AQ14432 1141 aa15.17■□□□□ 0.02
CBWD3-208ENST00000612050 SPDYE2Q495Y8 402 aa15.17■□□□□ 0.02
CBWD3-208ENST00000612050 HHIPL2Q6UWX4 724 aa15.17■□□□□ 0.02
CBWD3-208ENST00000612050 DLK2Q6UY11 383 aa15.17■□□□□ 0.02
CBWD3-208ENST00000612050 DZIP1Q86YF9 867 aaKnown RBP15.17■□□□□ 0.02
CBWD3-208ENST00000612050 TDRD3Q9H7E2 651 aaKnown RBP15.17■□□□□ 0.02
CBWD3-208ENST00000612050 GPR108Q9NPR9 543 aa15.17■□□□□ 0.02
CBWD3-208ENST00000612050 ZNF70Q9UC06 446 aaPredicted RBP15.17■□□□□ 0.02
CBWD3-208ENST00000612050 SCAF8Q9UPN6 1271 aaKnown RBP15.17■□□□□ 0.02
CBWD3-208ENST00000612050 COG6Q9Y2V7 657 aa15.17■□□□□ 0.02
CBWD3-208ENST00000612050 PDS5AQ29RF7 1337 aaKnown RBP15.16■□□□□ 0.02
CBWD3-208ENST00000612050 SALL1Q9NSC2 1324 aa15.16■□□□□ 0.02
CBWD3-208ENST00000612050 TTC39AQ5SRH9 613 aa15.16■□□□□ 0.02
CBWD3-208ENST00000612050 PRAMEF18Q5VWM3 479 aa15.16■□□□□ 0.02
CBWD3-208ENST00000612050 RPAP2Q8IXW5 612 aaPredicted RBP15.16■□□□□ 0.02
CBWD3-208ENST00000612050 YTHDC1Q96MU7 727 aaKnown RBP15.16■□□□□ 0.02
CBWD3-208ENST00000612050 ZDHHC15Q96MV8 337 aa15.16■□□□□ 0.02
CBWD3-208ENST00000612050 ABCF2Q9UG63 623 aa15.16■□□□□ 0.02
CBWD3-208ENST00000612050 THSD7BQ9C0I4 1608 aa15.15■□□□□ 0.02
CBWD3-208ENST00000612050 ADORA1P30542 326 aa15.15■□□□□ 0.02
CBWD3-208ENST00000612050 IREB2P48200 963 aaKnown RBP15.15■□□□□ 0.02
CBWD3-208ENST00000612050 PRKG1Q13976 671 aa15.15■□□□□ 0.02
CBWD3-208ENST00000612050 RASA3Q14644 834 aa15.15■□□□□ 0.02
CBWD3-208ENST00000612050 CEP85Q6P2H3 762 aa15.15■□□□□ 0.02
CBWD3-208ENST00000612050 WBP1LQ9NX94 342 aa15.15■□□□□ 0.02
CBWD3-208ENST00000612050 ANGEL1Q9UNK9 670 aaKnown RBP15.15■□□□□ 0.02
CBWD3-208ENST00000612050 TCP10L2B9ZVM9 353 aa15.14■□□□□ 0.01
CBWD3-208ENST00000612050 AOC2O75106 756 aa15.14■□□□□ 0.01
CBWD3-208ENST00000612050 GSTO1P78417 241 aa15.14■□□□□ 0.01
CBWD3-208ENST00000612050 TNNI3KQ59H18 835 aa15.14■□□□□ 0.01
CBWD3-208ENST00000612050 ERICH6Q7L0X2 663 aa15.14■□□□□ 0.01
CBWD3-208ENST00000612050 FOXD4L1Q9NU39 408 aa15.14■□□□□ 0.01
CBWD3-208ENST00000612050 NOP58Q9Y2X3 529 aaKnown RBP15.14■□□□□ 0.01
CBWD3-208ENST00000612050 FPGT-TNNI3KV9GXZ4 949 aa15.14■□□□□ 0.01
CBWD3-208ENST00000612050 UNCXA6NJT0 531 aa15.13■□□□□ 0.01
CBWD3-208ENST00000612050 UBE2Q2LH0YL09 131 aa15.13■□□□□ 0.01
CBWD3-208ENST00000612050 SLC10A3P09131 477 aa15.13■□□□□ 0.01
CBWD3-208ENST00000612050 RASGRF1Q13972 1273 aa15.13■□□□□ 0.01
CBWD3-208ENST00000612050 NOL10Q9BSC4 688 aaKnown RBP15.13■□□□□ 0.01
CBWD3-208ENST00000612050 PCDHAC2Q9Y5I4 1007 aa15.13■□□□□ 0.01
CBWD3-208ENST00000612050 FOXN1O15353 648 aa15.12■□□□□ 0.01
CBWD3-208ENST00000612050 LDHCP07864 332 aa15.12■□□□□ 0.01
CBWD3-208ENST00000612050 PRDX5P30044 214 aa15.12■□□□□ 0.01
CBWD3-208ENST00000612050 FKBP1CQ5VVH2 108 aa15.12■□□□□ 0.01
CBWD3-208ENST00000612050 SPATA5Q8NB90 893 aa15.12■□□□□ 0.01
CBWD3-208ENST00000612050 ARID4AP29374 1257 aaPredicted RBP15.11■□□□□ 0.01
CBWD3-208ENST00000612050 FAM83AQ86UY5 434 aa15.11■□□□□ 0.01
CBWD3-208ENST00000612050 SLC10A4Q96EP9 437 aa15.11■□□□□ 0.01
CBWD3-208ENST00000612050 PRDM10Q9NQV6 1147 aa15.11■□□□□ 0.01
CBWD3-208ENST00000612050 LRP2BPQ9P2M1 347 aa15.11■□□□□ 0.01
CBWD3-208ENST00000612050 KIF23Q02241 960 aaPredicted RBP15.1■□□□□ 0.01
CBWD3-208ENST00000612050 SREBF2Q12772 1141 aa15.1■□□□□ 0.01
CBWD3-208ENST00000612050 GRIK5Q16478 980 aa15.1■□□□□ 0.01
CBWD3-208ENST00000612050 DCAF15Q66K64 600 aa15.1■□□□□ 0.01
CBWD3-208ENST00000612050 RASAL3Q86YV0 1011 aa15.1■□□□□ 0.01
CBWD3-208ENST00000612050 ANKRD13AQ8IZ07 590 aa15.1■□□□□ 0.01
CBWD3-208ENST00000612050 CLASRPQ8N2M8 674 aaKnown RBP15.1■□□□□ 0.01
CBWD3-208ENST00000612050 RNF39Q9H2S5 420 aa15.1■□□□□ 0.01
CBWD3-208ENST00000612050 ZBTB40Q9NUA8 1239 aa15.1■□□□□ 0.01
CBWD3-208ENST00000612050 RAI14Q9P0K7 980 aa15.1■□□□□ 0.01
CBWD3-208ENST00000612050 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms