RNA–Protein interactions for RNA: ENST00000607045.5

TMEM248-207, Transcript of transmembrane protein 248, humanhuman

TSL 3

Gene TMEM248, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-207ENST00000607045 FRAT2O75474 233 aaPredicted RBP27.41■■□□□ 1.98
TMEM248-207ENST00000607045 IREB2P48200 963 aaKnown RBP27.41■■□□□ 1.98
TMEM248-207ENST00000607045 RFX5P48382 616 aaPredicted RBP27.41■■□□□ 1.98
TMEM248-207ENST00000607045 INHBEP58166 350 aa27.41■■□□□ 1.98
TMEM248-207ENST00000607045 ALDH1L2Q3SY69 923 aa27.41■■□□□ 1.98
TMEM248-207ENST00000607045 TRMT2AQ8IZ69 625 aaKnown RBP27.41■■□□□ 1.98
TMEM248-207ENST00000607045 UNCXA6NJT0 531 aa27.4■■□□□ 1.98
TMEM248-207ENST00000607045 IGF2BP3O00425 579 aaKnown RBP eCLIP27.4■■□□□ 1.98
TMEM248-207ENST00000607045 FKTNO75072 461 aa27.4■■□□□ 1.98
TMEM248-207ENST00000607045 ZBTB48P10074 688 aaPredicted RBP27.4■■□□□ 1.98
TMEM248-207ENST00000607045 PKN2Q16513 984 aaKnown RBP27.4■■□□□ 1.98
TMEM248-207ENST00000607045 TMEM39BQ9GZU3 492 aa27.4■■□□□ 1.98
TMEM248-207ENST00000607045 FGFR2P21802 821 aa27.39■■□□□ 1.98
TMEM248-207ENST00000607045 TNFAIP1Q13829 316 aa27.39■■□□□ 1.98
TMEM248-207ENST00000607045 ANKRD13AQ8IZ07 590 aa27.39■■□□□ 1.98
TMEM248-207ENST00000607045 SMC4Q9NTJ3 1288 aa27.39■■□□□ 1.98
TMEM248-207ENST00000607045 ALDH1A1P00352 501 aa27.38■■□□□ 1.97
TMEM248-207ENST00000607045 EYA2O00167 538 aa27.37■■□□□ 1.97
TMEM248-207ENST00000607045 CACNB3P54284 484 aa27.37■■□□□ 1.97
TMEM248-207ENST00000607045 TBC1D22AQ8WUA7 517 aa27.37■■□□□ 1.97
TMEM248-207ENST00000607045 PTPN18Q99952 460 aa27.37■■□□□ 1.97
TMEM248-207ENST00000607045 ELP3Q9H9T3 547 aa27.37■■□□□ 1.97
TMEM248-207ENST00000607045 NOB1Q9ULX3 412 aaKnown RBP27.37■■□□□ 1.97
TMEM248-207ENST00000607045 HDLBPQ00341 1268 aaKnown RBP27.36■■□□□ 1.97
TMEM248-207ENST00000607045 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.36■■□□□ 1.97
TMEM248-207ENST00000607045 ATG9AQ7Z3C6 839 aa27.36■■□□□ 1.97
TMEM248-207ENST00000607045 IFIT1P09914 478 aaKnown RBP27.35■■□□□ 1.97
TMEM248-207ENST00000607045 PUM3Q15397 648 aaKnown RBP27.35■■□□□ 1.97
TMEM248-207ENST00000607045 CNKSR2Q8WXI2 1034 aa27.35■■□□□ 1.97
TMEM248-207ENST00000607045 APOBEC3HQ6NTF7 200 aaKnown RBP27.34■■□□□ 1.97
TMEM248-207ENST00000607045 FBXO46Q6PJ61 603 aaPredicted RBP27.34■■□□□ 1.97
TMEM248-207ENST00000607045 TEKT1Q969V4 418 aa27.34■■□□□ 1.97
TMEM248-207ENST00000607045 MRIQ9BWK5 157 aa27.34■■□□□ 1.97
TMEM248-207ENST00000607045 ECM29Q5VYK3 1845 aa27.34■■□□□ 1.97
TMEM248-207ENST00000607045 HTTP42858 3142 aa27.34■■□□□ 1.97
TMEM248-207ENST00000607045 TNNI2P48788 182 aa27.33■■□□□ 1.97
TMEM248-207ENST00000607045 MAP3K9P80192 1104 aa27.33■■□□□ 1.97
TMEM248-207ENST00000607045 OPTNQ96CV9 577 aa27.33■■□□□ 1.97
TMEM248-207ENST00000607045 MS4A4AQ96JQ5 239 aa27.32■■□□□ 1.96
TMEM248-207ENST00000607045 SIL1Q9H173 461 aa27.32■■□□□ 1.96
TMEM248-207ENST00000607045 TESPA1A2RU30 521 aaPredicted RBP27.31■■□□□ 1.96
TMEM248-207ENST00000607045 LPIN2Q92539 896 aa27.31■■□□□ 1.96
TMEM248-207ENST00000607045 ZDHHC15Q96MV8 337 aa27.31■■□□□ 1.96
TMEM248-207ENST00000607045 CENPFP49454 3210 aa27.3■■□□□ 1.96
TMEM248-207ENST00000607045 UBTFL1P0CB47 393 aaPredicted RBP27.3■■□□□ 1.96
TMEM248-207ENST00000607045 CRHR2Q13324 411 aa27.3■■□□□ 1.96
TMEM248-207ENST00000607045 SLC5A1P13866 664 aa27.29■■□□□ 1.96
TMEM248-207ENST00000607045 VGLL4Q14135 290 aa27.29■■□□□ 1.96
TMEM248-207ENST00000607045 OTUD7BQ6GQQ9 843 aa27.29■■□□□ 1.96
TMEM248-207ENST00000607045 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.29■■□□□ 1.96
TMEM248-207ENST00000607045 TRIM17Q9Y577 477 aa27.29■■□□□ 1.96
TMEM248-207ENST00000607045 KIF16BQ96L93 1317 aa27.29■■□□□ 1.96
TMEM248-207ENST00000607045 PDE4DIPQ5VU43 2346 aa27.28■■□□□ 1.96
TMEM248-207ENST00000607045 HHIPL2Q6UWX4 724 aa27.28■■□□□ 1.96
TMEM248-207ENST00000607045 SUGT1Q9Y2Z0 365 aa27.28■■□□□ 1.96
TMEM248-207ENST00000607045 OTOP1Q7RTM1 612 aa27.27■■□□□ 1.96
TMEM248-207ENST00000607045 BRI3BPQ8WY22 251 aa27.27■■□□□ 1.96
TMEM248-207ENST00000607045 PA2G4Q9UQ80 394 aaKnown RBP27.27■■□□□ 1.96
TMEM248-207ENST00000607045 LRRFIP2Q9Y608 721 aaKnown RBP27.27■■□□□ 1.96
TMEM248-207ENST00000607045 CT47B1P0C2W7 299 aaPredicted RBP27.26■■□□□ 1.95
TMEM248-207ENST00000607045 CAP1Q01518 475 aa27.26■■□□□ 1.95
TMEM248-207ENST00000607045 WDR66Q8TBY9 1149 aa27.26■■□□□ 1.95
TMEM248-207ENST00000607045 CEP126Q9P2H0 1117 aa27.26■■□□□ 1.95
TMEM248-207ENST00000607045 FAM83AQ86UY5 434 aa27.25■■□□□ 1.95
TMEM248-207ENST00000607045 CD99L2Q8TCZ2 262 aa27.25■■□□□ 1.95
TMEM248-207ENST00000607045 ZKSCAN4Q969J2 545 aaPredicted RBP27.25■■□□□ 1.95
TMEM248-207ENST00000607045 API5Q9BZZ5 524 aaKnown RBP27.25■■□□□ 1.95
TMEM248-207ENST00000607045 CSADQ9Y600 493 aa27.25■■□□□ 1.95
TMEM248-207ENST00000607045 CIAO1O76071 339 aa27.24■■□□□ 1.95
TMEM248-207ENST00000607045 RARSP54136 660 aaKnown RBP27.24■■□□□ 1.95
TMEM248-207ENST00000607045 DIXDC1Q155Q3 683 aa27.24■■□□□ 1.95
TMEM248-207ENST00000607045 ATP2B3Q16720 1220 aa27.24■■□□□ 1.95
TMEM248-207ENST00000607045 FKBP1CQ5VVH2 108 aa27.24■■□□□ 1.95
TMEM248-207ENST00000607045 OTUD5Q96G74 571 aa27.24■■□□□ 1.95
TMEM248-207ENST00000607045 MEIS3Q99687 375 aa27.24■■□□□ 1.95
TMEM248-207ENST00000607045 TMOD2Q9NZR1 351 aa27.24■■□□□ 1.95
TMEM248-207ENST00000607045 CCL15-CCL14A0A0B4J2E2 113 aa27.23■■□□□ 1.95
TMEM248-207ENST00000607045 CCL15Q16663 113 aa27.23■■□□□ 1.95
TMEM248-207ENST00000607045 MIGA2Q7L4E1 593 aa27.23■■□□□ 1.95
TMEM248-207ENST00000607045 FBXO3Q9UK99 471 aa27.23■■□□□ 1.95
TMEM248-207ENST00000607045 MAST3O60307 1309 aa27.22■■□□□ 1.95
TMEM248-207ENST00000607045 GTF2A2P52657 109 aa27.22■■□□□ 1.95
TMEM248-207ENST00000607045 SP3Q02447 781 aa27.22■■□□□ 1.95
TMEM248-207ENST00000607045 FAM43AQ8N2R8 423 aa27.22■■□□□ 1.95
TMEM248-207ENST00000607045 SNCAIPQ9Y6H5 919 aa27.22■■□□□ 1.95
TMEM248-207ENST00000607045 MKI67P46013 3256 aaKnown RBP27.21■■□□□ 1.95
TMEM248-207ENST00000607045 PRDX5P30044 214 aa27.21■■□□□ 1.95
TMEM248-207ENST00000607045 PHKA1P46020 1223 aa27.21■■□□□ 1.95
TMEM248-207ENST00000607045 CDC42EP5Q6NZY7 148 aa27.21■■□□□ 1.95
TMEM248-207ENST00000607045 ERO1AQ96HE7 468 aa27.21■■□□□ 1.95
TMEM248-207ENST00000607045 WRNIP1Q96S55 665 aa27.21■■□□□ 1.95
TMEM248-207ENST00000607045 DAGLAQ9Y4D2 1042 aa27.21■■□□□ 1.95
TMEM248-207ENST00000607045 SPDYE5A6NIY4 337 aa27.2■■□□□ 1.94
TMEM248-207ENST00000607045 CCER2I3L3R5 266 aa27.2■■□□□ 1.94
TMEM248-207ENST00000607045 ADORA1P30542 326 aa27.2■■□□□ 1.94
TMEM248-207ENST00000607045 IL15P40933 162 aaPredicted RBP27.2■■□□□ 1.94
TMEM248-207ENST00000607045 TCP10Q12799 353 aa27.2■■□□□ 1.94
TMEM248-207ENST00000607045 ARAP2Q8WZ64 1704 aa27.2■■□□□ 1.94
TMEM248-207ENST00000607045 COPRSQ9NQ92 184 aa27.2■■□□□ 1.94
TMEM248-207ENST00000607045 PTPN22Q9Y2R2 807 aa27.2■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms