RNA–Protein interactions for RNA: ENST00000604419.1

SRGAP2-210, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

TSL 3

Gene SRGAP2, Length 716 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-210ENST00000604419 TDRD3Q9H7E2 651 aaKnown RBP12.21□□□□□ -0.45
SRGAP2-210ENST00000604419 EFCC1Q9HA90 598 aa12.21□□□□□ -0.45
SRGAP2-210ENST00000604419 SPINK5Q9NQ38 1064 aaPredicted RBP12.21□□□□□ -0.45
SRGAP2-210ENST00000604419 PTPN22Q9Y2R2 807 aa12.21□□□□□ -0.45
SRGAP2-210ENST00000604419 FRAT2O75474 233 aaPredicted RBP12.2□□□□□ -0.46
SRGAP2-210ENST00000604419 WDHD1O75717 1129 aaPredicted RBP12.2□□□□□ -0.46
SRGAP2-210ENST00000604419 GJA5P36382 358 aa12.2□□□□□ -0.46
SRGAP2-210ENST00000604419 CRKP46108 304 aa12.2□□□□□ -0.46
SRGAP2-210ENST00000604419 GTF2A2P52657 109 aa12.2□□□□□ -0.46
SRGAP2-210ENST00000604419 MAP3K9P80192 1104 aa12.2□□□□□ -0.46
SRGAP2-210ENST00000604419 PPP4R3CPQ6ZMV5 832 aa12.2□□□□□ -0.46
SRGAP2-210ENST00000604419 OPTNQ96CV9 577 aa12.2□□□□□ -0.46
SRGAP2-210ENST00000604419 HOOK2Q96ED9 719 aa12.2□□□□□ -0.46
SRGAP2-210ENST00000604419 SUCLG2Q96I99 432 aa12.2□□□□□ -0.46
SRGAP2-210ENST00000604419 MS4A4AQ96JQ5 239 aa12.2□□□□□ -0.46
SRGAP2-210ENST00000604419 TEPSINQ96N21 525 aa12.2□□□□□ -0.46
SRGAP2-210ENST00000604419 PTPN18Q99952 460 aa12.2□□□□□ -0.46
SRGAP2-210ENST00000604419 PUS3Q9BZE2 481 aaKnown RBP12.2□□□□□ -0.46
SRGAP2-210ENST00000604419 ELP3Q9H9T3 547 aa12.2□□□□□ -0.46
SRGAP2-210ENST00000604419 ECM29Q5VYK3 1845 aa12.2□□□□□ -0.46
SRGAP2-210ENST00000604419 HTTP42858 3142 aa12.2□□□□□ -0.46
SRGAP2-210ENST00000604419 AOX1Q06278 1338 aa12.19□□□□□ -0.46
SRGAP2-210ENST00000604419 TCP10L2B9ZVM9 353 aa12.19□□□□□ -0.46
SRGAP2-210ENST00000604419 NBPF7P0C2Y1 421 aaPredicted RBP12.19□□□□□ -0.46
SRGAP2-210ENST00000604419 RABL6Q3YEC7 729 aaPredicted RBP12.19□□□□□ -0.46
SRGAP2-210ENST00000604419 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.19□□□□□ -0.46
SRGAP2-210ENST00000604419 KAZALD1Q96I82 304 aa12.19□□□□□ -0.46
SRGAP2-210ENST00000604419 ZFYVE28Q9HCC9 887 aa12.19□□□□□ -0.46
SRGAP2-210ENST00000604419 SUGT1Q9Y2Z0 365 aa12.19□□□□□ -0.46
SRGAP2-210ENST00000604419 CSADQ9Y600 493 aa12.19□□□□□ -0.46
SRGAP2-210ENST00000604419 PDE8BO95263 885 aa12.18□□□□□ -0.46
SRGAP2-210ENST00000604419 METTL24Q5JXM2 366 aa12.18□□□□□ -0.46
SRGAP2-210ENST00000604419 FKBP1CQ5VVH2 108 aa12.18□□□□□ -0.46
SRGAP2-210ENST00000604419 NBPF11Q86T75 865 aa12.18□□□□□ -0.46
SRGAP2-210ENST00000604419 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.18□□□□□ -0.46
SRGAP2-210ENST00000604419 CD99L2Q8TCZ2 262 aa12.18□□□□□ -0.46
SRGAP2-210ENST00000604419 TEKT1Q969V4 418 aa12.18□□□□□ -0.46
SRGAP2-210ENST00000604419 ARMC5Q96C12 935 aa12.18□□□□□ -0.46
SRGAP2-210ENST00000604419 TMEM39BQ9GZU3 492 aa12.18□□□□□ -0.46
SRGAP2-210ENST00000604419 TMOD2Q9NZR1 351 aa12.18□□□□□ -0.46
SRGAP2-210ENST00000604419 MAST3O60307 1309 aa12.17□□□□□ -0.46
SRGAP2-210ENST00000604419 CCL15-CCL14A0A0B4J2E2 113 aa12.17□□□□□ -0.46
SRGAP2-210ENST00000604419 VGLL4Q14135 290 aa12.17□□□□□ -0.46
SRGAP2-210ENST00000604419 TAF1CQ15572 869 aaPredicted RBP12.17□□□□□ -0.46
SRGAP2-210ENST00000604419 CCL15Q16663 113 aa12.17□□□□□ -0.46
SRGAP2-210ENST00000604419 FAM83AQ86UY5 434 aa12.17□□□□□ -0.46
SRGAP2-210ENST00000604419 BRI3BPQ8WY22 251 aa12.17□□□□□ -0.46
SRGAP2-210ENST00000604419 ZDHHC15Q96MV8 337 aa12.17□□□□□ -0.46
SRGAP2-210ENST00000604419 TMEM106CQ9BVX2 250 aa12.17□□□□□ -0.46
SRGAP2-210ENST00000604419 BICC1Q9H694 974 aaKnown RBP12.17□□□□□ -0.46
SRGAP2-210ENST00000604419 ZCCHC17Q9NP64 241 aaKnown RBP12.17□□□□□ -0.46
SRGAP2-210ENST00000604419 PTPRCP08575 1304 aa12.16□□□□□ -0.46
SRGAP2-210ENST00000604419 KIF16BQ96L93 1317 aa12.16□□□□□ -0.46
SRGAP2-210ENST00000604419 A0A1B0GUL6 1792 aa12.16□□□□□ -0.46
SRGAP2-210ENST00000604419 LAMB1P07942 1786 aa12.16□□□□□ -0.46
SRGAP2-210ENST00000604419 CENPFP49454 3210 aa12.16□□□□□ -0.46
SRGAP2-210ENST00000604419 IFIT1P09914 478 aaKnown RBP12.16□□□□□ -0.46
SRGAP2-210ENST00000604419 CETPP11597 493 aa12.16□□□□□ -0.46
SRGAP2-210ENST00000604419 CHAF1AQ13111 956 aaPredicted RBP12.16□□□□□ -0.46
SRGAP2-210ENST00000604419 LRRC24Q50LG9 513 aa12.16□□□□□ -0.46
SRGAP2-210ENST00000604419 HHIPL2Q6UWX4 724 aa12.16□□□□□ -0.46
SRGAP2-210ENST00000604419 ERO1BQ86YB8 467 aa12.16□□□□□ -0.46
SRGAP2-210ENST00000604419 FAM9BQ8IZU0 186 aa12.16□□□□□ -0.46
SRGAP2-210ENST00000604419 POTEFA5A3E0 1075 aa12.15□□□□□ -0.46
SRGAP2-210ENST00000604419 SPDYE5A6NIY4 337 aa12.15□□□□□ -0.46
SRGAP2-210ENST00000604419 GNRH1P01148 92 aa12.15□□□□□ -0.46
SRGAP2-210ENST00000604419 ZEB1P37275 1124 aaPredicted RBP12.15□□□□□ -0.46
SRGAP2-210ENST00000604419 KIF22Q14807 665 aa12.15□□□□□ -0.46
SRGAP2-210ENST00000604419 DCAF15Q66K64 600 aa12.15□□□□□ -0.46
SRGAP2-210ENST00000604419 MRPL50Q8N5N7 158 aaKnown RBP12.15□□□□□ -0.46
SRGAP2-210ENST00000604419 ANKRD44Q8N8A2 993 aa12.15□□□□□ -0.46
SRGAP2-210ENST00000604419 VGLL2Q8N8G2 317 aa12.15□□□□□ -0.46
SRGAP2-210ENST00000604419 OTUD5Q96G74 571 aa12.15□□□□□ -0.46
SRGAP2-210ENST00000604419 IQSEC3Q9UPP2 1182 aaPredicted RBP12.15□□□□□ -0.46
SRGAP2-210ENST00000604419 ZNF316A6NFI3 1004 aaPredicted RBP12.14□□□□□ -0.47
SRGAP2-210ENST00000604419 TLR2O60603 784 aa12.14□□□□□ -0.47
SRGAP2-210ENST00000604419 BCAMP50895 628 aa12.14□□□□□ -0.47
SRGAP2-210ENST00000604419 SNAPC2Q13487 334 aa12.14□□□□□ -0.47
SRGAP2-210ENST00000604419 PUM3Q15397 648 aaKnown RBP12.14□□□□□ -0.47
SRGAP2-210ENST00000604419 GRIK5Q16478 980 aa12.14□□□□□ -0.47
SRGAP2-210ENST00000604419 APOBEC3HQ6NTF7 200 aaKnown RBP12.14□□□□□ -0.47
SRGAP2-210ENST00000604419 CDAN1Q8IWY9 1227 aa12.14□□□□□ -0.47
SRGAP2-210ENST00000604419 WDR66Q8TBY9 1149 aa12.14□□□□□ -0.47
SRGAP2-210ENST00000604419 CNKSR2Q8WXI2 1034 aa12.14□□□□□ -0.47
SRGAP2-210ENST00000604419 USP44Q9H0E7 712 aa12.14□□□□□ -0.47
SRGAP2-210ENST00000604419 RNF216Q9NWF9 866 aaPredicted RBP12.14□□□□□ -0.47
SRGAP2-210ENST00000604419 MKI67P46013 3256 aaKnown RBP12.13□□□□□ -0.47
SRGAP2-210ENST00000604419 EN2P19622 333 aaPredicted RBP12.13□□□□□ -0.47
SRGAP2-210ENST00000604419 FGFR2P21802 821 aa12.13□□□□□ -0.47
SRGAP2-210ENST00000604419 PRMT2P55345 433 aa12.13□□□□□ -0.47
SRGAP2-210ENST00000604419 PPATQ06203 517 aa12.13□□□□□ -0.47
SRGAP2-210ENST00000604419 PPIL2Q13356 520 aa12.13□□□□□ -0.47
SRGAP2-210ENST00000604419 SLC9C1Q4G0N8 1177 aa12.13□□□□□ -0.47
SRGAP2-210ENST00000604419 FAM43AQ8N2R8 423 aa12.13□□□□□ -0.47
SRGAP2-210ENST00000604419 LPIN2Q92539 896 aa12.13□□□□□ -0.47
SRGAP2-210ENST00000604419 ZNF333Q96JL9 665 aa12.13□□□□□ -0.47
SRGAP2-210ENST00000604419 WRNIP1Q96S55 665 aa12.13□□□□□ -0.47
SRGAP2-210ENST00000604419 ZNF521Q96K83 1311 aa12.12□□□□□ -0.47
SRGAP2-210ENST00000604419 E9PSI1 815 aa12.12□□□□□ -0.47
SRGAP2-210ENST00000604419 EYA2O00167 538 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms