RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 IL15P40933 162 aaPredicted RBP28.23■■■□□ 2.11
SSBP4-209ENST00000601357 HDLBPQ00341 1268 aaKnown RBP28.23■■■□□ 2.11
SSBP4-209ENST00000601357 MTX1Q13505 466 aa28.23■■■□□ 2.11
SSBP4-209ENST00000601357 PRKG1Q13976 671 aa28.23■■■□□ 2.11
SSBP4-209ENST00000601357 FRAT1Q92837 279 aaPredicted RBP28.23■■■□□ 2.11
SSBP4-209ENST00000601357 ZNF70Q9UC06 446 aaPredicted RBP28.23■■■□□ 2.11
SSBP4-209ENST00000601357 PA2G4Q9UQ80 394 aaKnown RBP28.23■■■□□ 2.11
SSBP4-209ENST00000601357 RASA3Q14644 834 aa28.22■■■□□ 2.11
SSBP4-209ENST00000601357 TDRD3Q9H7E2 651 aaKnown RBP28.22■■■□□ 2.11
SSBP4-209ENST00000601357 CEP126Q9P2H0 1117 aa28.22■■■□□ 2.11
SSBP4-209ENST00000601357 FZD1Q9UP38 647 aa28.22■■■□□ 2.11
SSBP4-209ENST00000601357 ATP2B3Q16720 1220 aa28.21■■■□□ 2.11
SSBP4-209ENST00000601357 MRIQ9BWK5 157 aa28.21■■■□□ 2.11
SSBP4-209ENST00000601357 ANGEL1Q9UNK9 670 aaKnown RBP28.21■■■□□ 2.11
SSBP4-209ENST00000601357 SUGT1Q9Y2Z0 365 aa28.21■■■□□ 2.11
SSBP4-209ENST00000601357 LAMB1P07942 1786 aa28.21■■■□□ 2.11
SSBP4-209ENST00000601357 TRPA1O75762 1119 aa28.2■■■□□ 2.1
SSBP4-209ENST00000601357 TNFAIP1Q13829 316 aa28.2■■■□□ 2.1
SSBP4-209ENST00000601357 SUPT20HL1Q3ZLR7 823 aa28.2■■■□□ 2.1
SSBP4-209ENST00000601357 NBPF12Q5TAG4 269 aaPredicted RBP28.2■■■□□ 2.1
SSBP4-209ENST00000601357 SRGAP3O43295 1099 aa28.18■■■□□ 2.1
SSBP4-209ENST00000601357 PPP1R12BO60237 982 aaPredicted RBP28.18■■■□□ 2.1
SSBP4-209ENST00000601357 TEKT1Q969V4 418 aa28.18■■■□□ 2.1
SSBP4-209ENST00000601357 CLUAP1Q96AJ1 413 aa28.18■■■□□ 2.1
SSBP4-209ENST00000601357 UNCXA6NJT0 531 aa28.17■■■□□ 2.1
SSBP4-209ENST00000601357 ZBTB22O15209 634 aa28.17■■■□□ 2.1
SSBP4-209ENST00000601357 TM4SF4P48230 202 aa28.17■■■□□ 2.1
SSBP4-209ENST00000601357 WDR66Q8TBY9 1149 aa28.17■■■□□ 2.1
SSBP4-209ENST00000601357 ABHD8Q96I13 439 aa28.17■■■□□ 2.1
SSBP4-209ENST00000601357 ZDHHC15Q96MV8 337 aa28.17■■■□□ 2.1
SSBP4-209ENST00000601357 TEPSINQ96N21 525 aa28.17■■■□□ 2.1
SSBP4-209ENST00000601357 MAST3O60307 1309 aa28.17■■■□□ 2.1
SSBP4-209ENST00000601357 ZBED9Q6R2W3 1325 aa28.17■■■□□ 2.1
SSBP4-209ENST00000601357 ZKSCAN2Q63HK3 967 aa28.16■■■□□ 2.1
SSBP4-209ENST00000601357 OTOFQ9HC10 1997 aa28.16■■■□□ 2.1
SSBP4-209ENST00000601357 SPRYD7Q5W111 196 aa28.15■■■□□ 2.1
SSBP4-209ENST00000601357 USP2O75604 605 aaPredicted RBP28.14■■■□□ 2.1
SSBP4-209ENST00000601357 GNAI2P04899 355 aa28.14■■■□□ 2.1
SSBP4-209ENST00000601357 HHIPL2Q6UWX4 724 aa28.14■■■□□ 2.1
SSBP4-209ENST00000601357 TMEM57Q8N5G2 664 aa28.14■■■□□ 2.1
SSBP4-209ENST00000601357 CLMNQ96JQ2 1002 aa28.14■■■□□ 2.1
SSBP4-209ENST00000601357 TCP10L2B9ZVM9 353 aa28.13■■■□□ 2.09
SSBP4-209ENST00000601357 PHKA1P46020 1223 aa28.13■■■□□ 2.09
SSBP4-209ENST00000601357 MKRN3Q13064 507 aaKnown RBP28.13■■■□□ 2.09
SSBP4-209ENST00000601357 APOBEC3HQ6NTF7 200 aaKnown RBP28.13■■■□□ 2.09
SSBP4-209ENST00000601357 CDAN1Q8IWY9 1227 aa28.13■■■□□ 2.09
SSBP4-209ENST00000601357 SEMA3EO15041 775 aa28.12■■■□□ 2.09
SSBP4-209ENST00000601357 TMEM39BQ9GZU3 492 aa28.12■■■□□ 2.09
SSBP4-209ENST00000601357 GNL3LQ9NVN8 582 aaKnown RBP28.12■■■□□ 2.09
SSBP4-209ENST00000601357 SALL1Q9NSC2 1324 aa28.12■■■□□ 2.09
SSBP4-209ENST00000601357 ADORA1P30542 326 aa28.11■■■□□ 2.09
SSBP4-209ENST00000601357 IREB2P48200 963 aaKnown RBP28.11■■■□□ 2.09
SSBP4-209ENST00000601357 TNNI2P48788 182 aa28.11■■■□□ 2.09
SSBP4-209ENST00000601357 SREBF2Q12772 1141 aa28.11■■■□□ 2.09
SSBP4-209ENST00000601357 SLC10A4Q96EP9 437 aa28.11■■■□□ 2.09
SSBP4-209ENST00000601357 PNMA6EA0A0J9YXQ4 647 aa28.1■■■□□ 2.09
SSBP4-209ENST00000601357 ZBTB48P10074 688 aaPredicted RBP28.1■■■□□ 2.09
SSBP4-209ENST00000601357 TIMM10P62072 90 aa28.1■■■□□ 2.09
SSBP4-209ENST00000601357 TFCP2Q12800 502 aa28.1■■■□□ 2.09
SSBP4-209ENST00000601357 FKBP1CQ5VVH2 108 aa28.1■■■□□ 2.09
SSBP4-209ENST00000601357 CCDC102BQ68D86 513 aa28.1■■■□□ 2.09
SSBP4-209ENST00000601357 MCOLN1Q9GZU1 580 aa28.1■■■□□ 2.09
SSBP4-209ENST00000601357 DENND2AQ9ULE3 1009 aa28.1■■■□□ 2.09
SSBP4-209ENST00000601357 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.1■■■□□ 2.09
SSBP4-209ENST00000601357 PRDX5P30044 214 aa28.09■■■□□ 2.09
SSBP4-209ENST00000601357 CACNB3P54284 484 aa28.09■■■□□ 2.09
SSBP4-209ENST00000601357 ANKRD13AQ8IZ07 590 aa28.09■■■□□ 2.09
SSBP4-209ENST00000601357 WNK4Q96J92 1243 aa28.09■■■□□ 2.09
SSBP4-209ENST00000601357 FAM83AQ86UY5 434 aa28.08■■■□□ 2.09
SSBP4-209ENST00000601357 AKAP2Q9Y2D5 859 aa28.08■■■□□ 2.09
SSBP4-209ENST00000601357 A0A1B0GUL7 405 aa28.07■■■□□ 2.08
SSBP4-209ENST00000601357 DGKZQ13574 1117 aa28.07■■■□□ 2.08
SSBP4-209ENST00000601357 CFHR5Q9BXR6 569 aa28.07■■■□□ 2.08
SSBP4-209ENST00000601357 DAGLAQ9Y4D2 1042 aa28.07■■■□□ 2.08
SSBP4-209ENST00000601357 PDS5AQ29RF7 1337 aaKnown RBP28.07■■■□□ 2.08
SSBP4-209ENST00000601357 MANSC4A6NHS7 340 aaPredicted RBP28.06■■■□□ 2.08
SSBP4-209ENST00000601357 RASGRF1Q13972 1273 aa28.06■■■□□ 2.08
SSBP4-209ENST00000601357 DIXDC1Q155Q3 683 aa28.06■■■□□ 2.08
SSBP4-209ENST00000601357 XAGE2Q96GT9 111 aa28.06■■■□□ 2.08
SSBP4-209ENST00000601357 TMOD2Q9NZR1 351 aa28.06■■■□□ 2.08
SSBP4-209ENST00000601357 TBC1D8O95759 1140 aa28.05■■■□□ 2.08
SSBP4-209ENST00000601357 LDHBP07195 334 aaKnown RBP28.05■■■□□ 2.08
SSBP4-209ENST00000601357 RLBP1P12271 317 aa28.05■■■□□ 2.08
SSBP4-209ENST00000601357 GJA5P36382 358 aa28.05■■■□□ 2.08
SSBP4-209ENST00000601357 INHBEP58166 350 aa28.05■■■□□ 2.08
SSBP4-209ENST00000601357 NOM1Q5C9Z4 860 aaKnown RBP28.05■■■□□ 2.08
SSBP4-209ENST00000601357 RPAP1Q9BWH6 1393 aaPredicted RBP28.05■■■□□ 2.08
SSBP4-209ENST00000601357 POLA2Q14181 598 aa28.04■■■□□ 2.08
SSBP4-209ENST00000601357 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.04■■■□□ 2.08
SSBP4-209ENST00000601357 MVPQ14764 893 aaKnown RBP28.03■■■□□ 2.08
SSBP4-209ENST00000601357 FTSJ3Q8IY81 847 aaKnown RBP28.03■■■□□ 2.08
SSBP4-209ENST00000601357 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.03■■■□□ 2.08
SSBP4-209ENST00000601357 ZBTB7BO15156 539 aaPredicted RBP28.02■■■□□ 2.08
SSBP4-209ENST00000601357 CDC42EP5Q6NZY7 148 aa28.02■■■□□ 2.08
SSBP4-209ENST00000601357 SSH3Q8TE77 659 aa28.02■■■□□ 2.08
SSBP4-209ENST00000601357 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.02■■■□□ 2.08
SSBP4-209ENST00000601357 MYH2Q9UKX2 1941 aa28.02■■■□□ 2.08
SSBP4-209ENST00000601357 VGLL4Q14135 290 aa28.01■■■□□ 2.07
SSBP4-209ENST00000601357 IFNL1Q8IU54 200 aa28.01■■■□□ 2.07
SSBP4-209ENST00000601357 ZGPATQ8N5A5 531 aaKnown RBP28.01■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms