RNA–Protein interactions for RNA: ENST00000602086.5

ZNF548-212, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-212ENST00000602086 ST18O60284 1047 aa17.2■□□□□ 0.34
ZNF548-212ENST00000602086 GNAT2P19087 354 aa17.2■□□□□ 0.34
ZNF548-212ENST00000602086 KCNA3P22001 575 aa17.2■□□□□ 0.34
ZNF548-212ENST00000602086 MCM2P49736 904 aa17.2■□□□□ 0.34
ZNF548-212ENST00000602086 KRT32Q14532 448 aa17.2■□□□□ 0.34
ZNF548-212ENST00000602086 ALX1Q15699 326 aa17.2■□□□□ 0.34
ZNF548-212ENST00000602086 SOGA3Q5TF21 947 aa17.2■□□□□ 0.34
ZNF548-212ENST00000602086 IFFO2Q5TF58 517 aa17.2■□□□□ 0.34
ZNF548-212ENST00000602086 CCDC129Q6ZRS4 1044 aa17.2■□□□□ 0.34
ZNF548-212ENST00000602086 SLC51AQ86UW1 340 aa17.2■□□□□ 0.34
ZNF548-212ENST00000602086 MAGEB6Q8N7X4 407 aa17.2■□□□□ 0.34
ZNF548-212ENST00000602086 TBC1D2Q9BYX2 928 aa17.2■□□□□ 0.34
ZNF548-212ENST00000602086 DAXXQ9UER7 740 aaPredicted RBP17.2■□□□□ 0.34
ZNF548-212ENST00000602086 IQSEC3Q9UPP2 1182 aaPredicted RBP17.2■□□□□ 0.34
ZNF548-212ENST00000602086 HSPA6P17066 643 aa17.19■□□□□ 0.34
ZNF548-212ENST00000602086 SLFNL1Q499Z3 407 aa17.19■□□□□ 0.34
ZNF548-212ENST00000602086 HSCBQ8IWL3 235 aa17.19■□□□□ 0.34
ZNF548-212ENST00000602086 STRBPQ96SI9 672 aaKnown RBP17.19■□□□□ 0.34
ZNF548-212ENST00000602086 VPS33BQ9H267 617 aa17.19■□□□□ 0.34
ZNF548-212ENST00000602086 RAI14Q9P0K7 980 aa17.19■□□□□ 0.34
ZNF548-212ENST00000602086 ABCF2Q9UG63 623 aa17.19■□□□□ 0.34
ZNF548-212ENST00000602086 SUGT1Q9Y2Z0 365 aa17.19■□□□□ 0.34
ZNF548-212ENST00000602086 CEP350Q5VT06 3117 aa17.19■□□□□ 0.34
ZNF548-212ENST00000602086 DPEP1P16444 411 aa17.18■□□□□ 0.34
ZNF548-212ENST00000602086 PSMA5P28066 241 aa17.18■□□□□ 0.34
ZNF548-212ENST00000602086 RASEFQ8IZ41 740 aa17.18■□□□□ 0.34
ZNF548-212ENST00000602086 RTKN2Q8IZC4 609 aa17.18■□□□□ 0.34
ZNF548-212ENST00000602086 AIDAQ96BJ3 306 aa17.18■□□□□ 0.34
ZNF548-212ENST00000602086 NSUN4Q96CB9 384 aaKnown RBP17.18■□□□□ 0.34
ZNF548-212ENST00000602086 ARFGEF1Q9Y6D6 1849 aa17.18■□□□□ 0.34
ZNF548-212ENST00000602086 CYP7A1P22680 504 aa17.17■□□□□ 0.34
ZNF548-212ENST00000602086 CCDC93Q567U6 631 aa17.17■□□□□ 0.34
ZNF548-212ENST00000602086 NAA16Q6N069 864 aaPredicted RBP17.17■□□□□ 0.34
ZNF548-212ENST00000602086 PODNQ7Z5L7 613 aa17.17■□□□□ 0.34
ZNF548-212ENST00000602086 CERS3Q8IU89 383 aa17.17■□□□□ 0.34
ZNF548-212ENST00000602086 PSMD1Q99460 953 aa17.17■□□□□ 0.34
ZNF548-212ENST00000602086 KIF3CO14782 793 aa17.16■□□□□ 0.34
ZNF548-212ENST00000602086 FOXP2O15409 715 aa17.16■□□□□ 0.34
ZNF548-212ENST00000602086 LDHBP07195 334 aaKnown RBP17.16■□□□□ 0.34
ZNF548-212ENST00000602086 FKBP1AP62942 108 aaKnown RBP17.16■□□□□ 0.34
ZNF548-212ENST00000602086 GSTO1P78417 241 aa17.16■□□□□ 0.34
ZNF548-212ENST00000602086 CHAF1AQ13111 956 aaPredicted RBP17.16■□□□□ 0.34
ZNF548-212ENST00000602086 VPS53Q5VIR6 699 aa17.16■□□□□ 0.34
ZNF548-212ENST00000602086 GPR101Q96P66 508 aaPredicted RBP17.16■□□□□ 0.34
ZNF548-212ENST00000602086 ALDH8A1Q9H2A2 487 aaPredicted RBP17.16■□□□□ 0.34
ZNF548-212ENST00000602086 ZSWIM6Q9HCJ5 1215 aa17.16■□□□□ 0.34
ZNF548-212ENST00000602086 PIM2Q9P1W9 311 aa17.16■□□□□ 0.34
ZNF548-212ENST00000602086 LAMA4Q16363 1823 aa17.15■□□□□ 0.34
ZNF548-212ENST00000602086 PATL2C9JE40 543 aaKnown RBP17.15■□□□□ 0.34
ZNF548-212ENST00000602086 LDHCP07864 332 aa17.15■□□□□ 0.34
ZNF548-212ENST00000602086 MECOMQ03112 1051 aa17.15■□□□□ 0.34
ZNF548-212ENST00000602086 KIAA2012Q0VF49 1180 aa17.15■□□□□ 0.34
ZNF548-212ENST00000602086 OLFM4Q6UX06 510 aa17.15■□□□□ 0.34
ZNF548-212ENST00000602086 ZNF384Q8TF68 577 aa17.15■□□□□ 0.34
ZNF548-212ENST00000602086 BCS1LQ9Y276 419 aa17.15■□□□□ 0.34
ZNF548-212ENST00000602086 A0A0G2JLW4 131 aa17.14■□□□□ 0.33
ZNF548-212ENST00000602086 MAGEB6P1A0A0J9YX57 407 aa17.14■□□□□ 0.33
ZNF548-212ENST00000602086 K7ELQ4 463 aaPredicted RBP17.14■□□□□ 0.33
ZNF548-212ENST00000602086 MBD4O95243 580 aa17.14■□□□□ 0.33
ZNF548-212ENST00000602086 FGAP02671 866 aa17.14■□□□□ 0.33
ZNF548-212ENST00000602086 CYP21A2P08686 494 aa17.14■□□□□ 0.33
ZNF548-212ENST00000602086 HMGB1P09429 215 aaKnown RBP17.14■□□□□ 0.33
ZNF548-212ENST00000602086 NEK4P51957 841 aa17.14■□□□□ 0.33
ZNF548-212ENST00000602086 GIMAP6Q6P9H5 292 aa17.14■□□□□ 0.33
ZNF548-212ENST00000602086 SLF2Q8IX21 1173 aa17.14■□□□□ 0.33
ZNF548-212ENST00000602086 FAM163AQ96GL9 167 aaPredicted RBP17.14■□□□□ 0.33
ZNF548-212ENST00000602086 RIOK1Q9BRS2 568 aaKnown RBP17.14■□□□□ 0.33
ZNF548-212ENST00000602086 WDR90Q96KV7 1748 aa17.13■□□□□ 0.33
ZNF548-212ENST00000602086 RIMBP2O15034 1052 aa17.13■□□□□ 0.33
ZNF548-212ENST00000602086 PRDX5P30044 214 aa17.13■□□□□ 0.33
ZNF548-212ENST00000602086 IMMTQ16891 758 aaKnown RBP17.13■□□□□ 0.33
ZNF548-212ENST00000602086 DZIP1Q86YF9 867 aaKnown RBP17.13■□□□□ 0.33
ZNF548-212ENST00000602086 TTC14Q96N46 770 aa17.13■□□□□ 0.33
ZNF548-212ENST00000602086 NACAP1Q9BZK3 213 aa17.13■□□□□ 0.33
ZNF548-212ENST00000602086 CYP46A1Q9Y6A2 500 aa17.13■□□□□ 0.33
ZNF548-212ENST00000602086 C21orf2O43822 256 aa17.12■□□□□ 0.33
ZNF548-212ENST00000602086 PPP4CP60510 307 aa17.12■□□□□ 0.33
ZNF548-212ENST00000602086 RUFY3Q7L099 469 aa17.12■□□□□ 0.33
ZNF548-212ENST00000602086 ADGRA1Q86SQ6 560 aa17.12■□□□□ 0.33
ZNF548-212ENST00000602086 JAKMIP1Q96N16 626 aaKnown RBP17.12■□□□□ 0.33
ZNF548-212ENST00000602086 PSME4Q14997 1843 aa17.12■□□□□ 0.33
ZNF548-212ENST00000602086 GSG1L2A8MUP6 293 aa17.11■□□□□ 0.33
ZNF548-212ENST00000602086 G3V3G9 751 aa17.11■□□□□ 0.33
ZNF548-212ENST00000602086 CD2BP2O95400 341 aaKnown RBP17.11■□□□□ 0.33
ZNF548-212ENST00000602086 CASTP20810 708 aaKnown RBP17.11■□□□□ 0.33
ZNF548-212ENST00000602086 ADCK5Q3MIX3 580 aa17.11■□□□□ 0.33
ZNF548-212ENST00000602086 DALRD3Q5D0E6 543 aaKnown RBP17.11■□□□□ 0.33
ZNF548-212ENST00000602086 MFSD14BQ5SR56 506 aa17.11■□□□□ 0.33
ZNF548-212ENST00000602086 DCAF8Q5TAQ9 597 aa17.11■□□□□ 0.33
ZNF548-212ENST00000602086 STRIP1Q5VSL9 837 aa17.11■□□□□ 0.33
ZNF548-212ENST00000602086 IFNL3Q8IZI9 196 aa17.11■□□□□ 0.33
ZNF548-212ENST00000602086 LCORLQ8N3X6 602 aa17.11■□□□□ 0.33
ZNF548-212ENST00000602086 NEK1Q96PY6 1258 aa17.11■□□□□ 0.33
ZNF548-212ENST00000602086 MRIQ9BWK5 157 aa17.11■□□□□ 0.33
ZNF548-212ENST00000602086 ARMT1Q9H993 441 aa17.11■□□□□ 0.33
ZNF548-212ENST00000602086 ZNF646O15015 1829 aaPredicted RBP17.11■□□□□ 0.33
ZNF548-212ENST00000602086 MYH2Q9UKX2 1941 aa17.11■□□□□ 0.33
ZNF548-212ENST00000602086 SBF1O95248 1867 aa17.1■□□□□ 0.33
ZNF548-212ENST00000602086 FER1L6Q2WGJ9 1857 aa17.1■□□□□ 0.33
ZNF548-212ENST00000602086 GTF2IP78347 998 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms