RNA–Protein interactions for RNA: ENST00000603722.1

TUBE1-206, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-206ENST00000603722 ZNF70Q9UC06 446 aaPredicted RBP20.39■□□□□ 0.85
TUBE1-206ENST00000603722 POLR2AP24928 1970 aaKnown RBP20.38■□□□□ 0.85
TUBE1-206ENST00000603722 SRGAP3O43295 1099 aa20.38■□□□□ 0.85
TUBE1-206ENST00000603722 RASA3Q14644 834 aa20.38■□□□□ 0.85
TUBE1-206ENST00000603722 COPRSQ9NQ92 184 aa20.38■□□□□ 0.85
TUBE1-206ENST00000603722 RNF186Q9NXI6 227 aa20.38■□□□□ 0.85
TUBE1-206ENST00000603722 TRPA1O75762 1119 aa20.37■□□□□ 0.85
TUBE1-206ENST00000603722 NBPF12Q5TAG4 269 aaPredicted RBP20.37■□□□□ 0.85
TUBE1-206ENST00000603722 PPP1R12BO60237 982 aaPredicted RBP20.36■□□□□ 0.85
TUBE1-206ENST00000603722 TNFAIP1Q13829 316 aa20.36■□□□□ 0.85
TUBE1-206ENST00000603722 SUPT20HL1Q3ZLR7 823 aa20.36■□□□□ 0.85
TUBE1-206ENST00000603722 LDLRAD1Q5T700 205 aa20.36■□□□□ 0.85
TUBE1-206ENST00000603722 ZKSCAN2Q63HK3 967 aa20.36■□□□□ 0.85
TUBE1-206ENST00000603722 REM2Q8IYK8 340 aaPredicted RBP20.36■□□□□ 0.85
TUBE1-206ENST00000603722 TEKT1Q969V4 418 aa20.36■□□□□ 0.85
TUBE1-206ENST00000603722 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.36■□□□□ 0.85
TUBE1-206ENST00000603722 ARAP2Q8WZ64 1704 aa20.36■□□□□ 0.85
TUBE1-206ENST00000603722 TCP10L2B9ZVM9 353 aa20.35■□□□□ 0.85
TUBE1-206ENST00000603722 GNAI2P04899 355 aa20.35■□□□□ 0.85
TUBE1-206ENST00000603722 HDLBPQ00341 1268 aaKnown RBP20.35■□□□□ 0.85
TUBE1-206ENST00000603722 MTX1Q13505 466 aa20.35■□□□□ 0.85
TUBE1-206ENST00000603722 TMEM57Q8N5G2 664 aa20.35■□□□□ 0.85
TUBE1-206ENST00000603722 MAST3O60307 1309 aa20.34■□□□□ 0.85
TUBE1-206ENST00000603722 ZBED9Q6R2W3 1325 aa20.34■□□□□ 0.85
TUBE1-206ENST00000603722 MAP3K11Q16584 847 aa20.34■□□□□ 0.85
TUBE1-206ENST00000603722 WDR66Q8TBY9 1149 aa20.34■□□□□ 0.85
TUBE1-206ENST00000603722 SUGT1Q9Y2Z0 365 aa20.34■□□□□ 0.85
TUBE1-206ENST00000603722 ADORA1P30542 326 aa20.33■□□□□ 0.85
TUBE1-206ENST00000603722 PHKA1P46020 1223 aa20.33■□□□□ 0.85
TUBE1-206ENST00000603722 CDAN1Q8IWY9 1227 aa20.33■□□□□ 0.85
TUBE1-206ENST00000603722 ABHD8Q96I13 439 aa20.33■□□□□ 0.85
TUBE1-206ENST00000603722 ZDHHC15Q96MV8 337 aa20.33■□□□□ 0.85
TUBE1-206ENST00000603722 TMEM39BQ9GZU3 492 aa20.33■□□□□ 0.85
TUBE1-206ENST00000603722 GNL3LQ9NVN8 582 aaKnown RBP20.33■□□□□ 0.85
TUBE1-206ENST00000603722 CACNB3P54284 484 aa20.32■□□□□ 0.84
TUBE1-206ENST00000603722 CLMNQ96JQ2 1002 aa20.32■□□□□ 0.84
TUBE1-206ENST00000603722 IREB2P48200 963 aaKnown RBP20.31■□□□□ 0.84
TUBE1-206ENST00000603722 TNNI2P48788 182 aa20.31■□□□□ 0.84
TUBE1-206ENST00000603722 TFCP2Q12800 502 aa20.31■□□□□ 0.84
TUBE1-206ENST00000603722 SPRYD7Q5W111 196 aa20.31■□□□□ 0.84
TUBE1-206ENST00000603722 APOBEC3HQ6NTF7 200 aaKnown RBP20.31■□□□□ 0.84
TUBE1-206ENST00000603722 FTSJ3Q8IY81 847 aaKnown RBP20.31■□□□□ 0.84
TUBE1-206ENST00000603722 SLC10A4Q96EP9 437 aa20.31■□□□□ 0.84
TUBE1-206ENST00000603722 TEPSINQ96N21 525 aa20.31■□□□□ 0.84
TUBE1-206ENST00000603722 PNMA6EA0A0J9YXQ4 647 aa20.3■□□□□ 0.84
TUBE1-206ENST00000603722 PRDX5P30044 214 aa20.3■□□□□ 0.84
TUBE1-206ENST00000603722 SREBF2Q12772 1141 aa20.3■□□□□ 0.84
TUBE1-206ENST00000603722 CCDC102BQ68D86 513 aa20.3■□□□□ 0.84
TUBE1-206ENST00000603722 MRIQ9BWK5 157 aa20.3■□□□□ 0.84
TUBE1-206ENST00000603722 MCOLN1Q9GZU1 580 aa20.3■□□□□ 0.84
TUBE1-206ENST00000603722 TMOD2Q9NZR1 351 aa20.3■□□□□ 0.84
TUBE1-206ENST00000603722 A0A1B0GUL7 405 aa20.29■□□□□ 0.84
TUBE1-206ENST00000603722 USP2O75604 605 aaPredicted RBP20.29■□□□□ 0.84
TUBE1-206ENST00000603722 TM4SF4P48230 202 aa20.29■□□□□ 0.84
TUBE1-206ENST00000603722 TIMM10P62072 90 aa20.29■□□□□ 0.84
TUBE1-206ENST00000603722 DGKZQ13574 1117 aa20.29■□□□□ 0.84
TUBE1-206ENST00000603722 HHIPL2Q6UWX4 724 aa20.29■□□□□ 0.84
TUBE1-206ENST00000603722 WNK4Q96J92 1243 aa20.29■□□□□ 0.84
TUBE1-206ENST00000603722 DENND2AQ9ULE3 1009 aa20.29■□□□□ 0.84
TUBE1-206ENST00000603722 ECM29Q5VYK3 1845 aa20.28■□□□□ 0.84
TUBE1-206ENST00000603722 SEMA3EO15041 775 aa20.28■□□□□ 0.84
TUBE1-206ENST00000603722 DIXDC1Q155Q3 683 aa20.28■□□□□ 0.84
TUBE1-206ENST00000603722 ITPRIPQ8IWB1 547 aa20.28■□□□□ 0.84
TUBE1-206ENST00000603722 ANKRD13AQ8IZ07 590 aa20.28■□□□□ 0.84
TUBE1-206ENST00000603722 AKAP2Q9Y2D5 859 aa20.28■□□□□ 0.84
TUBE1-206ENST00000603722 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.28■□□□□ 0.84
TUBE1-206ENST00000603722 SALL1Q9NSC2 1324 aa20.27■□□□□ 0.84
TUBE1-206ENST00000603722 UNCXA6NJT0 531 aa20.27■□□□□ 0.84
TUBE1-206ENST00000603722 TBC1D8O95759 1140 aa20.27■□□□□ 0.84
TUBE1-206ENST00000603722 LDHBP07195 334 aaKnown RBP20.27■□□□□ 0.84
TUBE1-206ENST00000603722 ZBTB48P10074 688 aaPredicted RBP20.27■□□□□ 0.84
TUBE1-206ENST00000603722 XAGE2Q96GT9 111 aa20.27■□□□□ 0.84
TUBE1-206ENST00000603722 C1orf115Q9H7X2 142 aa20.27■□□□□ 0.84
TUBE1-206ENST00000603722 DAGLAQ9Y4D2 1042 aa20.27■□□□□ 0.84
TUBE1-206ENST00000603722 RLBP1P12271 317 aa20.26■□□□□ 0.83
TUBE1-206ENST00000603722 RASGRF1Q13972 1273 aa20.26■□□□□ 0.83
TUBE1-206ENST00000603722 MVPQ14764 893 aaKnown RBP20.26■□□□□ 0.83
TUBE1-206ENST00000603722 MANSC4A6NHS7 340 aaPredicted RBP20.25■□□□□ 0.83
TUBE1-206ENST00000603722 GJA5P36382 358 aa20.25■□□□□ 0.83
TUBE1-206ENST00000603722 G3BP1Q13283 466 aaKnown RBP eCLIP20.25■□□□□ 0.83
TUBE1-206ENST00000603722 FAM83AQ86UY5 434 aa20.25■□□□□ 0.83
TUBE1-206ENST00000603722 NEUROD6Q96NK8 337 aa20.25■□□□□ 0.83
TUBE1-206ENST00000603722 ELP3Q9H9T3 547 aa20.25■□□□□ 0.83
TUBE1-206ENST00000603722 CCDC85CA6NKD9 419 aa20.24■□□□□ 0.83
TUBE1-206ENST00000603722 FKBP1CQ5VVH2 108 aa20.24■□□□□ 0.83
TUBE1-206ENST00000603722 ZGPATQ8N5A5 531 aaKnown RBP20.24■□□□□ 0.83
TUBE1-206ENST00000603722 ZBTB22O15209 634 aa20.23■□□□□ 0.83
TUBE1-206ENST00000603722 VGLL4Q14135 290 aa20.23■□□□□ 0.83
TUBE1-206ENST00000603722 CDC42EP5Q6NZY7 148 aa20.23■□□□□ 0.83
TUBE1-206ENST00000603722 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.23■□□□□ 0.83
TUBE1-206ENST00000603722 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.23■□□□□ 0.83
TUBE1-206ENST00000603722 ZNF296Q8WUU4 475 aaPredicted RBP20.23■□□□□ 0.83
TUBE1-206ENST00000603722 OPTNQ96CV9 577 aa20.23■□□□□ 0.83
TUBE1-206ENST00000603722 ABCF2Q9UG63 623 aa20.23■□□□□ 0.83
TUBE1-206ENST00000603722 PDS5AQ29RF7 1337 aaKnown RBP20.23■□□□□ 0.83
TUBE1-206ENST00000603722 INHBEP58166 350 aa20.22■□□□□ 0.83
TUBE1-206ENST00000603722 MAP3K9P80192 1104 aa20.22■□□□□ 0.83
TUBE1-206ENST00000603722 POLA2Q14181 598 aa20.22■□□□□ 0.83
TUBE1-206ENST00000603722 GORABQ5T7V8 394 aa20.22■□□□□ 0.83
TUBE1-206ENST00000603722 DZIP1Q86YF9 867 aaKnown RBP20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms