RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 APBB1O00213 710 aa14.26□□□□□ -0.13
CHMP2A-207ENST00000600804 SMARCA5O60264 1052 aaPredicted RBP14.26□□□□□ -0.13
CHMP2A-207ENST00000600804 SLC10A3P09131 477 aa14.26□□□□□ -0.13
CHMP2A-207ENST00000600804 VIL1P09327 827 aaKnown RBP14.26□□□□□ -0.13
CHMP2A-207ENST00000600804 IFIT2P09913 472 aaKnown RBP14.26□□□□□ -0.13
CHMP2A-207ENST00000600804 RPS12P25398 132 aaKnown RBP14.26□□□□□ -0.13
CHMP2A-207ENST00000600804 TIMM10P62072 90 aa14.26□□□□□ -0.13
CHMP2A-207ENST00000600804 KIF4BQ2VIQ3 1234 aa14.26□□□□□ -0.13
CHMP2A-207ENST00000600804 FAM84BQ96KN1 310 aaPredicted RBP14.26□□□□□ -0.13
CHMP2A-207ENST00000600804 DBNLQ9UJU6 430 aaKnown RBP14.26□□□□□ -0.13
CHMP2A-207ENST00000600804 TTC41PQ6P2S7 1318 aa14.25□□□□□ -0.13
CHMP2A-207ENST00000600804 WTIPA6NIX2 430 aaPredicted RBP14.25□□□□□ -0.13
CHMP2A-207ENST00000600804 SNAP23O00161 211 aa14.25□□□□□ -0.13
CHMP2A-207ENST00000600804 TRPA1O75762 1119 aa14.25□□□□□ -0.13
CHMP2A-207ENST00000600804 CAVIN4Q5BKX8 364 aa14.25□□□□□ -0.13
CHMP2A-207ENST00000600804 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.25□□□□□ -0.13
CHMP2A-207ENST00000600804 CDCA5Q96FF9 252 aa14.25□□□□□ -0.13
CHMP2A-207ENST00000600804 CSRNP1Q96S65 589 aa14.25□□□□□ -0.13
CHMP2A-207ENST00000600804 ZC3H12CQ9C0D7 883 aaKnown RBP14.25□□□□□ -0.13
CHMP2A-207ENST00000600804 LNPKQ9C0E8 428 aa14.25□□□□□ -0.13
CHMP2A-207ENST00000600804 OSBPL3Q9H4L5 887 aa14.25□□□□□ -0.13
CHMP2A-207ENST00000600804 SAGE1Q9NXZ1 904 aa14.25□□□□□ -0.13
CHMP2A-207ENST00000600804 STAP2Q9UGK3 403 aa14.25□□□□□ -0.13
CHMP2A-207ENST00000600804 AOX1Q06278 1338 aa14.24□□□□□ -0.13
CHMP2A-207ENST00000600804 PDS5AQ29RF7 1337 aaKnown RBP14.24□□□□□ -0.13
CHMP2A-207ENST00000600804 SEMA3EO15041 775 aa14.24□□□□□ -0.13
CHMP2A-207ENST00000600804 IL1R1P14778 569 aa14.24□□□□□ -0.13
CHMP2A-207ENST00000600804 ZNF157P51786 506 aaPredicted RBP14.24□□□□□ -0.13
CHMP2A-207ENST00000600804 SOX10P56693 466 aa14.24□□□□□ -0.13
CHMP2A-207ENST00000600804 ZNF804AQ7Z570 1209 aa14.24□□□□□ -0.13
CHMP2A-207ENST00000600804 TXNRD3Q86VQ6 643 aa14.24□□□□□ -0.13
CHMP2A-207ENST00000600804 RASAL3Q86YV0 1011 aa14.24□□□□□ -0.13
CHMP2A-207ENST00000600804 C2orf69Q8N8R5 385 aa14.24□□□□□ -0.13
CHMP2A-207ENST00000600804 DCPSQ96C86 337 aaKnown RBP14.24□□□□□ -0.13
CHMP2A-207ENST00000600804 NEUROD6Q96NK8 337 aa14.24□□□□□ -0.13
CHMP2A-207ENST00000600804 DBNDD2Q9BQY9 259 aa14.24□□□□□ -0.13
CHMP2A-207ENST00000600804 COA1Q9GZY4 146 aa14.24□□□□□ -0.13
CHMP2A-207ENST00000600804 CCDC8Q9H0W5 538 aaPredicted RBP14.24□□□□□ -0.13
CHMP2A-207ENST00000600804 SCAF8Q9UPN6 1271 aaKnown RBP14.24□□□□□ -0.13
CHMP2A-207ENST00000600804 MYH13Q9UKX3 1938 aa14.23□□□□□ -0.13
CHMP2A-207ENST00000600804 UQCRFS1P1P0C7P4 283 aa14.23□□□□□ -0.13
CHMP2A-207ENST00000600804 KLRK1P26718 216 aa14.23□□□□□ -0.13
CHMP2A-207ENST00000600804 ARID4AP29374 1257 aaPredicted RBP14.23□□□□□ -0.13
CHMP2A-207ENST00000600804 ADORA1P30542 326 aa14.23□□□□□ -0.13
CHMP2A-207ENST00000600804 HIBADHP31937 336 aaKnown RBP14.23□□□□□ -0.13
CHMP2A-207ENST00000600804 ZNF280AP59817 542 aaPredicted RBP14.23□□□□□ -0.13
CHMP2A-207ENST00000600804 CCDC158Q5M9N0 1113 aa14.23□□□□□ -0.13
CHMP2A-207ENST00000600804 CCDC102BQ68D86 513 aa14.23□□□□□ -0.13
CHMP2A-207ENST00000600804 MOB2Q70IA6 237 aa14.23□□□□□ -0.13
CHMP2A-207ENST00000600804 PODNQ7Z5L7 613 aa14.23□□□□□ -0.13
CHMP2A-207ENST00000600804 TDRD7Q8NHU6 1098 aaKnown RBP14.23□□□□□ -0.13
CHMP2A-207ENST00000600804 GPATCH3Q96I76 525 aa14.23□□□□□ -0.13
CHMP2A-207ENST00000600804 GMLQ99445 158 aa14.23□□□□□ -0.13
CHMP2A-207ENST00000600804 GNL3LQ9NVN8 582 aaKnown RBP14.23□□□□□ -0.13
CHMP2A-207ENST00000600804 ATP5JP18859 108 aa14.22□□□□□ -0.13
CHMP2A-207ENST00000600804 MX1P20591 662 aa14.22□□□□□ -0.13
CHMP2A-207ENST00000600804 PDE4AP27815 886 aa14.22□□□□□ -0.13
CHMP2A-207ENST00000600804 PDE1AP54750 535 aa14.22□□□□□ -0.13
CHMP2A-207ENST00000600804 ANGEL2Q5VTE6 544 aaKnown RBP14.22□□□□□ -0.13
CHMP2A-207ENST00000600804 PLEKHM2Q8IWE5 1019 aa14.22□□□□□ -0.13
CHMP2A-207ENST00000600804 CCDC102AQ96A19 550 aa14.22□□□□□ -0.13
CHMP2A-207ENST00000600804 ECHDC1Q9NTX5 307 aa14.22□□□□□ -0.13
CHMP2A-207ENST00000600804 TLR7Q9NYK1 1049 aaKnown RBP14.22□□□□□ -0.13
CHMP2A-207ENST00000600804 ERC2O15083 957 aa14.21□□□□□ -0.13
CHMP2A-207ENST00000600804 IGSF3O75054 1194 aa14.21□□□□□ -0.13
CHMP2A-207ENST00000600804 PHKA1P46020 1223 aa14.21□□□□□ -0.13
CHMP2A-207ENST00000600804 GYG1P46976 350 aa14.21□□□□□ -0.13
CHMP2A-207ENST00000600804 BCAMP50895 628 aa14.21□□□□□ -0.13
CHMP2A-207ENST00000600804 SCARF1Q14162 830 aa14.21□□□□□ -0.13
CHMP2A-207ENST00000600804 GORABQ5T7V8 394 aa14.21□□□□□ -0.13
CHMP2A-207ENST00000600804 RSBN1LQ6PCB5 846 aaPredicted RBP14.21□□□□□ -0.13
CHMP2A-207ENST00000600804 VPS37DQ86XT2 251 aa14.21□□□□□ -0.13
CHMP2A-207ENST00000600804 CD209Q9NNX6 404 aa14.21□□□□□ -0.13
CHMP2A-207ENST00000600804 OTOFQ9HC10 1997 aa14.21□□□□□ -0.13
CHMP2A-207ENST00000600804 RBBP6Q7Z6E9 1792 aaKnown RBP14.2□□□□□ -0.14
CHMP2A-207ENST00000600804 GLRX3O76003 335 aaKnown RBP14.2□□□□□ -0.14
CHMP2A-207ENST00000600804 SULF1Q8IWU6 871 aa14.2□□□□□ -0.14
CHMP2A-207ENST00000600804 PI4K2BQ8TCG2 481 aa14.2□□□□□ -0.14
CHMP2A-207ENST00000600804 OTUD7AQ8TE49 926 aaPredicted RBP14.2□□□□□ -0.14
CHMP2A-207ENST00000600804 MXD3Q9BW11 206 aa14.2□□□□□ -0.14
CHMP2A-207ENST00000600804 DENND2AQ9ULE3 1009 aa14.2□□□□□ -0.14
CHMP2A-207ENST00000600804 FAM205AQ6ZU69 1335 aa14.19□□□□□ -0.14
CHMP2A-207ENST00000600804 FKBP1AP62942 108 aaKnown RBP14.19□□□□□ -0.14
CHMP2A-207ENST00000600804 TTC39AQ5SRH9 613 aa14.19□□□□□ -0.14
CHMP2A-207ENST00000600804 PRAMEF18Q5VWM3 479 aa14.19□□□□□ -0.14
CHMP2A-207ENST00000600804 TICAM2Q86XR7 235 aa14.19□□□□□ -0.14
CHMP2A-207ENST00000600804 AGBL3Q8NEM8 1001 aa14.19□□□□□ -0.14
CHMP2A-207ENST00000600804 MYOZ2Q9NPC6 264 aa14.19□□□□□ -0.14
CHMP2A-207ENST00000600804 SALL1Q9NSC2 1324 aa14.18□□□□□ -0.14
CHMP2A-207ENST00000600804 RASGRF1Q13972 1273 aa14.18□□□□□ -0.14
CHMP2A-207ENST00000600804 NBPF9Q3BBW0 867 aa14.18□□□□□ -0.14
CHMP2A-207ENST00000600804 HAUS7Q99871 368 aa14.18□□□□□ -0.14
CHMP2A-207ENST00000600804 PITPNM2Q9BZ72 1349 aa14.17□□□□□ -0.14
CHMP2A-207ENST00000600804 MCAMP43121 646 aa14.17□□□□□ -0.14
CHMP2A-207ENST00000600804 STRIP1Q5VSL9 837 aa14.17□□□□□ -0.14
CHMP2A-207ENST00000600804 TMED8Q6PL24 325 aaPredicted RBP14.17□□□□□ -0.14
CHMP2A-207ENST00000600804 CTU1Q7Z7A3 348 aaKnown RBP14.17□□□□□ -0.14
CHMP2A-207ENST00000600804 SPATA5Q8NB90 893 aa14.17□□□□□ -0.14
CHMP2A-207ENST00000600804 SUGT1Q9Y2Z0 365 aa14.17□□□□□ -0.14
CHMP2A-207ENST00000600804 G3V3G9 751 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms