RNA–Protein interactions for RNA: ENST00000610454.4

SENP3-209, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-209ENST00000610454 PRMT6Q96LA8 375 aaPredicted RBP16.53■□□□□ 0.24
SENP3-209ENST00000610454 BEGAINQ9BUH8 593 aa16.53■□□□□ 0.24
SENP3-209ENST00000610454 COG6Q9Y2V7 657 aa16.53■□□□□ 0.24
SENP3-209ENST00000610454 ADORA1P30542 326 aa16.52■□□□□ 0.24
SENP3-209ENST00000610454 HDLBPQ00341 1268 aaKnown RBP16.52■□□□□ 0.24
SENP3-209ENST00000610454 TNFAIP1Q13829 316 aa16.52■□□□□ 0.24
SENP3-209ENST00000610454 POLA2Q14181 598 aa16.52■□□□□ 0.24
SENP3-209ENST00000610454 PRAMEF18Q5VWM3 479 aa16.52■□□□□ 0.24
SENP3-209ENST00000610454 CCDC102BQ68D86 513 aa16.52■□□□□ 0.24
SENP3-209ENST00000610454 ZGPATQ8N5A5 531 aaKnown RBP16.52■□□□□ 0.24
SENP3-209ENST00000610454 XAGE2Q96GT9 111 aa16.52■□□□□ 0.24
SENP3-209ENST00000610454 PCDHAC2Q9Y5I4 1007 aa16.52■□□□□ 0.24
SENP3-209ENST00000610454 PPP2R3BQ9Y5P8 575 aa16.52■□□□□ 0.24
SENP3-209ENST00000610454 ZNF157P51786 506 aaPredicted RBP16.51■□□□□ 0.23
SENP3-209ENST00000610454 RGMBQ6NW40 437 aa16.51■□□□□ 0.23
SENP3-209ENST00000610454 DEFB129Q9H1M3 183 aa16.51■□□□□ 0.23
SENP3-209ENST00000610454 TMOD2Q9NZR1 351 aa16.51■□□□□ 0.23
SENP3-209ENST00000610454 THSD7BQ9C0I4 1608 aa16.5■□□□□ 0.23
SENP3-209ENST00000610454 LDHBP07195 334 aaKnown RBP16.5■□□□□ 0.23
SENP3-209ENST00000610454 MAP2K2P36507 400 aa16.5■□□□□ 0.23
SENP3-209ENST00000610454 TNNI2P48788 182 aa16.5■□□□□ 0.23
SENP3-209ENST00000610454 NOGQ13253 232 aa16.5■□□□□ 0.23
SENP3-209ENST00000610454 PDE3AQ14432 1141 aa16.5■□□□□ 0.23
SENP3-209ENST00000610454 CEP85Q6P2H3 762 aa16.5■□□□□ 0.23
SENP3-209ENST00000610454 ARMC9Q7Z3E5 817 aa16.5■□□□□ 0.23
SENP3-209ENST00000610454 CCDC102AQ96A19 550 aa16.5■□□□□ 0.23
SENP3-209ENST00000610454 TDRD3Q9H7E2 651 aaKnown RBP16.5■□□□□ 0.23
SENP3-209ENST00000610454 HMMRO75330 724 aa16.49■□□□□ 0.23
SENP3-209ENST00000610454 GRIK5Q16478 980 aa16.49■□□□□ 0.23
SENP3-209ENST00000610454 SUPT20HL1Q3ZLR7 823 aa16.49■□□□□ 0.23
SENP3-209ENST00000610454 SPDYE2Q495Y8 402 aa16.49■□□□□ 0.23
SENP3-209ENST00000610454 ZNF70Q9UC06 446 aaPredicted RBP16.49■□□□□ 0.23
SENP3-209ENST00000610454 SALL1Q9NSC2 1324 aa16.48■□□□□ 0.23
SENP3-209ENST00000610454 AOC2O75106 756 aa16.48■□□□□ 0.23
SENP3-209ENST00000610454 RASGRF1Q13972 1273 aa16.48■□□□□ 0.23
SENP3-209ENST00000610454 HSP90AB4PQ58FF6 505 aa16.48■□□□□ 0.23
SENP3-209ENST00000610454 ERC1Q8IUD2 1116 aa16.48■□□□□ 0.23
SENP3-209ENST00000610454 ZDHHC15Q96MV8 337 aa16.48■□□□□ 0.23
SENP3-209ENST00000610454 MRIQ9BWK5 157 aa16.48■□□□□ 0.23
SENP3-209ENST00000610454 PDS5AQ29RF7 1337 aaKnown RBP16.47■□□□□ 0.23
SENP3-209ENST00000610454 PPP1R12BO60237 982 aaPredicted RBP16.47■□□□□ 0.23
SENP3-209ENST00000610454 UQCRFS1P1P0C7P4 283 aa16.47■□□□□ 0.23
SENP3-209ENST00000610454 PRDX5P30044 214 aa16.47■□□□□ 0.23
SENP3-209ENST00000610454 PRKG1Q13976 671 aa16.47■□□□□ 0.23
SENP3-209ENST00000610454 RASA3Q14644 834 aa16.47■□□□□ 0.23
SENP3-209ENST00000610454 TNNI3KQ59H18 835 aa16.47■□□□□ 0.23
SENP3-209ENST00000610454 CCDC158Q5M9N0 1113 aa16.47■□□□□ 0.23
SENP3-209ENST00000610454 SPTY2D1Q68D10 685 aaPredicted RBP16.47■□□□□ 0.23
SENP3-209ENST00000610454 HHIPL2Q6UWX4 724 aa16.47■□□□□ 0.23
SENP3-209ENST00000610454 DZIP1Q86YF9 867 aaKnown RBP16.47■□□□□ 0.23
SENP3-209ENST00000610454 RPAP2Q8IXW5 612 aaPredicted RBP16.47■□□□□ 0.23
SENP3-209ENST00000610454 GPR108Q9NPR9 543 aa16.47■□□□□ 0.23
SENP3-209ENST00000610454 WBP1LQ9NX94 342 aa16.47■□□□□ 0.23
SENP3-209ENST00000610454 ABCF2Q9UG63 623 aa16.47■□□□□ 0.23
SENP3-209ENST00000610454 NOP58Q9Y2X3 529 aaKnown RBP16.47■□□□□ 0.23
SENP3-209ENST00000610454 FPGT-TNNI3KV9GXZ4 949 aa16.47■□□□□ 0.23
SENP3-209ENST00000610454 TCP10L2B9ZVM9 353 aa16.46■□□□□ 0.23
SENP3-209ENST00000610454 UBE2Q2LH0YL09 131 aa16.46■□□□□ 0.23
SENP3-209ENST00000610454 ZBTB22O15209 634 aa16.46■□□□□ 0.23
SENP3-209ENST00000610454 TTC39AQ5SRH9 613 aa16.46■□□□□ 0.23
SENP3-209ENST00000610454 SLF2Q8IX21 1173 aa16.46■□□□□ 0.23
SENP3-209ENST00000610454 ZBTB40Q9NUA8 1239 aa16.46■□□□□ 0.23
SENP3-209ENST00000610454 ANGEL1Q9UNK9 670 aaKnown RBP16.46■□□□□ 0.23
SENP3-209ENST00000610454 AOX1Q06278 1338 aa16.45■□□□□ 0.22
SENP3-209ENST00000610454 FOXN1O15353 648 aa16.45■□□□□ 0.22
SENP3-209ENST00000610454 SLC10A3P09131 477 aa16.45■□□□□ 0.22
SENP3-209ENST00000610454 CTCFP49711 727 aaPredicted RBP16.45■□□□□ 0.22
SENP3-209ENST00000610454 MOB2Q70IA6 237 aa16.45■□□□□ 0.22
SENP3-209ENST00000610454 SPATA5Q8NB90 893 aa16.45■□□□□ 0.22
SENP3-209ENST00000610454 EXOC6BQ9Y2D4 811 aa16.45■□□□□ 0.22
SENP3-209ENST00000610454 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.45■□□□□ 0.22
SENP3-209ENST00000610454 MYH2Q9UKX2 1941 aa16.45■□□□□ 0.22
SENP3-209ENST00000610454 ARID4AP29374 1257 aaPredicted RBP16.44■□□□□ 0.22
SENP3-209ENST00000610454 DIXDC1Q155Q3 683 aa16.44■□□□□ 0.22
SENP3-209ENST00000610454 ERICH6Q7L0X2 663 aa16.44■□□□□ 0.22
SENP3-209ENST00000610454 CA12O43570 354 aa16.43■□□□□ 0.22
SENP3-209ENST00000610454 IREB2P48200 963 aaKnown RBP16.43■□□□□ 0.22
SENP3-209ENST00000610454 CACNB3P54284 484 aa16.43■□□□□ 0.22
SENP3-209ENST00000610454 NBPF12Q5TAG4 269 aaPredicted RBP16.43■□□□□ 0.22
SENP3-209ENST00000610454 C20orf194Q5TEA3 1177 aa16.43■□□□□ 0.22
SENP3-209ENST00000610454 APOBEC3HQ6NTF7 200 aaKnown RBP16.43■□□□□ 0.22
SENP3-209ENST00000610454 RASAL3Q86YV0 1011 aa16.43■□□□□ 0.22
SENP3-209ENST00000610454 HOOK2Q96ED9 719 aa16.43■□□□□ 0.22
SENP3-209ENST00000610454 DBNDD2Q9BQY9 259 aa16.43■□□□□ 0.22
SENP3-209ENST00000610454 HMG20BQ9P0W2 317 aa16.43■□□□□ 0.22
SENP3-209ENST00000610454 DAGLAQ9Y4D2 1042 aa16.43■□□□□ 0.22
SENP3-209ENST00000610454 FAM155AB1AL88 458 aaPredicted RBP16.42■□□□□ 0.22
SENP3-209ENST00000610454 REM2Q8IYK8 340 aaPredicted RBP16.42■□□□□ 0.22
SENP3-209ENST00000610454 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.42■□□□□ 0.22
SENP3-209ENST00000610454 AK9Q5TCS8 1911 aa16.41■□□□□ 0.22
SENP3-209ENST00000610454 APBB1O00213 710 aa16.41■□□□□ 0.22
SENP3-209ENST00000610454 MCAMP43121 646 aa16.41■□□□□ 0.22
SENP3-209ENST00000610454 GSTO1P78417 241 aa16.41■□□□□ 0.22
SENP3-209ENST00000610454 KIF23Q02241 960 aaPredicted RBP16.41■□□□□ 0.22
SENP3-209ENST00000610454 FKBP1CQ5VVH2 108 aa16.41■□□□□ 0.22
SENP3-209ENST00000610454 FAM83AQ86UY5 434 aa16.41■□□□□ 0.22
SENP3-209ENST00000610454 AACSQ86V21 672 aa16.41■□□□□ 0.22
SENP3-209ENST00000610454 TMEM39BQ9GZU3 492 aa16.41■□□□□ 0.22
SENP3-209ENST00000610454 CCDC8Q9H0W5 538 aaPredicted RBP16.41■□□□□ 0.22
SENP3-209ENST00000610454 RAI14Q9P0K7 980 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms