RNA–Protein interactions for RNA: ENST00000604030.6

SH3D19-211, Transcript of SH3 domain containing 19, humanhuman

TSL 5 BASIC

Gene SH3D19, Length 5,228 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-211ENST00000604030 IQCDQ96DY2 449 aa23.75■■□□□ 1.39
SH3D19-211ENST00000604030 TRPM2O94759 1503 aa23.75■■□□□ 1.39
SH3D19-211ENST00000604030 ATP2A2P16615 1042 aaKnown RBP23.75■■□□□ 1.39
SH3D19-211ENST00000604030 TNNQ9UQP3 1299 aa23.75■■□□□ 1.39
SH3D19-211ENST00000604030 SETDB1Q15047 1291 aa23.74■■□□□ 1.39
SH3D19-211ENST00000604030 ANO1Q5XXA6 986 aa23.74■■□□□ 1.39
SH3D19-211ENST00000604030 MSANTD4Q8NCY6 345 aa23.74■■□□□ 1.39
SH3D19-211ENST00000604030 CCDC114Q96M63 670 aa23.74■■□□□ 1.39
SH3D19-211ENST00000604030 DEXIO95424 95 aa23.74■■□□□ 1.39
SH3D19-211ENST00000604030 ST5P78524 1137 aa23.74■■□□□ 1.39
SH3D19-211ENST00000604030 ARHGAP6O43182 974 aa23.74■■□□□ 1.39
SH3D19-211ENST00000604030 CALCOCO2Q13137 446 aa23.74■■□□□ 1.39
SH3D19-211ENST00000604030 ATP2C2O75185 946 aa23.73■■□□□ 1.39
SH3D19-211ENST00000604030 POTEDQ86YR6 584 aa23.73■■□□□ 1.39
SH3D19-211ENST00000604030 AFAP1L1Q8TED9 768 aa23.73■■□□□ 1.39
SH3D19-211ENST00000604030 SSH2Q76I76 1423 aa23.73■■□□□ 1.39
SH3D19-211ENST00000604030 RIMS2Q9UQ26 1411 aa23.73■■□□□ 1.39
SH3D19-211ENST00000604030 A0A1B0GUL7 405 aa23.73■■□□□ 1.39
SH3D19-211ENST00000604030 TM6SF1Q9BZW5 370 aa23.73■■□□□ 1.39
SH3D19-211ENST00000604030 DDX21Q9NR30 783 aaKnown RBP eCLIP23.73■■□□□ 1.39
SH3D19-211ENST00000604030 ZNF518AQ6AHZ1 1483 aa23.73■■□□□ 1.39
SH3D19-211ENST00000604030 RHOXF2BP0C7M4 288 aa23.73■■□□□ 1.39
SH3D19-211ENST00000604030 NBPF6Q5VWK0 638 aa23.73■■□□□ 1.39
SH3D19-211ENST00000604030 ZNF804AQ7Z570 1209 aa23.73■■□□□ 1.39
SH3D19-211ENST00000604030 NBPF5PQ86XG9 351 aaPredicted RBP23.73■■□□□ 1.39
SH3D19-211ENST00000604030 NBPF4Q96M43 638 aa23.73■■□□□ 1.39
SH3D19-211ENST00000604030 NLRP3Q96P20 1036 aa23.73■■□□□ 1.39
SH3D19-211ENST00000604030 RHOXF2Q9BQY4 288 aa23.73■■□□□ 1.39
SH3D19-211ENST00000604030 SYNCQ9H7C4 482 aa23.73■■□□□ 1.39
SH3D19-211ENST00000604030 PPP1R1BQ9UD71 204 aaPredicted RBP23.73■■□□□ 1.39
SH3D19-211ENST00000604030 SGSM2O43147 1006 aa23.73■■□□□ 1.39
SH3D19-211ENST00000604030 CLUL1Q15846 466 aa23.72■■□□□ 1.39
SH3D19-211ENST00000604030 NYXQ9GZU5 481 aa23.72■■□□□ 1.39
SH3D19-211ENST00000604030 BLMP54132 1417 aaPredicted RBP23.72■■□□□ 1.39
SH3D19-211ENST00000604030 ALDH3A1P30838 453 aa23.72■■□□□ 1.39
SH3D19-211ENST00000604030 TMTC1Q8IUR5 882 aa23.72■■□□□ 1.39
SH3D19-211ENST00000604030 IGSF22Q8N9C0 903 aa23.72■■□□□ 1.39
SH3D19-211ENST00000604030 SMARCC2Q8TAQ2 1214 aa23.72■■□□□ 1.39
SH3D19-211ENST00000604030 KIAA1524Q8TCG1 905 aa23.72■■□□□ 1.39
SH3D19-211ENST00000604030 SELENOSQ9BQE4 189 aa23.72■■□□□ 1.39
SH3D19-211ENST00000604030 ATP10BO94823 1461 aa23.72■■□□□ 1.39
SH3D19-211ENST00000604030 TFCP2Q12800 502 aa23.72■■□□□ 1.39
SH3D19-211ENST00000604030 CCDC65Q8IXS2 484 aa23.72■■□□□ 1.39
SH3D19-211ENST00000604030 SWAP70Q9UH65 585 aa23.72■■□□□ 1.39
SH3D19-211ENST00000604030 MXRA7P84157 204 aa23.72■■□□□ 1.39
SH3D19-211ENST00000604030 CAPZA3Q96KX2 299 aa23.72■■□□□ 1.39
SH3D19-211ENST00000604030 HDAC9Q9UKV0 1011 aa23.72■■□□□ 1.39
SH3D19-211ENST00000604030 SLC27A2O14975 620 aa23.71■■□□□ 1.39
SH3D19-211ENST00000604030 FAM13AO94988 1023 aa23.71■■□□□ 1.39
SH3D19-211ENST00000604030 ZBTB16Q05516 673 aa23.71■■□□□ 1.39
SH3D19-211ENST00000604030 IFT74Q96LB3 600 aa23.71■■□□□ 1.39
SH3D19-211ENST00000604030 STK24Q9Y6E0 443 aa23.71■■□□□ 1.39
SH3D19-211ENST00000604030 SYCP2Q9BX26 1530 aa23.71■■□□□ 1.39
SH3D19-211ENST00000604030 STX17P56962 302 aa23.71■■□□□ 1.39
SH3D19-211ENST00000604030 SNX14Q9Y5W7 946 aa23.71■■□□□ 1.39
SH3D19-211ENST00000604030 MRVI1Q9Y6F6 885 aa23.71■■□□□ 1.39
SH3D19-211ENST00000604030 NUP153P49790 1475 aaKnown RBP23.71■■□□□ 1.39
SH3D19-211ENST00000604030 PHACTR2O75167 634 aa23.71■■□□□ 1.39
SH3D19-211ENST00000604030 GIGYF1O75420 1035 aaPredicted RBP23.71■■□□□ 1.39
SH3D19-211ENST00000604030 NLRP12P59046 1061 aa23.7■■□□□ 1.39
SH3D19-211ENST00000604030 CHMP4BP1P59074 171 aa23.7■■□□□ 1.39
SH3D19-211ENST00000604030 DCAF5Q96JK2 942 aa23.7■■□□□ 1.39
SH3D19-211ENST00000604030 STIM2Q9P246 746 aa23.7■■□□□ 1.39
SH3D19-211ENST00000604030 A0A1W2PP64 1363 aa23.7■■□□□ 1.38
SH3D19-211ENST00000604030 SPDYE3A6NKU9 549 aa23.7■■□□□ 1.38
SH3D19-211ENST00000604030 SV2BQ7L1I2 683 aa23.7■■□□□ 1.38
SH3D19-211ENST00000604030 CSRNP2Q9H175 543 aa23.7■■□□□ 1.38
SH3D19-211ENST00000604030 KCNH3Q9ULD8 1083 aa23.7■■□□□ 1.38
SH3D19-211ENST00000604030 FANCCQ00597 558 aa23.7■■□□□ 1.38
SH3D19-211ENST00000604030 RSRC1Q96IZ7 334 aaKnown RBP23.7■■□□□ 1.38
SH3D19-211ENST00000604030 A0A1B0GVL5 298 aa23.7■■□□□ 1.38
SH3D19-211ENST00000604030 LACTBP83111 547 aaPredicted RBP23.7■■□□□ 1.38
SH3D19-211ENST00000604030 CNNM4Q6P4Q7 775 aa23.7■■□□□ 1.38
SH3D19-211ENST00000604030 CCDC97Q96F63 343 aaPredicted RBP23.7■■□□□ 1.38
SH3D19-211ENST00000604030 CARD14Q9BXL6 1004 aa23.7■■□□□ 1.38
SH3D19-211ENST00000604030 ANKRD2Q9GZV1 360 aa23.7■■□□□ 1.38
SH3D19-211ENST00000604030 JARID2Q92833 1246 aaPredicted RBP23.69■■□□□ 1.38
SH3D19-211ENST00000604030 GLT8D2Q9H1C3 349 aa23.69■■□□□ 1.38
SH3D19-211ENST00000604030 TSKSQ9UJT2 592 aa23.69■■□□□ 1.38
SH3D19-211ENST00000604030 MAP3K9P80192 1104 aa23.69■■□□□ 1.38
SH3D19-211ENST00000604030 RIOK3O14730 519 aaKnown RBP23.69■■□□□ 1.38
SH3D19-211ENST00000604030 SEL1L2Q5TEA6 688 aa23.69■■□□□ 1.38
SH3D19-211ENST00000604030 GSTA5Q7RTV2 222 aa23.69■■□□□ 1.38
SH3D19-211ENST00000604030 RPGRIP1Q96KN7 1286 aa23.69■■□□□ 1.38
SH3D19-211ENST00000604030 CBX8Q9HC52 389 aa23.69■■□□□ 1.38
SH3D19-211ENST00000604030 PAIP2Q9BPZ3 127 aaKnown RBP23.68■■□□□ 1.38
SH3D19-211ENST00000604030 ATP6V0A2Q9Y487 856 aa23.68■■□□□ 1.38
SH3D19-211ENST00000604030 COMMD10Q9Y6G5 202 aa23.68■■□□□ 1.38
SH3D19-211ENST00000604030 LEO1Q8WVC0 666 aaPredicted RBP23.68■■□□□ 1.38
SH3D19-211ENST00000604030 RRAGDQ9NQL2 400 aaPredicted RBP23.68■■□□□ 1.38
SH3D19-211ENST00000604030 LMBRD1Q9NUN5 540 aa23.68■■□□□ 1.38
SH3D19-211ENST00000604030 ZEB2O60315 1214 aa23.68■■□□□ 1.38
SH3D19-211ENST00000604030 CCDC50Q8IVM0 306 aa23.68■■□□□ 1.38
SH3D19-211ENST00000604030 IFT81Q8WYA0 676 aa23.68■■□□□ 1.38
SH3D19-211ENST00000604030 MCM7P33993 719 aa23.67■■□□□ 1.38
SH3D19-211ENST00000604030 PABPN1LA6NDY0 278 aaKnown RBP23.67■■□□□ 1.38
SH3D19-211ENST00000604030 B4DLN1 442 aa23.67■■□□□ 1.38
SH3D19-211ENST00000604030 ACTN4O43707 911 aaKnown RBP23.67■■□□□ 1.38
SH3D19-211ENST00000604030 MRPL12P52815 198 aaKnown RBP23.67■■□□□ 1.38
SH3D19-211ENST00000604030 ZRANB1Q9UGI0 708 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms