RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 FBXW7Q969H0 707 aa27.06■■□□□ 1.92
IRF3-228ENST00000601291 DSCC1Q9BVC3 393 aa27.06■■□□□ 1.92
IRF3-228ENST00000601291 FHDC1Q9C0D6 1143 aaPredicted RBP27.06■■□□□ 1.92
IRF3-228ENST00000601291 HSPA4P34932 840 aa27.05■■□□□ 1.92
IRF3-228ENST00000601291 GSTO1P78417 241 aa27.05■■□□□ 1.92
IRF3-228ENST00000601291 TTLL5Q6EMB2 1281 aa27.05■■□□□ 1.92
IRF3-228ENST00000601291 TAOK3Q9H2K8 898 aa27.05■■□□□ 1.92
IRF3-228ENST00000601291 RBM8AQ9Y5S9 174 aaKnown RBP27.05■■□□□ 1.92
IRF3-228ENST00000601291 ANAPC15P60006 121 aa27.04■■□□□ 1.92
IRF3-228ENST00000601291 U3KPZ7 1027 aaPredicted RBP27.04■■□□□ 1.92
IRF3-228ENST00000601291 CCDC88AQ3V6T2 1871 aa27.03■■□□□ 1.92
IRF3-228ENST00000601291 MBD4O95243 580 aa27.03■■□□□ 1.92
IRF3-228ENST00000601291 LARGE2Q8N3Y3 721 aa27.03■■□□□ 1.92
IRF3-228ENST00000601291 ZNF277Q9NRM2 450 aaPredicted RBP27.03■■□□□ 1.92
IRF3-228ENST00000601291 SUGT1Q9Y2Z0 365 aa27.03■■□□□ 1.92
IRF3-228ENST00000601291 HSPD1P10809 573 aaKnown RBP27.02■■□□□ 1.92
IRF3-228ENST00000601291 RNF20Q5VTR2 975 aa27.02■■□□□ 1.92
IRF3-228ENST00000601291 MAGEB6P1A0A0J9YX57 407 aa27.01■■□□□ 1.92
IRF3-228ENST00000601291 STRIP1Q5VSL9 837 aa27.01■■□□□ 1.92
IRF3-228ENST00000601291 FER1L6Q2WGJ9 1857 aa27.01■■□□□ 1.91
IRF3-228ENST00000601291 LDHCP07864 332 aa27.01■■□□□ 1.91
IRF3-228ENST00000601291 GNAT2P19087 354 aa27.01■■□□□ 1.91
IRF3-228ENST00000601291 IARSP41252 1262 aaKnown RBP27.01■■□□□ 1.91
IRF3-228ENST00000601291 VPS53Q5VIR6 699 aa27.01■■□□□ 1.91
IRF3-228ENST00000601291 ADGRA1Q86SQ6 560 aa27.01■■□□□ 1.91
IRF3-228ENST00000601291 MIGA1Q8NAN2 632 aa27.01■■□□□ 1.91
IRF3-228ENST00000601291 ZNF384Q8TF68 577 aa27.01■■□□□ 1.91
IRF3-228ENST00000601291 DDRGK1Q96HY6 314 aa27.01■■□□□ 1.91
IRF3-228ENST00000601291 STRBPQ96SI9 672 aaKnown RBP27.01■■□□□ 1.91
IRF3-228ENST00000601291 ARFGEF1Q9Y6D6 1849 aa27.01■■□□□ 1.91
IRF3-228ENST00000601291 ZKSCAN1P17029 563 aaPredicted RBP27■■□□□ 1.91
IRF3-228ENST00000601291 NECTIN1Q15223 517 aa27■■□□□ 1.91
IRF3-228ENST00000601291 SLF2Q8IX21 1173 aa27■■□□□ 1.91
IRF3-228ENST00000601291 ARMT1Q9H993 441 aa27■■□□□ 1.91
IRF3-228ENST00000601291 LTBP3Q9NS15 1303 aa26.99■■□□□ 1.91
IRF3-228ENST00000601291 CHD4Q14839 1912 aa26.99■■□□□ 1.91
IRF3-228ENST00000601291 USP17L3A6NCW0 530 aa26.99■■□□□ 1.91
IRF3-228ENST00000601291 USP17L4A6NCW7 530 aa26.99■■□□□ 1.91
IRF3-228ENST00000601291 FKBP1AP62942 108 aaKnown RBP26.99■■□□□ 1.91
IRF3-228ENST00000601291 USP17L1Q7RTZ2 530 aa26.99■■□□□ 1.91
IRF3-228ENST00000601291 KIF2CQ99661 725 aa26.99■■□□□ 1.91
IRF3-228ENST00000601291 PALD1Q9ULE6 856 aa26.99■■□□□ 1.91
IRF3-228ENST00000601291 GRIK5Q16478 980 aa26.98■■□□□ 1.91
IRF3-228ENST00000601291 CREB3L3Q68CJ9 461 aa26.98■■□□□ 1.91
IRF3-228ENST00000601291 NIM1KQ8IY84 436 aa26.98■■□□□ 1.91
IRF3-228ENST00000601291 LCORLQ8N3X6 602 aa26.98■■□□□ 1.91
IRF3-228ENST00000601291 CTNNA3Q9UI47 895 aa26.98■■□□□ 1.91
IRF3-228ENST00000601291 NFKBIEO00221 500 aa26.97■■□□□ 1.91
IRF3-228ENST00000601291 RABEP1Q15276 862 aa26.97■■□□□ 1.91
IRF3-228ENST00000601291 IL17RAQ96F46 866 aa26.97■■□□□ 1.91
IRF3-228ENST00000601291 NOL10Q9BSC4 688 aaKnown RBP26.97■■□□□ 1.91
IRF3-228ENST00000601291 SYT17Q9BSW7 474 aa26.97■■□□□ 1.91
IRF3-228ENST00000601291 KCNB2Q92953 911 aa26.97■■□□□ 1.91
IRF3-228ENST00000601291 RIOK1Q9BRS2 568 aaKnown RBP26.97■■□□□ 1.91
IRF3-228ENST00000601291 SLC27A2O14975 620 aa26.96■■□□□ 1.91
IRF3-228ENST00000601291 APPP05067 770 aa26.96■■□□□ 1.91
IRF3-228ENST00000601291 DACT2Q5SW24 774 aa26.96■■□□□ 1.91
IRF3-228ENST00000601291 CERS5Q8N5B7 392 aa26.96■■□□□ 1.91
IRF3-228ENST00000601291 SNX14Q9Y5W7 946 aa26.96■■□□□ 1.91
IRF3-228ENST00000601291 RPAP1Q9BWH6 1393 aaPredicted RBP26.96■■□□□ 1.91
IRF3-228ENST00000601291 MROH7-TTC4A0A0A0MT08 1334 aa26.95■■□□□ 1.91
IRF3-228ENST00000601291 DIXDC1Q155Q3 683 aa26.95■■□□□ 1.9
IRF3-228ENST00000601291 CERS3Q8IU89 383 aa26.95■■□□□ 1.9
IRF3-228ENST00000601291 KCNQ5Q9NR82 932 aa26.95■■□□□ 1.9
IRF3-228ENST00000601291 SLC4A4Q9Y6R1 1079 aa26.95■■□□□ 1.9
IRF3-228ENST00000601291 YDJCA8MPS7 323 aa26.94■■□□□ 1.9
IRF3-228ENST00000601291 PATL2C9JE40 543 aaKnown RBP26.94■■□□□ 1.9
IRF3-228ENST00000601291 FOXP2O15409 715 aa26.94■■□□□ 1.9
IRF3-228ENST00000601291 BAG3O95817 575 aa26.94■■□□□ 1.9
IRF3-228ENST00000601291 JDP2Q8WYK2 163 aa26.94■■□□□ 1.9
IRF3-228ENST00000601291 NACAP1Q9BZK3 213 aa26.94■■□□□ 1.9
IRF3-228ENST00000601291 AATFQ9NY61 560 aaKnown RBP eCLIP26.94■■□□□ 1.9
IRF3-228ENST00000601291 ZNRF3Q9ULT6 936 aa26.94■■□□□ 1.9
IRF3-228ENST00000601291 TTF2Q9UNY4 1162 aaKnown RBP26.93■■□□□ 1.9
IRF3-228ENST00000601291 ZMYM6O95789 1325 aa26.93■■□□□ 1.9
IRF3-228ENST00000601291 DYNLL1P63167 89 aaKnown RBP26.92■■□□□ 1.9
IRF3-228ENST00000601291 RASEFQ8IZ41 740 aa26.92■■□□□ 1.9
IRF3-228ENST00000601291 FAM163AQ96GL9 167 aaPredicted RBP26.92■■□□□ 1.9
IRF3-228ENST00000601291 MXD3Q9BW11 206 aa26.92■■□□□ 1.9
IRF3-228ENST00000601291 CRNKL1Q9BZJ0 848 aaKnown RBP26.92■■□□□ 1.9
IRF3-228ENST00000601291 SCN9AQ15858 1988 aa26.92■■□□□ 1.9
IRF3-228ENST00000601291 COL4A5P29400 1685 aa26.92■■□□□ 1.9
IRF3-228ENST00000601291 MYO3BQ8WXR4 1341 aa26.92■■□□□ 1.9
IRF3-228ENST00000601291 F8W031 263 aaPredicted RBP26.92■■□□□ 1.9
IRF3-228ENST00000601291 FGAP02671 866 aa26.92■■□□□ 1.9
IRF3-228ENST00000601291 KRT32Q14532 448 aa26.92■■□□□ 1.9
IRF3-228ENST00000601291 IMMTQ16891 758 aaKnown RBP26.92■■□□□ 1.9
IRF3-228ENST00000601291 ZNF646O15015 1829 aaPredicted RBP26.91■■□□□ 1.9
IRF3-228ENST00000601291 ALX1Q15699 326 aa26.91■■□□□ 1.9
IRF3-228ENST00000601291 IFNL3Q8IZI9 196 aa26.91■■□□□ 1.9
IRF3-228ENST00000601291 IL27Q8NEV9 243 aa26.91■■□□□ 1.9
IRF3-228ENST00000601291 NAPBQ9H115 298 aa26.91■■□□□ 1.9
IRF3-228ENST00000601291 GAKO14976 1311 aa26.91■■□□□ 1.9
IRF3-228ENST00000601291 PSME4Q14997 1843 aa26.9■■□□□ 1.9
IRF3-228ENST00000601291 GSG1L2A8MUP6 293 aa26.9■■□□□ 1.9
IRF3-228ENST00000601291 SOCS7O14512 581 aa26.9■■□□□ 1.9
IRF3-228ENST00000601291 CYP21A2P08686 494 aa26.9■■□□□ 1.9
IRF3-228ENST00000601291 RASSF7Q02833 373 aa26.9■■□□□ 1.9
IRF3-228ENST00000601291 BECN1Q14457 450 aa26.9■■□□□ 1.9
IRF3-228ENST00000601291 TSGA10IPQ3SY00 556 aa26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms