RNA–Protein interactions for RNA: ENST00000601614.6

SSBP4-211, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-211ENST00000601614 MAP3K9P80192 1104 aa20.46■□□□□ 0.87
SSBP4-211ENST00000601614 TWISTNBQ3B726 338 aaPredicted RBP20.46■□□□□ 0.87
SSBP4-211ENST00000601614 MFSD14BQ5SR56 506 aa20.46■□□□□ 0.87
SSBP4-211ENST00000601614 DNAAF4Q8WXU2 420 aa20.46■□□□□ 0.87
SSBP4-211ENST00000601614 MYH16Q9H6N6 1097 aa20.46■□□□□ 0.87
SSBP4-211ENST00000601614 RBM27Q9P2N5 1060 aaKnown RBP20.46■□□□□ 0.87
SSBP4-211ENST00000601614 TTF2Q9UNY4 1162 aaKnown RBP20.46■□□□□ 0.87
SSBP4-211ENST00000601614 PLIN1O60240 522 aa20.45■□□□□ 0.86
SSBP4-211ENST00000601614 TLR2O60603 784 aa20.45■□□□□ 0.86
SSBP4-211ENST00000601614 ECM2O94769 699 aaPredicted RBP20.45■□□□□ 0.86
SSBP4-211ENST00000601614 CTGFP29279 349 aa20.45■□□□□ 0.86
SSBP4-211ENST00000601614 LACTBP83111 547 aaPredicted RBP20.45■□□□□ 0.86
SSBP4-211ENST00000601614 IFIT5Q13325 482 aaKnown RBP20.45■□□□□ 0.86
SSBP4-211ENST00000601614 ARHGEF6Q15052 776 aa20.45■□□□□ 0.86
SSBP4-211ENST00000601614 MTFR1Q15390 333 aa20.45■□□□□ 0.86
SSBP4-211ENST00000601614 GRIK5Q16478 980 aa20.45■□□□□ 0.86
SSBP4-211ENST00000601614 EPHA10Q5JZY3 1008 aa20.45■□□□□ 0.86
SSBP4-211ENST00000601614 DZIP1LQ8IYY4 767 aaKnown RBP20.45■□□□□ 0.86
SSBP4-211ENST00000601614 LINS1Q8NG48 757 aa20.45■□□□□ 0.86
SSBP4-211ENST00000601614 TDRD7Q8NHU6 1098 aaKnown RBP20.45■□□□□ 0.86
SSBP4-211ENST00000601614 SERPINA10Q9UK55 444 aa20.45■□□□□ 0.86
SSBP4-211ENST00000601614 SPDYE5A6NIY4 337 aa20.44■□□□□ 0.86
SSBP4-211ENST00000601614 CHMP3Q9Y3E7 222 aa20.44■□□□□ 0.86
SSBP4-211ENST00000601614 SNCAIPQ9Y6H5 919 aa20.44■□□□□ 0.86
SSBP4-211ENST00000601614 BTBD19C9JJ37 291 aa20.43■□□□□ 0.86
SSBP4-211ENST00000601614 CRKP46108 304 aa20.43■□□□□ 0.86
SSBP4-211ENST00000601614 GYG1P46976 350 aa20.43■□□□□ 0.86
SSBP4-211ENST00000601614 FKBP5Q13451 457 aaPredicted RBP20.43■□□□□ 0.86
SSBP4-211ENST00000601614 CSADQ9Y600 493 aa20.42■□□□□ 0.86
SSBP4-211ENST00000601614 CACNB3P54284 484 aa20.41■□□□□ 0.86
SSBP4-211ENST00000601614 LMBR1LQ6UX01 489 aa20.41■□□□□ 0.86
SSBP4-211ENST00000601614 FAM84BQ96KN1 310 aaPredicted RBP20.41■□□□□ 0.86
SSBP4-211ENST00000601614 PRKRIP1Q9H875 184 aaPredicted RBP20.41■□□□□ 0.86
SSBP4-211ENST00000601614 MGAMO43451 1857 aa20.41■□□□□ 0.86
SSBP4-211ENST00000601614 IRF6O14896 467 aa20.4■□□□□ 0.86
SSBP4-211ENST00000601614 LDHAL6AQ6ZMR3 332 aa20.4■□□□□ 0.86
SSBP4-211ENST00000601614 UBE2Q1Q7Z7E8 422 aa20.4■□□□□ 0.86
SSBP4-211ENST00000601614 ZKSCAN4Q969J2 545 aaPredicted RBP20.4■□□□□ 0.86
SSBP4-211ENST00000601614 PRO3102Q9H379 93 aa20.4■□□□□ 0.86
SSBP4-211ENST00000601614 F6X3S4 739 aa20.39■□□□□ 0.85
SSBP4-211ENST00000601614 CETPP11597 493 aa20.39■□□□□ 0.85
SSBP4-211ENST00000601614 KIF22Q14807 665 aa20.39■□□□□ 0.85
SSBP4-211ENST00000601614 C17orf99Q6UX52 265 aa20.39■□□□□ 0.85
SSBP4-211ENST00000601614 ERO1BQ86YB8 467 aa20.39■□□□□ 0.85
SSBP4-211ENST00000601614 DPF3Q92784 378 aa20.39■□□□□ 0.85
SSBP4-211ENST00000601614 CNNM1Q9NRU3 951 aa20.39■□□□□ 0.85
SSBP4-211ENST00000601614 HIBADHP31937 336 aaKnown RBP20.38■□□□□ 0.85
SSBP4-211ENST00000601614 TNNI2P48788 182 aa20.38■□□□□ 0.85
SSBP4-211ENST00000601614 BEND3Q5T5X7 828 aa20.38■□□□□ 0.85
SSBP4-211ENST00000601614 TRIM47Q96LD4 638 aa20.38■□□□□ 0.85
SSBP4-211ENST00000601614 WRNIP1Q96S55 665 aa20.38■□□□□ 0.85
SSBP4-211ENST00000601614 PUS3Q9BZE2 481 aaKnown RBP20.38■□□□□ 0.85
SSBP4-211ENST00000601614 ZCCHC17Q9NP64 241 aaKnown RBP20.38■□□□□ 0.85
SSBP4-211ENST00000601614 ADGRA2Q96PE1 1338 aa20.37■□□□□ 0.85
SSBP4-211ENST00000601614 GNRH1P01148 92 aa20.37■□□□□ 0.85
SSBP4-211ENST00000601614 UBE4AQ14139 1066 aa20.37■□□□□ 0.85
SSBP4-211ENST00000601614 CPA4Q9UI42 421 aa20.37■□□□□ 0.85
SSBP4-211ENST00000601614 IQSEC3Q9UPP2 1182 aaPredicted RBP20.37■□□□□ 0.85
SSBP4-211ENST00000601614 OSBPP22059 807 aa20.36■□□□□ 0.85
SSBP4-211ENST00000601614 PRMT2P55345 433 aa20.36■□□□□ 0.85
SSBP4-211ENST00000601614 PPIL2Q13356 520 aa20.36■□□□□ 0.85
SSBP4-211ENST00000601614 SNAPC2Q13487 334 aa20.36■□□□□ 0.85
SSBP4-211ENST00000601614 CCDC57Q2TAC2 916 aa20.36■□□□□ 0.85
SSBP4-211ENST00000601614 WWC1Q8IX03 1113 aa20.36■□□□□ 0.85
SSBP4-211ENST00000601614 SRRDQ9UH36 339 aa20.36■□□□□ 0.85
SSBP4-211ENST00000601614 ALPK3Q96L96 1907 aa20.35■□□□□ 0.85
SSBP4-211ENST00000601614 PSMC4P43686 418 aa20.35■□□□□ 0.85
SSBP4-211ENST00000601614 TAF7LQ5H9L4 462 aa20.35■□□□□ 0.85
SSBP4-211ENST00000601614 AK9Q5TCS8 1911 aa20.34■□□□□ 0.85
SSBP4-211ENST00000601614 WDHD1O75717 1129 aaPredicted RBP20.34■□□□□ 0.85
SSBP4-211ENST00000601614 CCL5P13501 91 aa20.34■□□□□ 0.85
SSBP4-211ENST00000601614 GRK4P32298 578 aa20.34■□□□□ 0.85
SSBP4-211ENST00000601614 GJA8P48165 433 aa20.34■□□□□ 0.85
SSBP4-211ENST00000601614 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.34■□□□□ 0.85
SSBP4-211ENST00000601614 RIPOR2Q9Y4F9 1068 aa20.34■□□□□ 0.85
SSBP4-211ENST00000601614 GRM8O00222 908 aa20.33■□□□□ 0.85
SSBP4-211ENST00000601614 DLL1O00548 723 aa20.33■□□□□ 0.85
SSBP4-211ENST00000601614 VAMP4O75379 141 aa20.33■□□□□ 0.85
SSBP4-211ENST00000601614 INPP5BP32019 993 aa20.33■□□□□ 0.85
SSBP4-211ENST00000601614 CHAF1AQ13111 956 aaPredicted RBP20.33■□□□□ 0.85
SSBP4-211ENST00000601614 CCDC27Q2M243 656 aa20.33■□□□□ 0.85
SSBP4-211ENST00000601614 MYPNQ86TC9 1320 aa20.32■□□□□ 0.84
SSBP4-211ENST00000601614 FANCIQ9NVI1 1328 aa20.32■□□□□ 0.84
SSBP4-211ENST00000601614 MYH13Q9UKX3 1938 aa20.32■□□□□ 0.84
SSBP4-211ENST00000601614 GJB1P08034 283 aa20.32■□□□□ 0.84
SSBP4-211ENST00000601614 HDLBPQ00341 1268 aaKnown RBP20.32■□□□□ 0.84
SSBP4-211ENST00000601614 MOGSQ13724 837 aa20.32■□□□□ 0.84
SSBP4-211ENST00000601614 APOBEC3HQ6NTF7 200 aaKnown RBP20.32■□□□□ 0.84
SSBP4-211ENST00000601614 FBXO33Q7Z6M2 555 aa20.32■□□□□ 0.84
SSBP4-211ENST00000601614 COL6A3P12111 3177 aa20.32■□□□□ 0.84
SSBP4-211ENST00000601614 PDHXO00330 501 aa20.31■□□□□ 0.84
SSBP4-211ENST00000601614 SOX1O00570 391 aaPredicted RBP20.31■□□□□ 0.84
SSBP4-211ENST00000601614 CCDC184Q52MB2 194 aa20.31■□□□□ 0.84
SSBP4-211ENST00000601614 MIGA2Q7L4E1 593 aa20.31■□□□□ 0.84
SSBP4-211ENST00000601614 ANKRD23Q86SG2 305 aa20.31■□□□□ 0.84
SSBP4-211ENST00000601614 FAM83AQ86UY5 434 aa20.31■□□□□ 0.84
SSBP4-211ENST00000601614 SLC17A8Q8NDX2 589 aa20.31■□□□□ 0.84
SSBP4-211ENST00000601614 RAET1EQ8TD07 263 aa20.31■□□□□ 0.84
SSBP4-211ENST00000601614 TEKT1Q969V4 418 aa20.31■□□□□ 0.84
SSBP4-211ENST00000601614 KAZALD1Q96I82 304 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms