RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 CRKP46108 304 aa16.65■□□□□ 0.26
CTSA-213ENST00000606782 RBM5P52756 815 aaKnown RBP eCLIP16.65■□□□□ 0.26
CTSA-213ENST00000606782 TNFAIP1Q13829 316 aa16.65■□□□□ 0.26
CTSA-213ENST00000606782 RASA3Q14644 834 aa16.65■□□□□ 0.26
CTSA-213ENST00000606782 NBPF12Q5TAG4 269 aaPredicted RBP16.65■□□□□ 0.26
CTSA-213ENST00000606782 CFHR5Q9BXR6 569 aa16.65■□□□□ 0.26
CTSA-213ENST00000606782 VEZTQ9HBM0 779 aa16.65■□□□□ 0.26
CTSA-213ENST00000606782 RCAN3Q9UKA8 241 aa16.65■□□□□ 0.26
CTSA-213ENST00000606782 IQSEC3Q9UPP2 1182 aaPredicted RBP16.65■□□□□ 0.26
CTSA-213ENST00000606782 SLC5A1P13866 664 aa16.64■□□□□ 0.25
CTSA-213ENST00000606782 PRKG1Q13976 671 aa16.64■□□□□ 0.25
CTSA-213ENST00000606782 TEPSINQ96N21 525 aa16.64■□□□□ 0.25
CTSA-213ENST00000606782 TDRD3Q9H7E2 651 aaKnown RBP16.64■□□□□ 0.25
CTSA-213ENST00000606782 COPRSQ9NQ92 184 aa16.64■□□□□ 0.25
CTSA-213ENST00000606782 LRRFIP2Q9Y608 721 aaKnown RBP16.64■□□□□ 0.25
CTSA-213ENST00000606782 FRAT2O75474 233 aaPredicted RBP16.63■□□□□ 0.25
CTSA-213ENST00000606782 USP2O75604 605 aaPredicted RBP16.63■□□□□ 0.25
CTSA-213ENST00000606782 ZBTB48P10074 688 aaPredicted RBP16.63■□□□□ 0.25
CTSA-213ENST00000606782 INHBEP58166 350 aa16.63■□□□□ 0.25
CTSA-213ENST00000606782 SREBF2Q12772 1141 aa16.63■□□□□ 0.25
CTSA-213ENST00000606782 CHAF1AQ13111 956 aaPredicted RBP16.63■□□□□ 0.25
CTSA-213ENST00000606782 DGKZQ13574 1117 aa16.63■□□□□ 0.25
CTSA-213ENST00000606782 SLC10A4Q96EP9 437 aa16.63■□□□□ 0.25
CTSA-213ENST00000606782 ZDHHC15Q96MV8 337 aa16.63■□□□□ 0.25
CTSA-213ENST00000606782 MEIS3Q99687 375 aa16.63■□□□□ 0.25
CTSA-213ENST00000606782 IL15P40933 162 aaPredicted RBP16.62■□□□□ 0.25
CTSA-213ENST00000606782 RGS19P49795 217 aa16.62■□□□□ 0.25
CTSA-213ENST00000606782 MTX1Q13505 466 aa16.62■□□□□ 0.25
CTSA-213ENST00000606782 FKBP1CQ5VVH2 108 aa16.62■□□□□ 0.25
CTSA-213ENST00000606782 WDR66Q8TBY9 1149 aa16.62■□□□□ 0.25
CTSA-213ENST00000606782 TEKT1Q969V4 418 aa16.62■□□□□ 0.25
CTSA-213ENST00000606782 CEP126Q9P2H0 1117 aa16.62■□□□□ 0.25
CTSA-213ENST00000606782 FZD1Q9UP38 647 aa16.62■□□□□ 0.25
CTSA-213ENST00000606782 MANSC4A6NHS7 340 aaPredicted RBP16.61■□□□□ 0.25
CTSA-213ENST00000606782 IPO8O15397 1037 aaKnown RBP16.61■□□□□ 0.25
CTSA-213ENST00000606782 GNAI3P08754 354 aa16.61■□□□□ 0.25
CTSA-213ENST00000606782 IREB2P48200 963 aaKnown RBP16.61■□□□□ 0.25
CTSA-213ENST00000606782 APOBEC3HQ6NTF7 200 aaKnown RBP16.61■□□□□ 0.25
CTSA-213ENST00000606782 HHIPL2Q6UWX4 724 aa16.61■□□□□ 0.25
CTSA-213ENST00000606782 WNK4Q96J92 1243 aa16.61■□□□□ 0.25
CTSA-213ENST00000606782 CLMNQ96JQ2 1002 aa16.61■□□□□ 0.25
CTSA-213ENST00000606782 MAST3O60307 1309 aa16.61■□□□□ 0.25
CTSA-213ENST00000606782 LAMB1P07942 1786 aa16.61■□□□□ 0.25
CTSA-213ENST00000606782 TNNI2P48788 182 aa16.6■□□□□ 0.25
CTSA-213ENST00000606782 ATP2B3Q16720 1220 aa16.6■□□□□ 0.25
CTSA-213ENST00000606782 ANKRD13AQ8IZ07 590 aa16.6■□□□□ 0.25
CTSA-213ENST00000606782 CCDC85CA6NKD9 419 aa16.59■□□□□ 0.25
CTSA-213ENST00000606782 TBC1D8O95759 1140 aa16.59■□□□□ 0.25
CTSA-213ENST00000606782 ALDH1A1P00352 501 aa16.59■□□□□ 0.25
CTSA-213ENST00000606782 TRIM27P14373 513 aa16.59■□□□□ 0.25
CTSA-213ENST00000606782 MKRN3Q13064 507 aaKnown RBP16.59■□□□□ 0.25
CTSA-213ENST00000606782 ATF7IPQ6VMQ6 1270 aa16.59■□□□□ 0.25
CTSA-213ENST00000606782 CTU1Q7Z7A3 348 aaKnown RBP16.59■□□□□ 0.25
CTSA-213ENST00000606782 FAM83AQ86UY5 434 aa16.59■□□□□ 0.25
CTSA-213ENST00000606782 SIL1Q9H173 461 aa16.59■□□□□ 0.25
CTSA-213ENST00000606782 PA2G4Q9UQ80 394 aaKnown RBP16.59■□□□□ 0.25
CTSA-213ENST00000606782 TCP10L2B9ZVM9 353 aa16.58■□□□□ 0.24
CTSA-213ENST00000606782 GPR25O00155 361 aa16.58■□□□□ 0.24
CTSA-213ENST00000606782 SEMA3EO15041 775 aa16.58■□□□□ 0.24
CTSA-213ENST00000606782 CDAN1Q8IWY9 1227 aa16.58■□□□□ 0.24
CTSA-213ENST00000606782 ZNF296Q8WUU4 475 aaPredicted RBP16.58■□□□□ 0.24
CTSA-213ENST00000606782 TMEM39BQ9GZU3 492 aa16.58■□□□□ 0.24
CTSA-213ENST00000606782 GNL3LQ9NVN8 582 aaKnown RBP16.58■□□□□ 0.24
CTSA-213ENST00000606782 SALL1Q9NSC2 1324 aa16.58■□□□□ 0.24
CTSA-213ENST00000606782 TESPA1A2RU30 521 aaPredicted RBP16.57■□□□□ 0.24
CTSA-213ENST00000606782 GJA5P36382 358 aa16.57■□□□□ 0.24
CTSA-213ENST00000606782 ZKSCAN2Q63HK3 967 aa16.57■□□□□ 0.24
CTSA-213ENST00000606782 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.57■□□□□ 0.24
CTSA-213ENST00000606782 IFNL1Q8IU54 200 aa16.57■□□□□ 0.24
CTSA-213ENST00000606782 MAP3K9P80192 1104 aa16.56■□□□□ 0.24
CTSA-213ENST00000606782 PKN2Q16513 984 aaKnown RBP16.56■□□□□ 0.24
CTSA-213ENST00000606782 FRAT1Q92837 279 aaPredicted RBP16.56■□□□□ 0.24
CTSA-213ENST00000606782 R3HDMLQ9H3Y0 253 aa16.56■□□□□ 0.24
CTSA-213ENST00000606782 DENND2AQ9ULE3 1009 aa16.56■□□□□ 0.24
CTSA-213ENST00000606782 RPAP1Q9BWH6 1393 aaPredicted RBP16.55■□□□□ 0.24
CTSA-213ENST00000606782 MYH13Q9UKX3 1938 aa16.55■□□□□ 0.24
CTSA-213ENST00000606782 PDS5AQ29RF7 1337 aaKnown RBP16.55■□□□□ 0.24
CTSA-213ENST00000606782 IGF2BP3O00425 579 aaKnown RBP eCLIP16.55■□□□□ 0.24
CTSA-213ENST00000606782 SRGAP3O43295 1099 aa16.55■□□□□ 0.24
CTSA-213ENST00000606782 PHKA1P46020 1223 aa16.55■□□□□ 0.24
CTSA-213ENST00000606782 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.55■□□□□ 0.24
CTSA-213ENST00000606782 TMOD2Q9NZR1 351 aa16.55■□□□□ 0.24
CTSA-213ENST00000606782 TNNQ9UQP3 1299 aa16.55■□□□□ 0.24
CTSA-213ENST00000606782 FKTNO75072 461 aa16.54■□□□□ 0.24
CTSA-213ENST00000606782 GNAI2P04899 355 aa16.54■□□□□ 0.24
CTSA-213ENST00000606782 PRDX5P30044 214 aa16.54■□□□□ 0.24
CTSA-213ENST00000606782 CACNB3P54284 484 aa16.54■□□□□ 0.24
CTSA-213ENST00000606782 CCDC102BQ68D86 513 aa16.54■□□□□ 0.24
CTSA-213ENST00000606782 HOOK2Q96ED9 719 aa16.54■□□□□ 0.24
CTSA-213ENST00000606782 AKAP2Q9Y2D5 859 aa16.54■□□□□ 0.24
CTSA-213ENST00000606782 DAGLAQ9Y4D2 1042 aa16.54■□□□□ 0.24
CTSA-213ENST00000606782 OTOFQ9HC10 1997 aa16.54■□□□□ 0.24
CTSA-213ENST00000606782 LDHBP07195 334 aaKnown RBP16.53■□□□□ 0.24
CTSA-213ENST00000606782 ADORA1P30542 326 aa16.53■□□□□ 0.24
CTSA-213ENST00000606782 TIMM10P62072 90 aa16.53■□□□□ 0.24
CTSA-213ENST00000606782 MS4A4AQ96JQ5 239 aa16.53■□□□□ 0.24
CTSA-213ENST00000606782 PTPN18Q99952 460 aa16.53■□□□□ 0.24
CTSA-213ENST00000606782 ELP3Q9H9T3 547 aa16.53■□□□□ 0.24
CTSA-213ENST00000606782 TFCP2Q12800 502 aa16.52■□□□□ 0.24
CTSA-213ENST00000606782 VGLL4Q14135 290 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms