RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 FGFR2P21802 821 aa22.63■■□□□ 1.21
CHMP2A-208ENST00000601220 IREB2P48200 963 aaKnown RBP22.63■■□□□ 1.21
CHMP2A-208ENST00000601220 RFX5P48382 616 aaPredicted RBP22.63■■□□□ 1.21
CHMP2A-208ENST00000601220 TRMT2AQ8IZ69 625 aaKnown RBP22.63■■□□□ 1.21
CHMP2A-208ENST00000601220 BCAMP50895 628 aa22.62■■□□□ 1.21
CHMP2A-208ENST00000601220 HDLBPQ00341 1268 aaKnown RBP22.62■■□□□ 1.21
CHMP2A-208ENST00000601220 TNFAIP1Q13829 316 aa22.62■■□□□ 1.21
CHMP2A-208ENST00000601220 ANKRD13AQ8IZ07 590 aa22.62■■□□□ 1.21
CHMP2A-208ENST00000601220 CDCA7LQ96GN5 454 aa22.62■■□□□ 1.21
CHMP2A-208ENST00000601220 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.62■■□□□ 1.21
CHMP2A-208ENST00000601220 TESPA1A2RU30 521 aaPredicted RBP22.61■■□□□ 1.21
CHMP2A-208ENST00000601220 ALDH1L2Q3SY69 923 aa22.61■■□□□ 1.21
CHMP2A-208ENST00000601220 FBXO46Q6PJ61 603 aaPredicted RBP22.61■■□□□ 1.21
CHMP2A-208ENST00000601220 PTPN18Q99952 460 aa22.61■■□□□ 1.21
CHMP2A-208ENST00000601220 MRIQ9BWK5 157 aa22.61■■□□□ 1.21
CHMP2A-208ENST00000601220 TMEM39BQ9GZU3 492 aa22.61■■□□□ 1.21
CHMP2A-208ENST00000601220 TNRC18O15417 2968 aaPredicted RBP22.61■■□□□ 1.21
CHMP2A-208ENST00000601220 TCP10L2B9ZVM9 353 aa22.6■■□□□ 1.21
CHMP2A-208ENST00000601220 CHAF1AQ13111 956 aaPredicted RBP22.6■■□□□ 1.21
CHMP2A-208ENST00000601220 CAVIN4Q5BKX8 364 aa22.6■■□□□ 1.21
CHMP2A-208ENST00000601220 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.6■■□□□ 1.21
CHMP2A-208ENST00000601220 VPS37DQ86XT2 251 aa22.6■■□□□ 1.21
CHMP2A-208ENST00000601220 TBC1D22AQ8WUA7 517 aa22.6■■□□□ 1.21
CHMP2A-208ENST00000601220 KIF16BQ96L93 1317 aa22.59■■□□□ 1.21
CHMP2A-208ENST00000601220 MS4A4AQ96JQ5 239 aa22.58■■□□□ 1.21
CHMP2A-208ENST00000601220 LAMB1P07942 1786 aa22.58■■□□□ 1.2
CHMP2A-208ENST00000601220 ARAP2Q8WZ64 1704 aa22.57■■□□□ 1.2
CHMP2A-208ENST00000601220 EYA2O00167 538 aa22.57■■□□□ 1.2
CHMP2A-208ENST00000601220 SLC34A2O95436 690 aa22.57■■□□□ 1.2
CHMP2A-208ENST00000601220 PUM3Q15397 648 aaKnown RBP22.57■■□□□ 1.2
CHMP2A-208ENST00000601220 APOBEC3HQ6NTF7 200 aaKnown RBP22.57■■□□□ 1.2
CHMP2A-208ENST00000601220 ATG9AQ7Z3C6 839 aa22.57■■□□□ 1.2
CHMP2A-208ENST00000601220 OPTNQ96CV9 577 aa22.57■■□□□ 1.2
CHMP2A-208ENST00000601220 ZDHHC15Q96MV8 337 aa22.57■■□□□ 1.2
CHMP2A-208ENST00000601220 ELP3Q9H9T3 547 aa22.57■■□□□ 1.2
CHMP2A-208ENST00000601220 MAP3K9P80192 1104 aa22.56■■□□□ 1.2
CHMP2A-208ENST00000601220 CRHR2Q13324 411 aa22.56■■□□□ 1.2
CHMP2A-208ENST00000601220 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.56■■□□□ 1.2
CHMP2A-208ENST00000601220 CNKSR2Q8WXI2 1034 aa22.56■■□□□ 1.2
CHMP2A-208ENST00000601220 TEKT1Q969V4 418 aa22.56■■□□□ 1.2
CHMP2A-208ENST00000601220 IFIT1P09914 478 aaKnown RBP22.55■■□□□ 1.2
CHMP2A-208ENST00000601220 CACNB3P54284 484 aa22.55■■□□□ 1.2
CHMP2A-208ENST00000601220 VGLL4Q14135 290 aa22.55■■□□□ 1.2
CHMP2A-208ENST00000601220 SUGT1Q9Y2Z0 365 aa22.55■■□□□ 1.2
CHMP2A-208ENST00000601220 FRAT2O75474 233 aaPredicted RBP22.54■■□□□ 1.2
CHMP2A-208ENST00000601220 TNNI2P48788 182 aa22.54■■□□□ 1.2
CHMP2A-208ENST00000601220 CAP1Q01518 475 aa22.54■■□□□ 1.2
CHMP2A-208ENST00000601220 OTOP1Q7RTM1 612 aa22.54■■□□□ 1.2
CHMP2A-208ENST00000601220 LPIN2Q92539 896 aa22.54■■□□□ 1.2
CHMP2A-208ENST00000601220 SMC4Q9NTJ3 1288 aa22.54■■□□□ 1.2
CHMP2A-208ENST00000601220 FKBP1CQ5VVH2 108 aa22.53■■□□□ 1.2
CHMP2A-208ENST00000601220 OTUD7BQ6GQQ9 843 aa22.53■■□□□ 1.2
CHMP2A-208ENST00000601220 HHIPL2Q6UWX4 724 aa22.53■■□□□ 1.2
CHMP2A-208ENST00000601220 BRI3BPQ8WY22 251 aa22.53■■□□□ 1.2
CHMP2A-208ENST00000601220 FAM83AQ86UY5 434 aa22.52■■□□□ 1.2
CHMP2A-208ENST00000601220 NOB1Q9ULX3 412 aaKnown RBP22.52■■□□□ 1.2
CHMP2A-208ENST00000601220 TRIM17Q9Y577 477 aa22.52■■□□□ 1.2
CHMP2A-208ENST00000601220 OTOFQ9HC10 1997 aa22.52■■□□□ 1.2
CHMP2A-208ENST00000601220 CIAO1O76071 339 aa22.5■■□□□ 1.19
CHMP2A-208ENST00000601220 CT47B1P0C2W7 299 aaPredicted RBP22.5■■□□□ 1.19
CHMP2A-208ENST00000601220 SLC5A1P13866 664 aa22.5■■□□□ 1.19
CHMP2A-208ENST00000601220 CD99L2Q8TCZ2 262 aa22.5■■□□□ 1.19
CHMP2A-208ENST00000601220 FBXO3Q9UK99 471 aa22.5■■□□□ 1.19
CHMP2A-208ENST00000601220 SNCAIPQ9Y6H5 919 aa22.5■■□□□ 1.19
CHMP2A-208ENST00000601220 MAST3O60307 1309 aa22.5■■□□□ 1.19
CHMP2A-208ENST00000601220 WDR66Q8TBY9 1149 aa22.49■■□□□ 1.19
CHMP2A-208ENST00000601220 ERO1AQ96HE7 468 aa22.49■■□□□ 1.19
CHMP2A-208ENST00000601220 PTPN22Q9Y2R2 807 aa22.49■■□□□ 1.19
CHMP2A-208ENST00000601220 HTTP42858 3142 aa22.48■■□□□ 1.19
CHMP2A-208ENST00000601220 CCL15-CCL14A0A0B4J2E2 113 aa22.48■■□□□ 1.19
CHMP2A-208ENST00000601220 SPDYE5A6NIY4 337 aa22.48■■□□□ 1.19
CHMP2A-208ENST00000601220 UBTFL1P0CB47 393 aaPredicted RBP22.48■■□□□ 1.19
CHMP2A-208ENST00000601220 GTF2A2P52657 109 aa22.48■■□□□ 1.19
CHMP2A-208ENST00000601220 SP3Q02447 781 aa22.48■■□□□ 1.19
CHMP2A-208ENST00000601220 CCL15Q16663 113 aa22.48■■□□□ 1.19
CHMP2A-208ENST00000601220 FAM43AQ8N2R8 423 aa22.48■■□□□ 1.19
CHMP2A-208ENST00000601220 CSADQ9Y600 493 aa22.48■■□□□ 1.19
CHMP2A-208ENST00000601220 OTUD5Q96G74 571 aa22.47■■□□□ 1.19
CHMP2A-208ENST00000601220 SIL1Q9H173 461 aa22.47■■□□□ 1.19
CHMP2A-208ENST00000601220 RPAP1Q9BWH6 1393 aaPredicted RBP22.47■■□□□ 1.19
CHMP2A-208ENST00000601220 PDE4DIPQ5VU43 2346 aa22.46■■□□□ 1.19
CHMP2A-208ENST00000601220 ZBTB22O15209 634 aa22.46■■□□□ 1.19
CHMP2A-208ENST00000601220 ZKSCAN4Q969J2 545 aaPredicted RBP22.46■■□□□ 1.19
CHMP2A-208ENST00000601220 TMOD2Q9NZR1 351 aa22.46■■□□□ 1.19
CHMP2A-208ENST00000601220 CEP126Q9P2H0 1117 aa22.46■■□□□ 1.19
CHMP2A-208ENST00000601220 DAGLAQ9Y4D2 1042 aa22.46■■□□□ 1.19
CHMP2A-208ENST00000601220 LRRFIP2Q9Y608 721 aaKnown RBP22.46■■□□□ 1.19
CHMP2A-208ENST00000601220 PRDX5P30044 214 aa22.45■■□□□ 1.18
CHMP2A-208ENST00000601220 DIXDC1Q155Q3 683 aa22.45■■□□□ 1.18
CHMP2A-208ENST00000601220 ATP2B3Q16720 1220 aa22.45■■□□□ 1.18
CHMP2A-208ENST00000601220 ERO1BQ86YB8 467 aa22.45■■□□□ 1.18
CHMP2A-208ENST00000601220 FAM151AQ8WW52 585 aa22.45■■□□□ 1.18
CHMP2A-208ENST00000601220 WRNIP1Q96S55 665 aa22.45■■□□□ 1.18
CHMP2A-208ENST00000601220 API5Q9BZZ5 524 aaKnown RBP22.45■■□□□ 1.18
CHMP2A-208ENST00000601220 EFCC1Q9HA90 598 aa22.45■■□□□ 1.18
CHMP2A-208ENST00000601220 COPRSQ9NQ92 184 aa22.45■■□□□ 1.18
CHMP2A-208ENST00000601220 PA2G4Q9UQ80 394 aaKnown RBP22.45■■□□□ 1.18
CHMP2A-208ENST00000601220 IL15P40933 162 aaPredicted RBP22.44■■□□□ 1.18
CHMP2A-208ENST00000601220 RARSP54136 660 aaKnown RBP22.44■■□□□ 1.18
CHMP2A-208ENST00000601220 CDC42EP5Q6NZY7 148 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms