RNA–Protein interactions for RNA: ENST00000601592.5

USE1-209, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-209ENST00000601592 CCDC158Q5M9N0 1113 aa15.73■□□□□ 0.11
USE1-209ENST00000601592 CST9Q5W186 159 aa15.73■□□□□ 0.11
USE1-209ENST00000601592 PAXIP1Q6ZW49 1069 aaPredicted RBP15.73■□□□□ 0.11
USE1-209ENST00000601592 AACSQ86V21 672 aa15.73■□□□□ 0.11
USE1-209ENST00000601592 APOBEC3FQ8IUX4 373 aaKnown RBP15.73■□□□□ 0.11
USE1-209ENST00000601592 MTMR14Q8NCE2 650 aa15.73■□□□□ 0.11
USE1-209ENST00000601592 RHPN1Q8TCX5 695 aa15.73■□□□□ 0.11
USE1-209ENST00000601592 TEKT1Q969V4 418 aa15.73■□□□□ 0.11
USE1-209ENST00000601592 CDCA5Q96FF9 252 aa15.73■□□□□ 0.11
USE1-209ENST00000601592 ZBED3Q96IU2 234 aaPredicted RBP15.73■□□□□ 0.11
USE1-209ENST00000601592 PRMT6Q96LA8 375 aaPredicted RBP15.73■□□□□ 0.11
USE1-209ENST00000601592 ABCF2Q9UG63 623 aa15.73■□□□□ 0.11
USE1-209ENST00000601592 AK9Q5TCS8 1911 aa15.72■□□□□ 0.11
USE1-209ENST00000601592 UQCRFS1P1P0C7P4 283 aa15.72■□□□□ 0.11
USE1-209ENST00000601592 PRDX5P30044 214 aa15.72■□□□□ 0.11
USE1-209ENST00000601592 PI16Q6UXB8 463 aa15.72■□□□□ 0.11
USE1-209ENST00000601592 ZGPATQ8N5A5 531 aaKnown RBP15.72■□□□□ 0.11
USE1-209ENST00000601592 EAF2Q96CJ1 260 aaPredicted RBP15.72■□□□□ 0.11
USE1-209ENST00000601592 KLRG1Q96E93 195 aa15.72■□□□□ 0.11
USE1-209ENST00000601592 KIF1BPQ96EK5 621 aa15.72■□□□□ 0.11
USE1-209ENST00000601592 TLR7Q9NYK1 1049 aaKnown RBP15.72■□□□□ 0.11
USE1-209ENST00000601592 DBNLQ9UJU6 430 aaKnown RBP15.72■□□□□ 0.11
USE1-209ENST00000601592 SUGT1Q9Y2Z0 365 aa15.72■□□□□ 0.11
USE1-209ENST00000601592 AOX1Q06278 1338 aa15.71■□□□□ 0.11
USE1-209ENST00000601592 ARID4AP29374 1257 aaPredicted RBP15.71■□□□□ 0.11
USE1-209ENST00000601592 PRAMEF18Q5VWM3 479 aa15.71■□□□□ 0.11
USE1-209ENST00000601592 DZIP1Q86YF9 867 aaKnown RBP15.71■□□□□ 0.11
USE1-209ENST00000601592 SPATA5Q8NB90 893 aa15.71■□□□□ 0.11
USE1-209ENST00000601592 TDRD3Q9H7E2 651 aaKnown RBP15.71■□□□□ 0.11
USE1-209ENST00000601592 HMG20BQ9P0W2 317 aa15.71■□□□□ 0.11
USE1-209ENST00000601592 SUPT16HQ9Y5B9 1047 aaKnown RBP15.71■□□□□ 0.11
USE1-209ENST00000601592 SALL1Q9NSC2 1324 aa15.7■□□□□ 0.1
USE1-209ENST00000601592 MAST2Q6P0Q8 1798 aa15.7■□□□□ 0.1
USE1-209ENST00000601592 RAB11FIP3O75154 756 aa15.7■□□□□ 0.1
USE1-209ENST00000601592 MCAMP43121 646 aa15.7■□□□□ 0.1
USE1-209ENST00000601592 HDLBPQ00341 1268 aaKnown RBP15.7■□□□□ 0.1
USE1-209ENST00000601592 GRM1Q13255 1194 aa15.7■□□□□ 0.1
USE1-209ENST00000601592 CLASRPQ8N2M8 674 aaKnown RBP15.7■□□□□ 0.1
USE1-209ENST00000601592 DNAJC5GQ8N7S2 189 aa15.7■□□□□ 0.1
USE1-209ENST00000601592 SNRKQ9NRH2 765 aa15.7■□□□□ 0.1
USE1-209ENST00000601592 CNTNAP1P78357 1384 aa15.7■□□□□ 0.1
USE1-209ENST00000601592 PDS5AQ29RF7 1337 aaKnown RBP15.69■□□□□ 0.1
USE1-209ENST00000601592 IFIT2P09913 472 aaKnown RBP15.69■□□□□ 0.1
USE1-209ENST00000601592 NF2P35240 595 aa15.69■□□□□ 0.1
USE1-209ENST00000601592 DIXDC1Q155Q3 683 aa15.69■□□□□ 0.1
USE1-209ENST00000601592 DEFB115Q30KQ5 88 aa15.69■□□□□ 0.1
USE1-209ENST00000601592 SPTY2D1Q68D10 685 aaPredicted RBP15.69■□□□□ 0.1
USE1-209ENST00000601592 ERICH6Q7L0X2 663 aa15.69■□□□□ 0.1
USE1-209ENST00000601592 C2orf69Q8N8R5 385 aa15.69■□□□□ 0.1
USE1-209ENST00000601592 GBA2Q9HCG7 927 aaPredicted RBP15.69■□□□□ 0.1
USE1-209ENST00000601592 TMOD2Q9NZR1 351 aa15.69■□□□□ 0.1
USE1-209ENST00000601592 ZNF70Q9UC06 446 aaPredicted RBP15.69■□□□□ 0.1
USE1-209ENST00000601592 TLL2Q9Y6L7 1015 aa15.69■□□□□ 0.1
USE1-209ENST00000601592 PAPPA2Q9BXP8 1791 aa15.69■□□□□ 0.1
USE1-209ENST00000601592 TCP10L2B9ZVM9 353 aa15.68■□□□□ 0.1
USE1-209ENST00000601592 TTLL12Q14166 644 aaPredicted RBP15.68■□□□□ 0.1
USE1-209ENST00000601592 SPDYE2Q495Y8 402 aa15.68■□□□□ 0.1
USE1-209ENST00000601592 TBC1D9Q6ZT07 1266 aa15.68■□□□□ 0.1
USE1-209ENST00000601592 ZDHHC15Q96MV8 337 aa15.68■□□□□ 0.1
USE1-209ENST00000601592 DEFB129Q9H1M3 183 aa15.68■□□□□ 0.1
USE1-209ENST00000601592 PCDHB15Q9Y5E8 787 aa15.68■□□□□ 0.1
USE1-209ENST00000601592 RASSF10A6NK89 507 aa15.67■□□□□ 0.1
USE1-209ENST00000601592 CACNB3P54284 484 aa15.67■□□□□ 0.1
USE1-209ENST00000601592 HUNKP57058 714 aa15.67■□□□□ 0.1
USE1-209ENST00000601592 TNFAIP1Q13829 316 aa15.67■□□□□ 0.1
USE1-209ENST00000601592 HHIPL2Q6UWX4 724 aa15.67■□□□□ 0.1
USE1-209ENST00000601592 LRRCC1Q9C099 1032 aa15.67■□□□□ 0.1
USE1-209ENST00000601592 RAI14Q9P0K7 980 aa15.67■□□□□ 0.1
USE1-209ENST00000601592 LRP2BPQ9P2M1 347 aa15.67■□□□□ 0.1
USE1-209ENST00000601592 DAGLAQ9Y4D2 1042 aa15.67■□□□□ 0.1
USE1-209ENST00000601592 ZBTB22O15209 634 aa15.66■□□□□ 0.1
USE1-209ENST00000601592 SMARCA5O60264 1052 aaPredicted RBP15.66■□□□□ 0.1
USE1-209ENST00000601592 TNNI2P48788 182 aa15.66■□□□□ 0.1
USE1-209ENST00000601592 PRKG1Q13976 671 aa15.66■□□□□ 0.1
USE1-209ENST00000601592 CYP4F22Q6NT55 531 aa15.66■□□□□ 0.1
USE1-209ENST00000601592 SAPCD2Q86UD0 394 aa15.66■□□□□ 0.1
USE1-209ENST00000601592 SLF2Q8IX21 1173 aa15.66■□□□□ 0.1
USE1-209ENST00000601592 MRIQ9BWK5 157 aa15.66■□□□□ 0.1
USE1-209ENST00000601592 DOCK2Q92608 1830 aa15.66■□□□□ 0.1
USE1-209ENST00000601592 ZAP70P43403 619 aa15.65■□□□□ 0.1
USE1-209ENST00000601592 VEGFBP49765 207 aa15.65■□□□□ 0.1
USE1-209ENST00000601592 IRX6P78412 446 aaPredicted RBP15.65■□□□□ 0.1
USE1-209ENST00000601592 MECOMQ03112 1051 aa15.65■□□□□ 0.1
USE1-209ENST00000601592 RASA3Q14644 834 aa15.65■□□□□ 0.1
USE1-209ENST00000601592 APOBEC3HQ6NTF7 200 aaKnown RBP15.65■□□□□ 0.1
USE1-209ENST00000601592 EXOC6Q8TAG9 804 aa15.65■□□□□ 0.1
USE1-209ENST00000601592 CAPNS2Q96L46 248 aa15.65■□□□□ 0.1
USE1-209ENST00000601592 PPP2R3BQ9Y5P8 575 aa15.65■□□□□ 0.1
USE1-209ENST00000601592 NDUFB9Q9Y6M9 179 aa15.65■□□□□ 0.1
USE1-209ENST00000601592 ECE1P42892 770 aa15.64■□□□□ 0.09
USE1-209ENST00000601592 MOB2Q70IA6 237 aa15.64■□□□□ 0.09
USE1-209ENST00000601592 ZNF512BQ96KM6 892 aaPredicted RBP15.64■□□□□ 0.09
USE1-209ENST00000601592 DCTPP1Q9H773 170 aa15.64■□□□□ 0.09
USE1-209ENST00000601592 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.64■□□□□ 0.09
USE1-209ENST00000601592 MYH7P12883 1935 aa15.64■□□□□ 0.09
USE1-209ENST00000601592 CYP2E1P05181 493 aaPredicted RBP15.63■□□□□ 0.09
USE1-209ENST00000601592 GSTO1P78417 241 aa15.63■□□□□ 0.09
USE1-209ENST00000601592 CDC42EP5Q6NZY7 148 aa15.63■□□□□ 0.09
USE1-209ENST00000601592 TMEM39BQ9GZU3 492 aa15.63■□□□□ 0.09
USE1-209ENST00000601592 USP40Q9NVE5 1235 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms