RNA–Protein interactions for RNA: ENST00000607814.5

CTSA-218, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-218ENST00000607814 FZD1Q9UP38 647 aa17.11■□□□□ 0.33
CTSA-218ENST00000607814 KCNJ4P48050 445 aa17.1■□□□□ 0.33
CTSA-218ENST00000607814 C15orf52Q6ZUT6 534 aaKnown RBP17.1■□□□□ 0.33
CTSA-218ENST00000607814 KLHDC4Q8TBB5 520 aa17.1■□□□□ 0.33
CTSA-218ENST00000607814 UTYO14607 1347 aa17.1■□□□□ 0.33
CTSA-218ENST00000607814 RANBP2P49792 3224 aaKnown RBP17.1■□□□□ 0.33
CTSA-218ENST00000607814 SPDYE2BA6NHP3 402 aa17.09■□□□□ 0.33
CTSA-218ENST00000607814 SPDYE6P0CI01 402 aa17.09■□□□□ 0.33
CTSA-218ENST00000607814 LDHAL6AQ6ZMR3 332 aa17.09■□□□□ 0.33
CTSA-218ENST00000607814 PTPN18Q99952 460 aa17.09■□□□□ 0.33
CTSA-218ENST00000607814 USP2O75604 605 aaPredicted RBP17.08■□□□□ 0.32
CTSA-218ENST00000607814 CERS5Q8N5B7 392 aa17.08■□□□□ 0.32
CTSA-218ENST00000607814 CLUAP1Q96AJ1 413 aa17.08■□□□□ 0.32
CTSA-218ENST00000607814 API5Q9BZZ5 524 aaKnown RBP17.08■□□□□ 0.32
CTSA-218ENST00000607814 CNNM1Q9NRU3 951 aa17.08■□□□□ 0.32
CTSA-218ENST00000607814 IRS2Q9Y4H2 1338 aa17.07■□□□□ 0.32
CTSA-218ENST00000607814 IL1R1P14778 569 aa17.07■□□□□ 0.32
CTSA-218ENST00000607814 GJA5P36382 358 aa17.07■□□□□ 0.32
CTSA-218ENST00000607814 TNFAIP1Q13829 316 aa17.07■□□□□ 0.32
CTSA-218ENST00000607814 CFAP100Q494V2 611 aa17.07■□□□□ 0.32
CTSA-218ENST00000607814 SLC9C1Q4G0N8 1177 aa17.07■□□□□ 0.32
CTSA-218ENST00000607814 NBPF12Q5TAG4 269 aaPredicted RBP17.07■□□□□ 0.32
CTSA-218ENST00000607814 COLQQ9Y215 455 aaPredicted RBP17.07■□□□□ 0.32
CTSA-218ENST00000607814 LRRC24Q50LG9 513 aa17.06■□□□□ 0.32
CTSA-218ENST00000607814 ZNF804AQ7Z570 1209 aa17.06■□□□□ 0.32
CTSA-218ENST00000607814 PRMT6Q96LA8 375 aaPredicted RBP17.06■□□□□ 0.32
CTSA-218ENST00000607814 VEZTQ9HBM0 779 aa17.06■□□□□ 0.32
CTSA-218ENST00000607814 CLRN2A0PK11 232 aa17.05■□□□□ 0.32
CTSA-218ENST00000607814 RASA3Q14644 834 aa17.05■□□□□ 0.32
CTSA-218ENST00000607814 RABL6Q3YEC7 729 aaPredicted RBP17.05■□□□□ 0.32
CTSA-218ENST00000607814 OPTNQ96CV9 577 aa17.05■□□□□ 0.32
CTSA-218ENST00000607814 MS4A4AQ96JQ5 239 aa17.05■□□□□ 0.32
CTSA-218ENST00000607814 MEIS3Q99687 375 aa17.05■□□□□ 0.32
CTSA-218ENST00000607814 ZFYVE28Q9HCC9 887 aa17.05■□□□□ 0.32
CTSA-218ENST00000607814 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.05■□□□□ 0.32
CTSA-218ENST00000607814 JAG2Q9Y219 1238 aa17.05■□□□□ 0.32
CTSA-218ENST00000607814 ZBED9Q6R2W3 1325 aa17.04■□□□□ 0.32
CTSA-218ENST00000607814 WDHD1O75717 1129 aaPredicted RBP17.04■□□□□ 0.32
CTSA-218ENST00000607814 TRIM27P14373 513 aa17.04■□□□□ 0.32
CTSA-218ENST00000607814 GTF2A2P52657 109 aa17.04■□□□□ 0.32
CTSA-218ENST00000607814 GNRH1P01148 92 aa17.03■□□□□ 0.32
CTSA-218ENST00000607814 UBTFL1P0CB47 393 aaPredicted RBP17.03■□□□□ 0.32
CTSA-218ENST00000607814 CAP1Q01518 475 aa17.03■□□□□ 0.32
CTSA-218ENST00000607814 SLC4A8Q2Y0W8 1093 aa17.03■□□□□ 0.32
CTSA-218ENST00000607814 PCDHAC2Q9Y5I4 1007 aa17.03■□□□□ 0.32
CTSA-218ENST00000607814 LRRFIP2Q9Y608 721 aaKnown RBP17.03■□□□□ 0.32
CTSA-218ENST00000607814 PTCH2Q9Y6C5 1203 aa17.03■□□□□ 0.32
CTSA-218ENST00000607814 KIF16BQ96L93 1317 aa17.02■□□□□ 0.32
CTSA-218ENST00000607814 F8W031 263 aaPredicted RBP17.02■□□□□ 0.32
CTSA-218ENST00000607814 TAF1CQ15572 869 aaPredicted RBP17.02■□□□□ 0.32
CTSA-218ENST00000607814 BRI3BPQ8WY22 251 aa17.02■□□□□ 0.32
CTSA-218ENST00000607814 ELP3Q9H9T3 547 aa17.02■□□□□ 0.32
CTSA-218ENST00000607814 ZCCHC17Q9NP64 241 aaKnown RBP17.02■□□□□ 0.32
CTSA-218ENST00000607814 SERPINA10Q9UK55 444 aa17.02■□□□□ 0.32
CTSA-218ENST00000607814 RIPOR2Q9Y4F9 1068 aa17.02■□□□□ 0.32
CTSA-218ENST00000607814 OTOFQ9HC10 1997 aa17.02■□□□□ 0.31
CTSA-218ENST00000607814 A0A0C4DFX4 3053 aa17.02■□□□□ 0.31
CTSA-218ENST00000607814 CCL15-CCL14A0A0B4J2E2 113 aa17.01■□□□□ 0.31
CTSA-218ENST00000607814 RFX5P48382 616 aaPredicted RBP17.01■□□□□ 0.31
CTSA-218ENST00000607814 RBM5P52756 815 aaKnown RBP eCLIP17.01■□□□□ 0.31
CTSA-218ENST00000607814 PRMT2P55345 433 aa17.01■□□□□ 0.31
CTSA-218ENST00000607814 CCL15Q16663 113 aa17.01■□□□□ 0.31
CTSA-218ENST00000607814 SPDYE2Q495Y8 402 aa17.01■□□□□ 0.31
CTSA-218ENST00000607814 ATF7IPQ6VMQ6 1270 aa17.01■□□□□ 0.31
CTSA-218ENST00000607814 ARHGAP45Q92619 1136 aa17.01■□□□□ 0.31
CTSA-218ENST00000607814 OTUD5Q96G74 571 aa17.01■□□□□ 0.31
CTSA-218ENST00000607814 FAM205AQ6ZU69 1335 aa17■□□□□ 0.31
CTSA-218ENST00000607814 H0YGN5 161 aa17■□□□□ 0.31
CTSA-218ENST00000607814 IPO8O15397 1037 aaKnown RBP17■□□□□ 0.31
CTSA-218ENST00000607814 GYG1P46976 350 aa17■□□□□ 0.31
CTSA-218ENST00000607814 MAP3K9P80192 1104 aa17■□□□□ 0.31
CTSA-218ENST00000607814 KIF22Q14807 665 aa17■□□□□ 0.31
CTSA-218ENST00000607814 METTL24Q5JXM2 366 aa17■□□□□ 0.31
CTSA-218ENST00000607814 PPP1R3FQ6ZSY5 799 aaPredicted RBP17■□□□□ 0.31
CTSA-218ENST00000607814 TMEM57Q8N5G2 664 aa17■□□□□ 0.31
CTSA-218ENST00000607814 SIL1Q9H173 461 aa17■□□□□ 0.31
CTSA-218ENST00000607814 TLR2O60603 784 aa16.99■□□□□ 0.31
CTSA-218ENST00000607814 TNNI2P48788 182 aa16.99■□□□□ 0.31
CTSA-218ENST00000607814 ZKSCAN2Q63HK3 967 aa16.99■□□□□ 0.31
CTSA-218ENST00000607814 TEPSINQ96N21 525 aa16.99■□□□□ 0.31
CTSA-218ENST00000607814 ZNF70Q9UC06 446 aaPredicted RBP16.99■□□□□ 0.31
CTSA-218ENST00000607814 PA2G4Q9UQ80 394 aaKnown RBP16.99■□□□□ 0.31
CTSA-218ENST00000607814 CSADQ9Y600 493 aa16.99■□□□□ 0.31
CTSA-218ENST00000607814 AOX1Q06278 1338 aa16.98■□□□□ 0.31
CTSA-218ENST00000607814 VGLL4Q14135 290 aa16.98■□□□□ 0.31
CTSA-218ENST00000607814 FAM43AQ8N2R8 423 aa16.98■□□□□ 0.31
CTSA-218ENST00000607814 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.98■□□□□ 0.31
CTSA-218ENST00000607814 IQSEC3Q9UPP2 1182 aaPredicted RBP16.98■□□□□ 0.31
CTSA-218ENST00000607814 CUL9Q8IWT3 2517 aa16.98■□□□□ 0.31
CTSA-218ENST00000607814 A0A1B0GUL6 1792 aa16.97■□□□□ 0.31
CTSA-218ENST00000607814 CETPP11597 493 aa16.97■□□□□ 0.31
CTSA-218ENST00000607814 RLBP1P12271 317 aa16.97■□□□□ 0.31
CTSA-218ENST00000607814 LACTBP83111 547 aaPredicted RBP16.97■□□□□ 0.31
CTSA-218ENST00000607814 MFSD14BQ5SR56 506 aa16.97■□□□□ 0.31
CTSA-218ENST00000607814 SPDYE5A6NIY4 337 aa16.96■□□□□ 0.31
CTSA-218ENST00000607814 DZIP1LQ8IYY4 767 aaKnown RBP16.96■□□□□ 0.31
CTSA-218ENST00000607814 NKX2-3Q8TAU0 364 aa16.96■□□□□ 0.31
CTSA-218ENST00000607814 FAM84BQ96KN1 310 aaPredicted RBP16.96■□□□□ 0.31
CTSA-218ENST00000607814 TDRD3Q9H7E2 651 aaKnown RBP16.96■□□□□ 0.31
CTSA-218ENST00000607814 TTF2Q9UNY4 1162 aaKnown RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms