RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 CCDC102AQ96A19 550 aa14.3□□□□□ -0.12
CDCA3-212ENST00000604599 MRPL44Q9H9J2 332 aaKnown RBP14.3□□□□□ -0.12
CDCA3-212ENST00000604599 LZTFL1Q9NQ48 299 aa14.3□□□□□ -0.12
CDCA3-212ENST00000604599 GEMIN8Q9NWZ8 242 aaKnown RBP14.3□□□□□ -0.12
CDCA3-212ENST00000604599 DBF4Q9UBU7 674 aaPredicted RBP14.3□□□□□ -0.12
CDCA3-212ENST00000604599 AKAP2Q9Y2D5 859 aa14.3□□□□□ -0.12
CDCA3-212ENST00000604599 YEATS4O95619 227 aa14.3□□□□□ -0.12
CDCA3-212ENST00000604599 TFRCP02786 760 aaKnown RBP14.3□□□□□ -0.12
CDCA3-212ENST00000604599 HMGB1P09429 215 aaKnown RBP14.3□□□□□ -0.12
CDCA3-212ENST00000604599 MTF1Q14872 753 aa14.3□□□□□ -0.12
CDCA3-212ENST00000604599 MYSM1Q5VVJ2 828 aa14.3□□□□□ -0.12
CDCA3-212ENST00000604599 HDXQ7Z353 690 aa14.3□□□□□ -0.12
CDCA3-212ENST00000604599 RAB11FIP4Q86YS3 637 aa14.3□□□□□ -0.12
CDCA3-212ENST00000604599 C8orf76Q96K31 380 aa14.3□□□□□ -0.12
CDCA3-212ENST00000604599 GPHNQ9NQX3 736 aaPredicted RBP14.3□□□□□ -0.12
CDCA3-212ENST00000604599 POLR3EQ9NVU0 708 aa14.3□□□□□ -0.12
CDCA3-212ENST00000604599 WDHD1O75717 1129 aaPredicted RBP14.29□□□□□ -0.12
CDCA3-212ENST00000604599 AIMP1Q12904 312 aaKnown RBP14.29□□□□□ -0.12
CDCA3-212ENST00000604599 AXDND1Q5T1B0 1012 aaPredicted RBP14.29□□□□□ -0.12
CDCA3-212ENST00000604599 KSR2Q6VAB6 950 aa14.29□□□□□ -0.12
CDCA3-212ENST00000604599 SYNE3Q6ZMZ3 975 aa14.29□□□□□ -0.12
CDCA3-212ENST00000604599 SLC26A8Q96RN1 970 aa14.29□□□□□ -0.12
CDCA3-212ENST00000604599 ABCB6Q9NP58 842 aa14.29□□□□□ -0.12
CDCA3-212ENST00000604599 NCAPD2Q15021 1401 aa14.29□□□□□ -0.12
CDCA3-212ENST00000604599 CUTAO60888 179 aa14.29□□□□□ -0.12
CDCA3-212ENST00000604599 HOXC9P31274 260 aa14.29□□□□□ -0.12
CDCA3-212ENST00000604599 SYKP43405 635 aa14.29□□□□□ -0.12
CDCA3-212ENST00000604599 SART3Q15020 963 aaKnown RBP14.29□□□□□ -0.12
CDCA3-212ENST00000604599 SKIDA1Q1XH10 827 aa14.29□□□□□ -0.12
CDCA3-212ENST00000604599 SRGAP1Q7Z6B7 1085 aa14.29□□□□□ -0.12
CDCA3-212ENST00000604599 TC2NQ8N9U0 490 aa14.29□□□□□ -0.12
CDCA3-212ENST00000604599 KIF28PB7ZC32 967 aa14.28□□□□□ -0.12
CDCA3-212ENST00000604599 EIF3JO75822 258 aaKnown RBP14.28□□□□□ -0.12
CDCA3-212ENST00000604599 RHOXF2BP0C7M4 288 aa14.28□□□□□ -0.12
CDCA3-212ENST00000604599 GUCY2CP25092 1073 aa14.28□□□□□ -0.12
CDCA3-212ENST00000604599 EXOSC10Q01780 885 aaKnown RBP14.28□□□□□ -0.12
CDCA3-212ENST00000604599 RHOXF2Q9BQY4 288 aa14.28□□□□□ -0.12
CDCA3-212ENST00000604599 HDAC5Q9UQL6 1122 aa14.28□□□□□ -0.12
CDCA3-212ENST00000604599 A0A0U1RQJ8 604 aa14.28□□□□□ -0.12
CDCA3-212ENST00000604599 PRAMEF22A3QJZ6 481 aa14.28□□□□□ -0.12
CDCA3-212ENST00000604599 STX10O60499 249 aa14.28□□□□□ -0.12
CDCA3-212ENST00000604599 ATRIPQ8WXE1 791 aa14.28□□□□□ -0.12
CDCA3-212ENST00000604599 SIRT1Q96EB6 747 aa14.28□□□□□ -0.12
CDCA3-212ENST00000604599 BTBD11A6QL63 1104 aa14.28□□□□□ -0.12
CDCA3-212ENST00000604599 HOXB7P09629 217 aa14.28□□□□□ -0.12
CDCA3-212ENST00000604599 CMA1P23946 247 aa14.28□□□□□ -0.12
CDCA3-212ENST00000604599 NLRP6P59044 892 aa14.28□□□□□ -0.12
CDCA3-212ENST00000604599 ANO1Q5XXA6 986 aa14.28□□□□□ -0.12
CDCA3-212ENST00000604599 OLFM4Q6UX06 510 aa14.28□□□□□ -0.12
CDCA3-212ENST00000604599 TECPR2O15040 1411 aa14.27□□□□□ -0.12
CDCA3-212ENST00000604599 E7EWF7 191 aa14.27□□□□□ -0.12
CDCA3-212ENST00000604599 ATP5JP18859 108 aa14.27□□□□□ -0.12
CDCA3-212ENST00000604599 HSP90B2PQ58FF3 399 aa14.27□□□□□ -0.12
CDCA3-212ENST00000604599 LRRC31Q6UY01 552 aa14.27□□□□□ -0.12
CDCA3-212ENST00000604599 CNNM3Q8NE01 707 aa14.27□□□□□ -0.12
CDCA3-212ENST00000604599 NGDNQ8NEJ9 315 aaKnown RBP14.27□□□□□ -0.12
CDCA3-212ENST00000604599 TUBE1Q9UJT0 475 aa14.27□□□□□ -0.12
CDCA3-212ENST00000604599 L1RE1Q9UN81 338 aa14.27□□□□□ -0.12
CDCA3-212ENST00000604599 RICTORQ6R327 1708 aa14.27□□□□□ -0.13
CDCA3-212ENST00000604599 CDC27P30260 824 aa14.27□□□□□ -0.13
CDCA3-212ENST00000604599 PDE4BQ07343 736 aa14.27□□□□□ -0.13
CDCA3-212ENST00000604599 E2F4Q16254 413 aa14.27□□□□□ -0.13
CDCA3-212ENST00000604599 HNRNPLLQ8WVV9 542 aaKnown RBP14.27□□□□□ -0.13
CDCA3-212ENST00000604599 AGXT2Q9BYV1 514 aa14.27□□□□□ -0.13
CDCA3-212ENST00000604599 NWD1Q149M9 1564 aa14.27□□□□□ -0.13
CDCA3-212ENST00000604599 NEO1Q92859 1461 aa14.27□□□□□ -0.13
CDCA3-212ENST00000604599 TOPAZ1Q8N9V7 1692 aa14.26□□□□□ -0.13
CDCA3-212ENST00000604599 CEMIPQ8WUJ3 1361 aa14.26□□□□□ -0.13
CDCA3-212ENST00000604599 SOWAHDA6NJG2 315 aa14.26□□□□□ -0.13
CDCA3-212ENST00000604599 ERLIN1O75477 346 aa14.26□□□□□ -0.13
CDCA3-212ENST00000604599 VSNL1P62760 191 aa14.26□□□□□ -0.13
CDCA3-212ENST00000604599 TBX2Q13207 712 aaPredicted RBP14.26□□□□□ -0.13
CDCA3-212ENST00000604599 GPATCH11Q8N954 259 aa14.26□□□□□ -0.13
CDCA3-212ENST00000604599 LINS1Q8NG48 757 aa14.26□□□□□ -0.13
CDCA3-212ENST00000604599 PPM1EQ8WY54 764 aa14.26□□□□□ -0.13
CDCA3-212ENST00000604599 DBNDD2Q9BQY9 259 aa14.26□□□□□ -0.13
CDCA3-212ENST00000604599 BRMS1Q9HCU9 246 aa14.26□□□□□ -0.13
CDCA3-212ENST00000604599 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.26□□□□□ -0.13
CDCA3-212ENST00000604599 RPS6KA5O75582 802 aa14.26□□□□□ -0.13
CDCA3-212ENST00000604599 CORO7P57737 925 aa14.26□□□□□ -0.13
CDCA3-212ENST00000604599 TFCP2Q12800 502 aa14.26□□□□□ -0.13
CDCA3-212ENST00000604599 CASP8Q14790 479 aa14.26□□□□□ -0.13
CDCA3-212ENST00000604599 SPECC1LQ69YQ0 1117 aa14.26□□□□□ -0.13
CDCA3-212ENST00000604599 TEX2Q8IWB9 1127 aa14.26□□□□□ -0.13
CDCA3-212ENST00000604599 ZNF274Q96GC6 653 aaPredicted RBP14.26□□□□□ -0.13
CDCA3-212ENST00000604599 TNNI3KQ59H18 835 aa14.25□□□□□ -0.13
CDCA3-212ENST00000604599 EPHA10Q5JZY3 1008 aa14.25□□□□□ -0.13
CDCA3-212ENST00000604599 FAM204AQ9H8W3 233 aa14.25□□□□□ -0.13
CDCA3-212ENST00000604599 FPGT-TNNI3KV9GXZ4 949 aa14.25□□□□□ -0.13
CDCA3-212ENST00000604599 CCDC175P0C221 793 aa14.25□□□□□ -0.13
CDCA3-212ENST00000604599 ATP2B1P20020 1258 aa14.25□□□□□ -0.13
CDCA3-212ENST00000604599 USP5P45974 858 aa14.25□□□□□ -0.13
CDCA3-212ENST00000604599 NCAPGQ9BPX3 1015 aa14.25□□□□□ -0.13
CDCA3-212ENST00000604599 C19orf44Q9H6X5 657 aa14.25□□□□□ -0.13
CDCA3-212ENST00000604599 RAB21Q9UL25 225 aa14.25□□□□□ -0.13
CDCA3-212ENST00000604599 MPRIPQ6WCQ1 1025 aa14.25□□□□□ -0.13
CDCA3-212ENST00000604599 TRMT44Q8IYL2 757 aaKnown RBP14.25□□□□□ -0.13
CDCA3-212ENST00000604599 MYCBPQ99417 103 aaPredicted RBP14.25□□□□□ -0.13
CDCA3-212ENST00000604599 DEF6Q9H4E7 631 aa14.25□□□□□ -0.13
CDCA3-212ENST00000604599 MKRN1Q9UHC7 482 aaKnown RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms