RNA–Protein interactions for RNA: ENST00000600646.5

FKRP-220, Transcript of fukutin related protein, humanhuman

TSL 3

Gene FKRP, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FKRP-220ENST00000600646 BCL11AQ9H165 835 aa9.42□□□□□ -0.9
FKRP-220ENST00000600646 RWDD1Q9H446 243 aaPredicted RBP9.42□□□□□ -0.9
FKRP-220ENST00000600646 GGA3Q9NZ52 723 aa9.42□□□□□ -0.9
FKRP-220ENST00000600646 SHTN1A0MZ66 631 aa9.41□□□□□ -0.9
FKRP-220ENST00000600646 ITGBL1O95965 494 aaPredicted RBP9.41□□□□□ -0.9
FKRP-220ENST00000600646 LDHCP07864 332 aa9.41□□□□□ -0.9
FKRP-220ENST00000600646 ARID4AP29374 1257 aaPredicted RBP9.41□□□□□ -0.9
FKRP-220ENST00000600646 CRKP46108 304 aa9.41□□□□□ -0.9
FKRP-220ENST00000600646 USP48Q86UV5 1035 aa9.41□□□□□ -0.9
FKRP-220ENST00000600646 SIRT2Q8IXJ6 389 aa9.41□□□□□ -0.9
FKRP-220ENST00000600646 CERS5Q8N5B7 392 aa9.41□□□□□ -0.9
FKRP-220ENST00000600646 GCC1Q96CN9 775 aa9.41□□□□□ -0.9
FKRP-220ENST00000600646 CCDC8Q9H0W5 538 aaPredicted RBP9.41□□□□□ -0.9
FKRP-220ENST00000600646 IL1RAPL2Q9NP60 686 aa9.41□□□□□ -0.9
FKRP-220ENST00000600646 CREBZFQ9NS37 354 aa9.41□□□□□ -0.9
FKRP-220ENST00000600646 LRP2BPQ9P2M1 347 aa9.41□□□□□ -0.9
FKRP-220ENST00000600646 PPP2R3BQ9Y5P8 575 aa9.41□□□□□ -0.9
FKRP-220ENST00000600646 ADAMTSL1Q8N6G6 1762 aa9.41□□□□□ -0.9
FKRP-220ENST00000600646 PASKQ96RG2 1323 aa9.4□□□□□ -0.9
FKRP-220ENST00000600646 SPDYE2BA6NHP3 402 aa9.4□□□□□ -0.9
FKRP-220ENST00000600646 CENPBP07199 599 aaPredicted RBP9.4□□□□□ -0.9
FKRP-220ENST00000600646 SPDYE6P0CI01 402 aa9.4□□□□□ -0.9
FKRP-220ENST00000600646 RASGRF1Q13972 1273 aa9.4□□□□□ -0.9
FKRP-220ENST00000600646 TTF1Q15361 905 aaPredicted RBP9.4□□□□□ -0.9
FKRP-220ENST00000600646 NBPF9Q3BBW0 867 aa9.4□□□□□ -0.9
FKRP-220ENST00000600646 TMED8Q6PL24 325 aaPredicted RBP9.4□□□□□ -0.9
FKRP-220ENST00000600646 HHIPL2Q6UWX4 724 aa9.4□□□□□ -0.9
FKRP-220ENST00000600646 C2orf69Q8N8R5 385 aa9.4□□□□□ -0.9
FKRP-220ENST00000600646 EAF2Q96CJ1 260 aaPredicted RBP9.4□□□□□ -0.9
FKRP-220ENST00000600646 HOOK2Q96ED9 719 aa9.4□□□□□ -0.9
FKRP-220ENST00000600646 DBNDD2Q9BQY9 259 aa9.4□□□□□ -0.9
FKRP-220ENST00000600646 GLIS2Q9BZE0 524 aaPredicted RBP9.4□□□□□ -0.9
FKRP-220ENST00000600646 DCTPP1Q9H773 170 aa9.4□□□□□ -0.9
FKRP-220ENST00000600646 ZNF408Q9H9D4 720 aa9.4□□□□□ -0.9
FKRP-220ENST00000600646 VEZTQ9HBM0 779 aa9.4□□□□□ -0.9
FKRP-220ENST00000600646 RAI14Q9P0K7 980 aa9.4□□□□□ -0.9
FKRP-220ENST00000600646 ABT1Q9ULW3 272 aaKnown RBP9.4□□□□□ -0.9
FKRP-220ENST00000600646 CELF2O95319 508 aaKnown RBP9.39□□□□□ -0.91
FKRP-220ENST00000600646 EGFRP00533 1210 aa9.39□□□□□ -0.91
FKRP-220ENST00000600646 C1QBPQ07021 282 aaKnown RBP9.39□□□□□ -0.91
FKRP-220ENST00000600646 SUPT20HL1Q3ZLR7 823 aa9.39□□□□□ -0.91
FKRP-220ENST00000600646 CERS3Q8IU89 383 aa9.39□□□□□ -0.91
FKRP-220ENST00000600646 PRMT6Q96LA8 375 aaPredicted RBP9.39□□□□□ -0.91
FKRP-220ENST00000600646 ZDHHC15Q96MV8 337 aa9.39□□□□□ -0.91
FKRP-220ENST00000600646 HMG20BQ9P0W2 317 aa9.39□□□□□ -0.91
FKRP-220ENST00000600646 DBNLQ9UJU6 430 aaKnown RBP9.39□□□□□ -0.91
FKRP-220ENST00000600646 COL1A1P02452 1464 aaPredicted RBP9.39□□□□□ -0.91
FKRP-220ENST00000600646 BAG3O95817 575 aa9.38□□□□□ -0.91
FKRP-220ENST00000600646 MAP4K4O95819 1239 aaPredicted RBP9.38□□□□□ -0.91
FKRP-220ENST00000600646 NEFLP07196 543 aa9.38□□□□□ -0.91
FKRP-220ENST00000600646 PRDX5P30044 214 aa9.38□□□□□ -0.91
FKRP-220ENST00000600646 ECE1P42892 770 aa9.38□□□□□ -0.91
FKRP-220ENST00000600646 MCAMP43121 646 aa9.38□□□□□ -0.91
FKRP-220ENST00000600646 FKBP1BP68106 108 aa9.38□□□□□ -0.91
FKRP-220ENST00000600646 MAP3K12Q12852 859 aa9.38□□□□□ -0.91
FKRP-220ENST00000600646 HDAC1Q13547 482 aaPredicted RBP9.38□□□□□ -0.91
FKRP-220ENST00000600646 TTLL12Q14166 644 aaPredicted RBP9.38□□□□□ -0.91
FKRP-220ENST00000600646 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.38□□□□□ -0.91
FKRP-220ENST00000600646 PCDHB15Q9Y5E8 787 aa9.38□□□□□ -0.91
FKRP-220ENST00000600646 ZNF646O15015 1829 aaPredicted RBP9.38□□□□□ -0.91
FKRP-220ENST00000600646 CLRN2A0PK11 232 aa9.37□□□□□ -0.91
FKRP-220ENST00000600646 ADM5C9JUS6 153 aa9.37□□□□□ -0.91
FKRP-220ENST00000600646 TRAF5O00463 557 aa9.37□□□□□ -0.91
FKRP-220ENST00000600646 ERC2O15083 957 aa9.37□□□□□ -0.91
FKRP-220ENST00000600646 PPP1R12BO60237 982 aaPredicted RBP9.37□□□□□ -0.91
FKRP-220ENST00000600646 PLCG2P16885 1265 aa9.37□□□□□ -0.91
FKRP-220ENST00000600646 DEFB115Q30KQ5 88 aa9.37□□□□□ -0.91
FKRP-220ENST00000600646 LRRFIP1Q32MZ4 808 aaKnown RBP9.37□□□□□ -0.91
FKRP-220ENST00000600646 SPDYE2Q495Y8 402 aa9.37□□□□□ -0.91
FKRP-220ENST00000600646 FKBP1CQ5VVH2 108 aa9.37□□□□□ -0.91
FKRP-220ENST00000600646 NAA16Q6N069 864 aaPredicted RBP9.37□□□□□ -0.91
FKRP-220ENST00000600646 PAXIP1Q6ZW49 1069 aaPredicted RBP9.37□□□□□ -0.91
FKRP-220ENST00000600646 ARMC9Q7Z3E5 817 aa9.37□□□□□ -0.91
FKRP-220ENST00000600646 EXOC6Q8TAG9 804 aa9.37□□□□□ -0.91
FKRP-220ENST00000600646 CDCA5Q96FF9 252 aa9.37□□□□□ -0.91
FKRP-220ENST00000600646 ZBED3Q96IU2 234 aaPredicted RBP9.37□□□□□ -0.91
FKRP-220ENST00000600646 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.37□□□□□ -0.91
FKRP-220ENST00000600646 DEFB129Q9H1M3 183 aa9.37□□□□□ -0.91
FKRP-220ENST00000600646 TDRD3Q9H7E2 651 aaKnown RBP9.37□□□□□ -0.91
FKRP-220ENST00000600646 GBA2Q9HCG7 927 aaPredicted RBP9.37□□□□□ -0.91
FKRP-220ENST00000600646 SNRKQ9NRH2 765 aa9.37□□□□□ -0.91
FKRP-220ENST00000600646 ZNF70Q9UC06 446 aaPredicted RBP9.37□□□□□ -0.91
FKRP-220ENST00000600646 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.37□□□□□ -0.91
FKRP-220ENST00000600646 ECM29Q5VYK3 1845 aa9.37□□□□□ -0.91
FKRP-220ENST00000600646 TRPM7Q96QT4 1865 aa9.36□□□□□ -0.91
FKRP-220ENST00000600646 IDH1O75874 414 aaKnown RBP9.36□□□□□ -0.91
FKRP-220ENST00000600646 ATP5JP18859 108 aa9.36□□□□□ -0.91
FKRP-220ENST00000600646 MECOMQ03112 1051 aa9.36□□□□□ -0.91
FKRP-220ENST00000600646 ANKRD45Q5TZF3 282 aa9.36□□□□□ -0.91
FKRP-220ENST00000600646 ZSCAN25Q6NSZ9 544 aa9.36□□□□□ -0.91
FKRP-220ENST00000600646 FAM83AQ86UY5 434 aa9.36□□□□□ -0.91
FKRP-220ENST00000600646 FAM163AQ96GL9 167 aaPredicted RBP9.36□□□□□ -0.91
FKRP-220ENST00000600646 HHIPL1Q96JK4 782 aa9.36□□□□□ -0.91
FKRP-220ENST00000600646 ECHDC1Q9NTX5 307 aa9.36□□□□□ -0.91
FKRP-220ENST00000600646 USP40Q9NVE5 1235 aa9.36□□□□□ -0.91
FKRP-220ENST00000600646 TLR7Q9NYK1 1049 aaKnown RBP9.36□□□□□ -0.91
FKRP-220ENST00000600646 TLL2Q9Y6L7 1015 aa9.36□□□□□ -0.91
FKRP-220ENST00000600646 MROH7-TTC4A0A0A0MT08 1334 aa9.35□□□□□ -0.91
FKRP-220ENST00000600646 TTC41PQ6P2S7 1318 aa9.35□□□□□ -0.91
FKRP-220ENST00000600646 TCP10L2B9ZVM9 353 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms