RNA–Protein interactions for RNA: ENST00000611963.4

TARDBP-213, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-213ENST00000611963 RNF181Q9P0P0 153 aa9.77□□□□□ -0.85
TARDBP-213ENST00000611963 HMG20BQ9P0W2 317 aa9.77□□□□□ -0.85
TARDBP-213ENST00000611963 ANKIB1Q9P2G1 1089 aa9.77□□□□□ -0.85
TARDBP-213ENST00000611963 IQSEC3Q9UPP2 1182 aaPredicted RBP9.77□□□□□ -0.85
TARDBP-213ENST00000611963 COL1A1P02452 1464 aaPredicted RBP9.77□□□□□ -0.85
TARDBP-213ENST00000611963 ZNF804BA4D1E1 1349 aa9.77□□□□□ -0.85
TARDBP-213ENST00000611963 EIF5BO60841 1220 aaKnown RBP9.76□□□□□ -0.85
TARDBP-213ENST00000611963 BBOX1O75936 387 aa9.76□□□□□ -0.85
TARDBP-213ENST00000611963 CYP2E1P05181 493 aaPredicted RBP9.76□□□□□ -0.85
TARDBP-213ENST00000611963 RBM25P49756 843 aaKnown RBP9.76□□□□□ -0.85
TARDBP-213ENST00000611963 OLFM4Q6UX06 510 aa9.76□□□□□ -0.85
TARDBP-213ENST00000611963 CCDC129Q6ZRS4 1044 aa9.76□□□□□ -0.85
TARDBP-213ENST00000611963 TXNRD3Q86VQ6 643 aa9.76□□□□□ -0.85
TARDBP-213ENST00000611963 CNKSR1Q969H4 720 aa9.76□□□□□ -0.85
TARDBP-213ENST00000611963 FAM84BQ96KN1 310 aaPredicted RBP9.76□□□□□ -0.85
TARDBP-213ENST00000611963 LSG1Q9H089 658 aaKnown RBP9.76□□□□□ -0.85
TARDBP-213ENST00000611963 NMRK2Q9NPI5 230 aa9.76□□□□□ -0.85
TARDBP-213ENST00000611963 FER1L6Q2WGJ9 1857 aa9.76□□□□□ -0.85
TARDBP-213ENST00000611963 CCDC88AQ3V6T2 1871 aa9.76□□□□□ -0.85
TARDBP-213ENST00000611963 XDHP47989 1333 aa9.76□□□□□ -0.85
TARDBP-213ENST00000611963 IRS2Q9Y4H2 1338 aa9.76□□□□□ -0.85
TARDBP-213ENST00000611963 MED23Q9ULK4 1368 aa9.75□□□□□ -0.85
TARDBP-213ENST00000611963 RNF113AO15541 343 aaKnown RBP9.75□□□□□ -0.85
TARDBP-213ENST00000611963 UFL1O94874 794 aa9.75□□□□□ -0.85
TARDBP-213ENST00000611963 LMNB1P20700 586 aa9.75□□□□□ -0.85
TARDBP-213ENST00000611963 PTH1RQ03431 593 aa9.75□□□□□ -0.85
TARDBP-213ENST00000611963 FBXO33Q7Z6M2 555 aa9.75□□□□□ -0.85
TARDBP-213ENST00000611963 ZNF589Q86UQ0 364 aaPredicted RBP9.75□□□□□ -0.85
TARDBP-213ENST00000611963 VPS37DQ86XT2 251 aa9.75□□□□□ -0.85
TARDBP-213ENST00000611963 SPATA5Q8NB90 893 aa9.75□□□□□ -0.85
TARDBP-213ENST00000611963 SEC62Q99442 399 aaKnown RBP9.75□□□□□ -0.85
TARDBP-213ENST00000611963 GGA1Q9UJY5 639 aa9.75□□□□□ -0.85
TARDBP-213ENST00000611963 LEMD3Q9Y2U8 911 aa9.75□□□□□ -0.85
TARDBP-213ENST00000611963 RAD50Q92878 1312 aa9.75□□□□□ -0.85
TARDBP-213ENST00000611963 SNED1Q8TER0 1413 aa9.74□□□□□ -0.85
TARDBP-213ENST00000611963 M0R2C6 588 aa9.74□□□□□ -0.85
TARDBP-213ENST00000611963 CAVIN4Q5BKX8 364 aa9.74□□□□□ -0.85
TARDBP-213ENST00000611963 ZMYM1Q5SVZ6 1142 aa9.74□□□□□ -0.85
TARDBP-213ENST00000611963 KIAA1211Q6ZU35 1233 aa9.74□□□□□ -0.85
TARDBP-213ENST00000611963 IPO9Q96P70 1041 aaKnown RBP9.74□□□□□ -0.85
TARDBP-213ENST00000611963 KIF2CQ99661 725 aa9.74□□□□□ -0.85
TARDBP-213ENST00000611963 MFRPQ9BY79 579 aa9.74□□□□□ -0.85
TARDBP-213ENST00000611963 GNL3LQ9NVN8 582 aaKnown RBP9.74□□□□□ -0.85
TARDBP-213ENST00000611963 TAOK2Q9UL54 1235 aa9.74□□□□□ -0.85
TARDBP-213ENST00000611963 NSFL1CQ9UNZ2 370 aaKnown RBP9.74□□□□□ -0.85
TARDBP-213ENST00000611963 ATP6V0A2Q9Y487 856 aa9.74□□□□□ -0.85
TARDBP-213ENST00000611963 DUOX1Q9NRD9 1551 aa9.74□□□□□ -0.85
TARDBP-213ENST00000611963 CCDC171Q6TFL3 1326 aa9.74□□□□□ -0.85
TARDBP-213ENST00000611963 LTBP3Q9NS15 1303 aa9.74□□□□□ -0.85
TARDBP-213ENST00000611963 TIAM2Q8IVF5 1701 aa9.73□□□□□ -0.85
TARDBP-213ENST00000611963 IDH1O75874 414 aaKnown RBP9.73□□□□□ -0.85
TARDBP-213ENST00000611963 ATP2B4P23634 1241 aa9.73□□□□□ -0.85
TARDBP-213ENST00000611963 ALDH1B1P30837 517 aa9.73□□□□□ -0.85
TARDBP-213ENST00000611963 HIBADHP31937 336 aaKnown RBP9.73□□□□□ -0.85
TARDBP-213ENST00000611963 CHAF1AQ13111 956 aaPredicted RBP9.73□□□□□ -0.85
TARDBP-213ENST00000611963 TTF1Q15361 905 aaPredicted RBP9.73□□□□□ -0.85
TARDBP-213ENST00000611963 WASHC4Q2M389 1173 aa9.73□□□□□ -0.85
TARDBP-213ENST00000611963 MCMDC2Q4G0Z9 681 aa9.73□□□□□ -0.85
TARDBP-213ENST00000611963 TMC4Q7Z404 712 aa9.73□□□□□ -0.85
TARDBP-213ENST00000611963 SP8Q8IXZ3 490 aa9.73□□□□□ -0.85
TARDBP-213ENST00000611963 TBC1D16Q8TBP0 767 aa9.73□□□□□ -0.85
TARDBP-213ENST00000611963 OSBP2Q969R2 916 aa9.73□□□□□ -0.85
TARDBP-213ENST00000611963 DDRGK1Q96HY6 314 aa9.73□□□□□ -0.85
TARDBP-213ENST00000611963 POLLQ9UGP5 575 aa9.73□□□□□ -0.85
TARDBP-213ENST00000611963 PALD1Q9ULE6 856 aa9.73□□□□□ -0.85
TARDBP-213ENST00000611963 JAG2Q9Y219 1238 aa9.73□□□□□ -0.85
TARDBP-213ENST00000611963 MAST3O60307 1309 aa9.73□□□□□ -0.85
TARDBP-213ENST00000611963 ZC3H4Q9UPT8 1303 aaKnown RBP9.73□□□□□ -0.85
TARDBP-213ENST00000611963 MAST2Q6P0Q8 1798 aa9.73□□□□□ -0.85
TARDBP-213ENST00000611963 LAMA4Q16363 1823 aa9.72□□□□□ -0.85
TARDBP-213ENST00000611963 MYH2Q9UKX2 1941 aa9.72□□□□□ -0.85
TARDBP-213ENST00000611963 C6orf229H3BNL8 230 aa9.72□□□□□ -0.85
TARDBP-213ENST00000611963 FRAT2O75474 233 aaPredicted RBP9.72□□□□□ -0.85
TARDBP-213ENST00000611963 PDE6AP16499 860 aa9.72□□□□□ -0.85
TARDBP-213ENST00000611963 MCCP23508 829 aa9.72□□□□□ -0.85
TARDBP-213ENST00000611963 ADD2P35612 726 aa9.72□□□□□ -0.85
TARDBP-213ENST00000611963 SLC4A3P48751 1232 aa9.72□□□□□ -0.85
TARDBP-213ENST00000611963 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.72□□□□□ -0.852e-12■□□□□ 8.7
TARDBP-213ENST00000611963 TAOK3Q9H2K8 898 aa9.72□□□□□ -0.85
TARDBP-213ENST00000611963 HELLSQ9NRZ9 838 aa9.72□□□□□ -0.85
TARDBP-213ENST00000611963 PODXL2Q9NZ53 605 aa9.72□□□□□ -0.85
TARDBP-213ENST00000611963 DENND2AQ9ULE3 1009 aa9.72□□□□□ -0.85
TARDBP-213ENST00000611963 RBM8AQ9Y5S9 174 aaKnown RBP9.72□□□□□ -0.85
TARDBP-213ENST00000611963 GLTPD2A6NH11 291 aa9.71□□□□□ -0.86
TARDBP-213ENST00000611963 TOMM70O94826 608 aa9.71□□□□□ -0.86
TARDBP-213ENST00000611963 ZFYP08048 801 aaPredicted RBP9.71□□□□□ -0.86
TARDBP-213ENST00000611963 LRRFIP1Q32MZ4 808 aaKnown RBP9.71□□□□□ -0.86
TARDBP-213ENST00000611963 CCDC93Q567U6 631 aa9.71□□□□□ -0.86
TARDBP-213ENST00000611963 SLC9C2Q5TAH2 1124 aa9.71□□□□□ -0.86
TARDBP-213ENST00000611963 C15orf52Q6ZUT6 534 aaKnown RBP9.71□□□□□ -0.86
TARDBP-213ENST00000611963 ZNF804AQ7Z570 1209 aa9.71□□□□□ -0.86
TARDBP-213ENST00000611963 MPNDQ8N594 471 aa9.71□□□□□ -0.86
TARDBP-213ENST00000611963 MAGEB6Q8N7X4 407 aa9.71□□□□□ -0.86
TARDBP-213ENST00000611963 APPBP2Q92624 585 aa9.71□□□□□ -0.86
TARDBP-213ENST00000611963 RRAGCQ9HB90 399 aa9.71□□□□□ -0.86
TARDBP-213ENST00000611963 SCUBE2Q9NQ36 999 aa9.71□□□□□ -0.86
TARDBP-213ENST00000611963 ABCF2Q9UG63 623 aa9.71□□□□□ -0.86
TARDBP-213ENST00000611963 BAZ2AQ9UIF9 1905 aaKnown RBP9.71□□□□□ -0.86
TARDBP-213ENST00000611963 SCN9AQ15858 1988 aa9.71□□□□□ -0.86
TARDBP-213ENST00000611963 ZNF532Q9HCE3 1301 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms